RNA–Protein interactions for RNA: ENST00000561208.5

MEIS2-222, Transcript of Meis homeobox 2, human

TSL 1 (best) BASIC

Gene MEIS2, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-222	ENST00000561208	CCER2	I3L3R5	266 aa		14.17	□□□□□ -0.14
MEIS2-222	ENST00000561208	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	14.17	□□□□□ -0.14
MEIS2-222	ENST00000561208	DEK	P35659	375 aa	Known RBP	14.17	□□□□□ -0.14
MEIS2-222	ENST00000561208	MTUS2	Q5JR59	1369 aa		14.16	□□□□□ -0.14
MEIS2-222	ENST00000561208	PPM1G	O15355	546 aa	Predicted RBP	14.15	□□□□□ -0.14
MEIS2-222	ENST00000561208	B4GALNT3	Q6L9W6	998 aa		14.14	□□□□□ -0.15
MEIS2-222	ENST00000561208	NEFM	P07197	916 aa		14.13	□□□□□ -0.15
MEIS2-222	ENST00000561208	HSP90AA1	P07900	732 aa	Known RBP	14.12	□□□□□ -0.15
MEIS2-222	ENST00000561208	ARX	Q96QS3	562 aa		14.12	□□□□□ -0.15
MEIS2-222	ENST00000561208	SOGA1	O94964	1423 aa		14.12	□□□□□ -0.15
MEIS2-222	ENST00000561208	RTN4	Q9NQC3	1192 aa	Known RBP	14.11	□□□□□ -0.15
MEIS2-222	ENST00000561208	TIMELESS	Q9UNS1	1208 aa		14.11	□□□□□ -0.15
MEIS2-222	ENST00000561208	CCNB3	Q8WWL7	1395 aa		14.11	□□□□□ -0.15
MEIS2-222	ENST00000561208	RRP7BP	Q9NSQ0	103 aa		14.1	□□□□□ -0.15
MEIS2-222	ENST00000561208	LAS1L	Q9Y4W2	734 aa	Known RBP	14.09	□□□□□ -0.15
MEIS2-222	ENST00000561208	VPS8	Q8N3P4	1428 aa		14.07	□□□□□ -0.16
MEIS2-222	ENST00000561208	WDR43	Q15061	677 aa	Known RBP eCLIP	14.07	□□□□□ -0.16
MEIS2-222	ENST00000561208	ERICH6B	Q5W0A0	696 aa		14.06	□□□□□ -0.16
MEIS2-222	ENST00000561208	SENP3-EIF4A1	A0A087X0R7	540 aa		14.06	□□□□□ -0.16
MEIS2-222	ENST00000561208	KDM2A	Q9Y2K7	1162 aa		14.05	□□□□□ -0.16
MEIS2-222	ENST00000561208	CECR2	Q9BXF3	1484 aa		14.04	□□□□□ -0.16
MEIS2-222	ENST00000561208	FBLN2	P98095	1184 aa		14.04	□□□□□ -0.16
MEIS2-222	ENST00000561208	BECN1	Q14457	450 aa		14.04	□□□□□ -0.16
MEIS2-222	ENST00000561208	KIF27	Q86VH2	1401 aa		13.99	□□□□□ -0.17
MEIS2-222	ENST00000561208	SETD5	Q9C0A6	1442 aa		13.97	□□□□□ -0.17
MEIS2-222	ENST00000561208	CCDC88B	A6NC98	1476 aa		13.97	□□□□□ -0.17
MEIS2-222	ENST00000561208	KANK4	Q5T7N3	995 aa	Predicted RBP	13.97	□□□□□ -0.17
MEIS2-222	ENST00000561208	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.95	□□□□□ -0.18
MEIS2-222	ENST00000561208	TRIM44	Q96DX7	344 aa	Predicted RBP	13.95	□□□□□ -0.18
MEIS2-222	ENST00000561208	KCNH8	Q96L42	1107 aa		13.94	□□□□□ -0.18
MEIS2-222	ENST00000561208	TSPY4	P0CV99	314 aa		13.93	□□□□□ -0.18
MEIS2-222	ENST00000561208	TSPY10	P0CW01	314 aa		13.93	□□□□□ -0.18
MEIS2-222	ENST00000561208	RAB3GAP2	Q9H2M9	1393 aa		13.93	□□□□□ -0.18
MEIS2-222	ENST00000561208	ABCC8	Q09428	1581 aa		13.92	□□□□□ -0.18
MEIS2-222	ENST00000561208	HSPA5	P11021	654 aa	Known RBP	13.91	□□□□□ -0.18
MEIS2-222	ENST00000561208	PPP1R15A	O75807	674 aa	Predicted RBP	13.91	□□□□□ -0.18
MEIS2-222	ENST00000561208	DHX57	Q6P158	1386 aa	Known RBP	13.9	□□□□□ -0.18
MEIS2-222	ENST00000561208	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
MEIS2-222	ENST00000561208	MROH2B	Q7Z745	1585 aa		13.9	□□□□□ -0.18
MEIS2-222	ENST00000561208	CARD11	Q9BXL7	1154 aa		13.9	□□□□□ -0.18
MEIS2-222	ENST00000561208	RGS3	P49796	1198 aa		13.89	□□□□□ -0.19
MEIS2-222	ENST00000561208	NACAD	O15069	1562 aa		13.89	□□□□□ -0.19
MEIS2-222	ENST00000561208	IPO9	Q96P70	1041 aa	Known RBP	13.88	□□□□□ -0.19
MEIS2-222	ENST00000561208	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.88	□□□□□ -0.19
MEIS2-222	ENST00000561208	FHAD1	B1AJZ9	1412 aa		13.86	□□□□□ -0.19
MEIS2-222	ENST00000561208	FANCI	Q9NVI1	1328 aa		13.86	□□□□□ -0.19
MEIS2-222	ENST00000561208	TCERG1	O14776	1098 aa	Known RBP	13.84	□□□□□ -0.19
MEIS2-222	ENST00000561208	GOLGA6L22	H0YM25	854 aa		13.84	□□□□□ -0.19
MEIS2-222	ENST00000561208	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.84	□□□□□ -0.19
MEIS2-222	ENST00000561208	SLC24A1	O60721	1099 aa		13.83	□□□□□ -0.19
MEIS2-222	ENST00000561208	CHGA	P10645	457 aa	Known RBP	13.83	□□□□□ -0.2
MEIS2-222	ENST00000561208	RGL3	Q3MIN7	710 aa		13.81	□□□□□ -0.2
MEIS2-222	ENST00000561208	KNSTRN	Q9Y448	316 aa		13.81	□□□□□ -0.2
MEIS2-222	ENST00000561208	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.79	□□□□□ -0.2
MEIS2-222	ENST00000561208	NUDC	Q9Y266	331 aa		13.79	□□□□□ -0.2
MEIS2-222	ENST00000561208	L1TD1	Q5T7N2	865 aa	Known RBP	13.79	□□□□□ -0.2
MEIS2-222	ENST00000561208	RCAN3	Q9UKA8	241 aa		13.77	□□□□□ -0.21
MEIS2-222	ENST00000561208	ARHGAP35	Q9NRY4	1499 aa		13.76	□□□□□ -0.21
MEIS2-222	ENST00000561208	MYH16	Q9H6N6	1097 aa		13.76	□□□□□ -0.21
MEIS2-222	ENST00000561208	CDCA8	Q53HL2	280 aa		13.76	□□□□□ -0.21
MEIS2-222	ENST00000561208	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.76	□□□□□ -0.21
MEIS2-222	ENST00000561208	CARMIL1	Q5VZK9	1371 aa		13.75	□□□□□ -0.21
MEIS2-222	ENST00000561208	CC2D1B	Q5T0F9	858 aa	Known RBP	13.75	□□□□□ -0.21
MEIS2-222	ENST00000561208	NCL	P19338	710 aa	Known RBP	13.75	□□□□□ -0.21
MEIS2-222	ENST00000561208	USP35	Q9P2H5	1018 aa		13.74	□□□□□ -0.21
MEIS2-222	ENST00000561208	FRAT1	Q92837	279 aa	Predicted RBP	13.72	□□□□□ -0.21
MEIS2-222	ENST00000561208	FTSJ3	Q8IY81	847 aa	Known RBP	13.72	□□□□□ -0.21
MEIS2-222	ENST00000561208	TNNT2	P45379	298 aa	Predicted RBP	13.7	□□□□□ -0.22
MEIS2-222	ENST00000561208	NEUROD2	Q15784	382 aa		13.7	□□□□□ -0.22
MEIS2-222	ENST00000561208	RUSC2	Q8N2Y8	1516 aa		13.7	□□□□□ -0.22
MEIS2-222	ENST00000561208	RAPGEF2	Q9Y4G8	1499 aa		13.7	□□□□□ -0.22
MEIS2-222	ENST00000561208	WIZ	O95785	1651 aa		13.7	□□□□□ -0.22
MEIS2-222	ENST00000561208	PTMA	P06454	111 aa	Known RBP	13.69	□□□□□ -0.22
MEIS2-222	ENST00000561208	CUX2	O14529	1486 aa		13.69	□□□□□ -0.22
MEIS2-222	ENST00000561208	PLEKHD1	A6NEE1	506 aa		13.69	□□□□□ -0.22
MEIS2-222	ENST00000561208	FOXD1	Q16676	465 aa		13.69	□□□□□ -0.22
MEIS2-222	ENST00000561208	CFAP53	Q96M91	514 aa		13.69	□□□□□ -0.22
MEIS2-222	ENST00000561208	MPHOSPH9	Q99550	1183 aa		13.68	□□□□□ -0.22
MEIS2-222	ENST00000561208	DCAF11	Q8TEB1	546 aa		13.68	□□□□□ -0.22
MEIS2-222	ENST00000561208	RALBP1	Q15311	655 aa		13.67	□□□□□ -0.22
MEIS2-222	ENST00000561208	ZBED9	Q6R2W3	1325 aa		13.67	□□□□□ -0.22
MEIS2-222	ENST00000561208	L3MBTL2	Q969R5	705 aa		13.67	□□□□□ -0.22
MEIS2-222	ENST00000561208	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.66	□□□□□ -0.22
MEIS2-222	ENST00000561208	PNN	Q9H307	717 aa	Known RBP	13.66	□□□□□ -0.22
MEIS2-222	ENST00000561208	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.66	□□□□□ -0.22
MEIS2-222	ENST00000561208	HSP90AB1	P08238	724 aa	Known RBP	13.66	□□□□□ -0.22
MEIS2-222	ENST00000561208	TOP2A	P11388	1531 aa	Known RBP	13.66	□□□□□ -0.22
MEIS2-222	ENST00000561208	KTN1	Q86UP2	1357 aa	Known RBP	13.66	□□□□□ -0.22
MEIS2-222	ENST00000561208	FMN1	Q68DA7	1419 aa		13.65	□□□□□ -0.22
MEIS2-222	ENST00000561208	TMF1	P82094	1093 aa		13.65	□□□□□ -0.22
MEIS2-222	ENST00000561208	HSCB	Q8IWL3	235 aa		13.65	□□□□□ -0.22
MEIS2-222	ENST00000561208	PDE4A	P27815	886 aa		13.65	□□□□□ -0.22
MEIS2-222	ENST00000561208	SLK	Q9H2G2	1235 aa	Predicted RBP	13.64	□□□□□ -0.23
MEIS2-222	ENST00000561208	PDE3B	Q13370	1112 aa		13.63	□□□□□ -0.23
MEIS2-222	ENST00000561208	SPRYD3	Q8NCJ5	442 aa		13.63	□□□□□ -0.23
MEIS2-222	ENST00000561208	MS4A1	P11836	297 aa		13.63	□□□□□ -0.23
MEIS2-222	ENST00000561208	GSE1	Q14687	1217 aa		13.62	□□□□□ -0.23
MEIS2-222	ENST00000561208	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.62	□□□□□ -0.23
MEIS2-222	ENST00000561208	PKD2	Q13563	968 aa		13.6	□□□□□ -0.23
MEIS2-222	ENST00000561208	MSN	P26038	577 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms