RNA–Protein interactions for RNA: ENST00000560980.5

LRRC49-226, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 1,443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-226ENST00000560980 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
LRRC49-226ENST00000560980 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
LRRC49-226ENST00000560980 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
LRRC49-226ENST00000560980 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
LRRC49-226ENST00000560980 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
LRRC49-226ENST00000560980 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
LRRC49-226ENST00000560980 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
LRRC49-226ENST00000560980 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
LRRC49-226ENST00000560980 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
LRRC49-226ENST00000560980 MROH2BQ7Z745 1585 aa11.46□□□□□ -0.58
LRRC49-226ENST00000560980 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
LRRC49-226ENST00000560980 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
LRRC49-226ENST00000560980 GABBR2O75899 941 aa11.43□□□□□ -0.58
LRRC49-226ENST00000560980 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
LRRC49-226ENST00000560980 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
LRRC49-226ENST00000560980 SUPT5HO00267 1087 aaKnown RBP11.42□□□□□ -0.58
LRRC49-226ENST00000560980 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
LRRC49-226ENST00000560980 WIZO95785 1651 aa11.4□□□□□ -0.58
LRRC49-226ENST00000560980 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
LRRC49-226ENST00000560980 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
LRRC49-226ENST00000560980 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
LRRC49-226ENST00000560980 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
LRRC49-226ENST00000560980 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
LRRC49-226ENST00000560980 PKD2Q13563 968 aa11.33□□□□□ -0.6
LRRC49-226ENST00000560980 SMARCA2P51531 1590 aa11.31□□□□□ -0.6
LRRC49-226ENST00000560980 TOP2AP11388 1531 aaKnown RBP11.31□□□□□ -0.6
LRRC49-226ENST00000560980 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
LRRC49-226ENST00000560980 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
LRRC49-226ENST00000560980 NUBP1P53384 320 aa11.29□□□□□ -0.6
LRRC49-226ENST00000560980 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
LRRC49-226ENST00000560980 POTEMA6NI47 508 aa11.27□□□□□ -0.6
LRRC49-226ENST00000560980 GSE1Q14687 1217 aa11.27□□□□□ -0.6
LRRC49-226ENST00000560980 FAM212AQ96EL1 285 aa11.27□□□□□ -0.6
LRRC49-226ENST00000560980 ATAD2BQ9ULI0 1458 aa11.25□□□□□ -0.61
LRRC49-226ENST00000560980 CLCN6P51797 869 aa11.24□□□□□ -0.61
LRRC49-226ENST00000560980 HMGXB3Q12766 1538 aa11.24□□□□□ -0.61
LRRC49-226ENST00000560980 POTEIP0CG38 1075 aa11.23□□□□□ -0.61
LRRC49-226ENST00000560980 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
LRRC49-226ENST00000560980 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
LRRC49-226ENST00000560980 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
LRRC49-226ENST00000560980 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
LRRC49-226ENST00000560980 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
LRRC49-226ENST00000560980 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
LRRC49-226ENST00000560980 BAZ1BQ9UIG0 1483 aaKnown RBP11.18□□□□□ -0.62
LRRC49-226ENST00000560980 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
LRRC49-226ENST00000560980 CC2D2AQ9P2K1 1620 aa11.16□□□□□ -0.62
LRRC49-226ENST00000560980 RGL2O15211 777 aa11.14□□□□□ -0.63
LRRC49-226ENST00000560980 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
LRRC49-226ENST00000560980 CCDC88BA6NC98 1476 aa11.11□□□□□ -0.63
LRRC49-226ENST00000560980 PYGBP11216 843 aa11.09□□□□□ -0.63
LRRC49-226ENST00000560980 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
LRRC49-226ENST00000560980 GALR2O43603 387 aaPredicted RBP11.08□□□□□ -0.64
LRRC49-226ENST00000560980 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
LRRC49-226ENST00000560980 PHF12Q96QT6 1004 aa11.05□□□□□ -0.64
LRRC49-226ENST00000560980 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
LRRC49-226ENST00000560980 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
LRRC49-226ENST00000560980 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.64
LRRC49-226ENST00000560980 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.64
LRRC49-226ENST00000560980 RNF25Q96BH1 459 aaPredicted RBP11.01□□□□□ -0.65
LRRC49-226ENST00000560980 CCDC61Q9Y6R9 512 aa11.01□□□□□ -0.65
LRRC49-226ENST00000560980 CHGAP10645 457 aaKnown RBP10.99□□□□□ -0.65
LRRC49-226ENST00000560980 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
LRRC49-226ENST00000560980 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
LRRC49-226ENST00000560980 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
LRRC49-226ENST00000560980 CFTRP13569 1480 aa10.92□□□□□ -0.66
LRRC49-226ENST00000560980 OTUD5Q96G74 571 aa10.92□□□□□ -0.66
LRRC49-226ENST00000560980 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
LRRC49-226ENST00000560980 STK25O00506 426 aa10.91□□□□□ -0.66
LRRC49-226ENST00000560980 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
LRRC49-226ENST00000560980 MS4A3Q96HJ5 214 aa10.91□□□□□ -0.66
LRRC49-226ENST00000560980 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.66
LRRC49-226ENST00000560980 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
LRRC49-226ENST00000560980 MAP3K13O43283 966 aa10.89□□□□□ -0.67
LRRC49-226ENST00000560980 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
LRRC49-226ENST00000560980 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
LRRC49-226ENST00000560980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
LRRC49-226ENST00000560980 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
LRRC49-226ENST00000560980 LAMC3Q9Y6N6 1575 aa10.88□□□□□ -0.67
LRRC49-226ENST00000560980 SGIP1Q9BQI5 828 aa10.87□□□□□ -0.67
LRRC49-226ENST00000560980 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
LRRC49-226ENST00000560980 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
LRRC49-226ENST00000560980 ABCC8Q09428 1581 aa10.86□□□□□ -0.67
LRRC49-226ENST00000560980 BIVM-ERCC5R4GMW8 1640 aa10.85□□□□□ -0.67
LRRC49-226ENST00000560980 POTEB2H3BUK9 544 aa10.85□□□□□ -0.67
LRRC49-226ENST00000560980 HAP1P54257 671 aaPredicted RBP10.85□□□□□ -0.67
LRRC49-226ENST00000560980 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
LRRC49-226ENST00000560980 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
LRRC49-226ENST00000560980 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
LRRC49-226ENST00000560980 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
LRRC49-226ENST00000560980 ATMINO43313 823 aaPredicted RBP10.84□□□□□ -0.67
LRRC49-226ENST00000560980 TOP2BQ02880 1626 aa10.82□□□□□ -0.68
LRRC49-226ENST00000560980 PSEN1P49768 467 aa10.82□□□□□ -0.68
LRRC49-226ENST00000560980 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
LRRC49-226ENST00000560980 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
LRRC49-226ENST00000560980 WRNQ14191 1432 aaPredicted RBP eCLIP10.82□□□□□ -0.68
LRRC49-226ENST00000560980 SYNJ1O43426 1573 aa10.8□□□□□ -0.68
LRRC49-226ENST00000560980 SPRYD3Q8NCJ5 442 aa10.78□□□□□ -0.68
LRRC49-226ENST00000560980 SLC39A7Q92504 469 aa10.75□□□□□ -0.69
LRRC49-226ENST00000560980 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
LRRC49-226ENST00000560980 C7P10643 843 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms