RNA–Protein interactions for RNA: ENST00000560999.1

CSHL1-209, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

Gene CSHL1, Length 1,602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-209ENST00000560999 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
CSHL1-209ENST00000560999 IGF1RP08069 1367 aa21.72■■□□□ 1.07
CSHL1-209ENST00000560999 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
CSHL1-209ENST00000560999 CUL7Q14999 1698 aa21.71■■□□□ 1.07
CSHL1-209ENST00000560999 JPH4Q96JJ6 628 aa21.69■■□□□ 1.06
CSHL1-209ENST00000560999 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
CSHL1-209ENST00000560999 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
CSHL1-209ENST00000560999 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.05
CSHL1-209ENST00000560999 KIF21BO75037 1637 aa21.55■■□□□ 1.04
CSHL1-209ENST00000560999 ADCY10Q96PN6 1610 aa21.53■■□□□ 1.04
CSHL1-209ENST00000560999 KIF13AQ9H1H9 1805 aa21.53■■□□□ 1.04
CSHL1-209ENST00000560999 PRXQ9BXM0 1461 aa21.5■■□□□ 1.03
CSHL1-209ENST00000560999 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
CSHL1-209ENST00000560999 TTBK1Q5TCY1 1321 aaPredicted RBP21.47■■□□□ 1.03
CSHL1-209ENST00000560999 IQGAP2Q13576 1575 aa21.47■■□□□ 1.03
CSHL1-209ENST00000560999 GOLGA3Q08378 1498 aa21.47■■□□□ 1.03
CSHL1-209ENST00000560999 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
CSHL1-209ENST00000560999 MAPKBP1O60336 1514 aa21.4■■□□□ 1.02
CSHL1-209ENST00000560999 DIP2BQ9P265 1576 aa21.39■■□□□ 1.01
CSHL1-209ENST00000560999 PTPRGP23470 1445 aa21.38■■□□□ 1.01
CSHL1-209ENST00000560999 NPM1P06748 294 aaKnown RBP eCLIP21.37■■□□□ 1.01
CSHL1-209ENST00000560999 ABCC10Q5T3U5 1492 aa21.37■■□□□ 1.01
CSHL1-209ENST00000560999 DISP1Q96F81 1524 aa21.37■■□□□ 1.01
CSHL1-209ENST00000560999 CARMIL2Q6F5E8 1435 aa21.36■■□□□ 1.01
CSHL1-209ENST00000560999 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
CSHL1-209ENST00000560999 FAM69CQ0P6D2 419 aa21.34■■□□□ 1.01
CSHL1-209ENST00000560999 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
CSHL1-209ENST00000560999 CTTNBP2Q8WZ74 1663 aa21.31■■□□□ 1
CSHL1-209ENST00000560999 UGGT2Q9NYU1 1516 aa21.31■■□□□ 1
CSHL1-209ENST00000560999 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
CSHL1-209ENST00000560999 KIAA0556O60303 1618 aa21.3■■□□□ 1
CSHL1-209ENST00000560999 ABCC2Q92887 1545 aa21.27■■□□□ 1
CSHL1-209ENST00000560999 TSPOAP1O95153 1857 aa21.27■■□□□ 1
CSHL1-209ENST00000560999 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
CSHL1-209ENST00000560999 UHRF1BP1LA0JNW5 1464 aa21.21■□□□□ 0.99
CSHL1-209ENST00000560999 ASXL2Q76L83 1435 aa21.21■□□□□ 0.99
CSHL1-209ENST00000560999 ZCCHC11Q5TAX3 1644 aaKnown RBP21.18■□□□□ 0.98
CSHL1-209ENST00000560999 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
CSHL1-209ENST00000560999 KDM6BO15054 1643 aa21.16■□□□□ 0.98
CSHL1-209ENST00000560999 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
CSHL1-209ENST00000560999 KDM5BQ9UGL1 1544 aa21.14■□□□□ 0.98
CSHL1-209ENST00000560999 PPRC1Q5VV67 1664 aaKnown RBP21.13■□□□□ 0.97
CSHL1-209ENST00000560999 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
CSHL1-209ENST00000560999 GLI2P10070 1586 aa21.09■□□□□ 0.97
CSHL1-209ENST00000560999 CLIP1P30622 1438 aa21.08■□□□□ 0.97
CSHL1-209ENST00000560999 EPRSP07814 1512 aaKnown RBP21.08■□□□□ 0.96
CSHL1-209ENST00000560999 ABCA8O94911 1581 aa21.07■□□□□ 0.96
CSHL1-209ENST00000560999 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
CSHL1-209ENST00000560999 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
CSHL1-209ENST00000560999 WDR7Q9Y4E6 1490 aa21.01■□□□□ 0.95
CSHL1-209ENST00000560999 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
CSHL1-209ENST00000560999 ARID3CA6NKF2 412 aa20.99■□□□□ 0.95
CSHL1-209ENST00000560999 SAMD9Q5K651 1589 aa20.99■□□□□ 0.95
CSHL1-209ENST00000560999 ARHGAP35Q9NRY4 1499 aa20.98■□□□□ 0.95
CSHL1-209ENST00000560999 COL17A1Q9UMD9 1497 aaPredicted RBP20.96■□□□□ 0.95
CSHL1-209ENST00000560999 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
CSHL1-209ENST00000560999 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
CSHL1-209ENST00000560999 TEX14Q8IWB6 1497 aa20.9■□□□□ 0.94
CSHL1-209ENST00000560999 CFAP43Q8NDM7 1665 aa20.89■□□□□ 0.93
CSHL1-209ENST00000560999 ATP10BO94823 1461 aa20.88■□□□□ 0.93
CSHL1-209ENST00000560999 RAPGEF6Q8TEU7 1601 aa20.88■□□□□ 0.93
CSHL1-209ENST00000560999 TRIM26Q12899 539 aaPredicted RBP20.88■□□□□ 0.93
CSHL1-209ENST00000560999 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
CSHL1-209ENST00000560999 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
CSHL1-209ENST00000560999 KDM4FA0A1W2PPD8 638 aa20.87■□□□□ 0.93
CSHL1-209ENST00000560999 CD109Q6YHK3 1445 aa20.85■□□□□ 0.93
CSHL1-209ENST00000560999 MAGI3Q5TCQ9 1506 aa20.81■□□□□ 0.92
CSHL1-209ENST00000560999 NUP153P49790 1475 aaKnown RBP20.81■□□□□ 0.92
CSHL1-209ENST00000560999 PCGF6Q9BYE7 350 aa20.79■□□□□ 0.92
CSHL1-209ENST00000560999 ADGRL1O94910 1474 aa20.77■□□□□ 0.92
CSHL1-209ENST00000560999 FMN1Q68DA7 1419 aa20.77■□□□□ 0.91
CSHL1-209ENST00000560999 ABCA9Q8IUA7 1624 aa20.76■□□□□ 0.91
CSHL1-209ENST00000560999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
CSHL1-209ENST00000560999 HNRNPUL2Q1KMD3 747 aaKnown RBP20.75■□□□□ 0.91
CSHL1-209ENST00000560999 PCF11O94913 1555 aaKnown RBP20.69■□□□□ 0.9
CSHL1-209ENST00000560999 HRCP23327 699 aa20.68■□□□□ 0.9
CSHL1-209ENST00000560999 CASKIN1Q8WXD9 1431 aa20.68■□□□□ 0.9
CSHL1-209ENST00000560999 FYCO1Q9BQS8 1478 aa20.68■□□□□ 0.9
CSHL1-209ENST00000560999 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
CSHL1-209ENST00000560999 ARAP3Q8WWN8 1544 aa20.64■□□□□ 0.9
CSHL1-209ENST00000560999 MAP3K1Q13233 1512 aa20.62■□□□□ 0.89
CSHL1-209ENST00000560999 APLP2Q06481 763 aa20.61■□□□□ 0.89
CSHL1-209ENST00000560999 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
CSHL1-209ENST00000560999 HECW1Q76N89 1606 aa20.6■□□□□ 0.89
CSHL1-209ENST00000560999 FRMPD1Q5SYB0 1578 aa20.6■□□□□ 0.89
CSHL1-209ENST00000560999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.6■□□□□ 0.89
CSHL1-209ENST00000560999 RAPGEF3O95398 923 aa20.58■□□□□ 0.89
CSHL1-209ENST00000560999 NEO1Q92859 1461 aa20.58■□□□□ 0.88
CSHL1-209ENST00000560999 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
CSHL1-209ENST00000560999 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
CSHL1-209ENST00000560999 ATP1B4Q9UN42 357 aaPredicted RBP20.56■□□□□ 0.88
CSHL1-209ENST00000560999 LRRIQ1Q96JM4 1722 aa20.56■□□□□ 0.88
CSHL1-209ENST00000560999 CCDC18Q5T9S5 1454 aa20.53■□□□□ 0.88
CSHL1-209ENST00000560999 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
CSHL1-209ENST00000560999 FANCAO15360 1455 aa20.51■□□□□ 0.87
CSHL1-209ENST00000560999 RICTORQ6R327 1708 aa20.5■□□□□ 0.87
CSHL1-209ENST00000560999 KIF14Q15058 1648 aa20.49■□□□□ 0.87
CSHL1-209ENST00000560999 AKNAQ7Z591 1439 aa20.49■□□□□ 0.87
CSHL1-209ENST00000560999 CFAP74Q9C0B2 1584 aa20.48■□□□□ 0.87
CSHL1-209ENST00000560999 HECW2Q9P2P5 1572 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms