RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.25
CPNE6-218ENST00000560845 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.26
CPNE6-218ENST00000560845 ABCC10Q5T3U5 1492 aa13.42□□□□□ -0.26
CPNE6-218ENST00000560845 MAPKBP1O60336 1514 aa13.41□□□□□ -0.26
CPNE6-218ENST00000560845 FAM69CQ0P6D2 419 aa13.4□□□□□ -0.26
CPNE6-218ENST00000560845 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
CPNE6-218ENST00000560845 DIP2BQ9P265 1576 aa13.38□□□□□ -0.27
CPNE6-218ENST00000560845 ADCY10Q96PN6 1610 aa13.38□□□□□ -0.27
CPNE6-218ENST00000560845 KIAA0586Q9BVV6 1533 aa13.36□□□□□ -0.27
CPNE6-218ENST00000560845 IGF1RP08069 1367 aa13.33□□□□□ -0.27
CPNE6-218ENST00000560845 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
CPNE6-218ENST00000560845 CUL7Q14999 1698 aa13.31□□□□□ -0.28
CPNE6-218ENST00000560845 KDM6BO15054 1643 aa13.31□□□□□ -0.28
CPNE6-218ENST00000560845 PTPRGP23470 1445 aa13.28□□□□□ -0.28
CPNE6-218ENST00000560845 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
CPNE6-218ENST00000560845 ABCC2Q92887 1545 aa13.24□□□□□ -0.29
CPNE6-218ENST00000560845 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
CPNE6-218ENST00000560845 TNIKQ9UKE5 1360 aa13.24□□□□□ -0.29
CPNE6-218ENST00000560845 CARMIL2Q6F5E8 1435 aa13.23□□□□□ -0.29
CPNE6-218ENST00000560845 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
CPNE6-218ENST00000560845 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
CPNE6-218ENST00000560845 EEA1Q15075 1411 aa13.22□□□□□ -0.29
CPNE6-218ENST00000560845 ASXL2Q76L83 1435 aa13.21□□□□□ -0.3
CPNE6-218ENST00000560845 IQGAP2Q13576 1575 aa13.2□□□□□ -0.3
CPNE6-218ENST00000560845 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
CPNE6-218ENST00000560845 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
CPNE6-218ENST00000560845 UHRF1BP1LA0JNW5 1464 aa13.19□□□□□ -0.3
CPNE6-218ENST00000560845 GLI2P10070 1586 aa13.19□□□□□ -0.3
CPNE6-218ENST00000560845 UACAQ9BZF9 1416 aa13.17□□□□□ -0.3
CPNE6-218ENST00000560845 PPRC1Q5VV67 1664 aaKnown RBP13.16□□□□□ -0.3
CPNE6-218ENST00000560845 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
CPNE6-218ENST00000560845 ADGRL1O94910 1474 aa13.13□□□□□ -0.31
CPNE6-218ENST00000560845 EPRSP07814 1512 aaKnown RBP13.13□□□□□ -0.31
CPNE6-218ENST00000560845 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
CPNE6-218ENST00000560845 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
CPNE6-218ENST00000560845 COL17A1Q9UMD9 1497 aaPredicted RBP13.11□□□□□ -0.31
CPNE6-218ENST00000560845 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
CPNE6-218ENST00000560845 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
CPNE6-218ENST00000560845 MAP3K4Q9Y6R4 1608 aa13.1□□□□□ -0.31
CPNE6-218ENST00000560845 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
CPNE6-218ENST00000560845 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
CPNE6-218ENST00000560845 ZCCHC11Q5TAX3 1644 aaKnown RBP13.08□□□□□ -0.32
CPNE6-218ENST00000560845 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
CPNE6-218ENST00000560845 KIF21BO75037 1637 aa13.06□□□□□ -0.32
CPNE6-218ENST00000560845 WDR7Q9Y4E6 1490 aa13.05□□□□□ -0.32
CPNE6-218ENST00000560845 ILDR1Q86SU0 546 aaPredicted RBP13.05□□□□□ -0.32
CPNE6-218ENST00000560845 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
CPNE6-218ENST00000560845 HECW2Q9P2P5 1572 aa13□□□□□ -0.33
CPNE6-218ENST00000560845 PRXQ9BXM0 1461 aa13□□□□□ -0.33
CPNE6-218ENST00000560845 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
CPNE6-218ENST00000560845 MAGI3Q5TCQ9 1506 aa12.99□□□□□ -0.33
CPNE6-218ENST00000560845 ABCA8O94911 1581 aa12.98□□□□□ -0.33
CPNE6-218ENST00000560845 CD109Q6YHK3 1445 aa12.98□□□□□ -0.33
CPNE6-218ENST00000560845 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.33
CPNE6-218ENST00000560845 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.34
CPNE6-218ENST00000560845 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
CPNE6-218ENST00000560845 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
CPNE6-218ENST00000560845 ARAP3Q8WWN8 1544 aa12.89□□□□□ -0.35
CPNE6-218ENST00000560845 ARID3CA6NKF2 412 aa12.88□□□□□ -0.35
CPNE6-218ENST00000560845 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
CPNE6-218ENST00000560845 ATP10BO94823 1461 aa12.87□□□□□ -0.35
CPNE6-218ENST00000560845 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
CPNE6-218ENST00000560845 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
CPNE6-218ENST00000560845 PHLDB1Q86UU1 1377 aa12.83□□□□□ -0.36
CPNE6-218ENST00000560845 PTPRMP28827 1452 aa12.81□□□□□ -0.36
CPNE6-218ENST00000560845 NEO1Q92859 1461 aa12.81□□□□□ -0.36
CPNE6-218ENST00000560845 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
CPNE6-218ENST00000560845 CLIP1P30622 1438 aa12.8□□□□□ -0.36
CPNE6-218ENST00000560845 RAPGEF3O95398 923 aa12.8□□□□□ -0.36
CPNE6-218ENST00000560845 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
CPNE6-218ENST00000560845 RAPGEF6Q8TEU7 1601 aa12.79□□□□□ -0.36
CPNE6-218ENST00000560845 FRMPD1Q5SYB0 1578 aa12.78□□□□□ -0.36
CPNE6-218ENST00000560845 NUP153P49790 1475 aaKnown RBP12.77□□□□□ -0.37
CPNE6-218ENST00000560845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
CPNE6-218ENST00000560845 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
CPNE6-218ENST00000560845 FBXO41Q8TF61 875 aa12.76□□□□□ -0.37
CPNE6-218ENST00000560845 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
CPNE6-218ENST00000560845 MADDQ8WXG6 1647 aa12.74□□□□□ -0.37
CPNE6-218ENST00000560845 ARHGEF40Q8TER5 1519 aa12.74□□□□□ -0.37
CPNE6-218ENST00000560845 ARID4BQ4LE39 1312 aaPredicted RBP12.74□□□□□ -0.37
CPNE6-218ENST00000560845 PCF11O94913 1555 aaKnown RBP12.73□□□□□ -0.37
CPNE6-218ENST00000560845 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
CPNE6-218ENST00000560845 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
CPNE6-218ENST00000560845 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
CPNE6-218ENST00000560845 RANGAP1P46060 587 aaPredicted RBP12.71□□□□□ -0.37
CPNE6-218ENST00000560845 EFCAB5A4FU69 1503 aa12.7□□□□□ -0.38
CPNE6-218ENST00000560845 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
CPNE6-218ENST00000560845 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
CPNE6-218ENST00000560845 PLEKHD1A6NEE1 506 aa12.69□□□□□ -0.38
CPNE6-218ENST00000560845 FANCAO15360 1455 aa12.69□□□□□ -0.38
CPNE6-218ENST00000560845 VPS8Q8N3P4 1428 aa12.68□□□□□ -0.38
CPNE6-218ENST00000560845 CFAP74Q9C0B2 1584 aa12.68□□□□□ -0.38
CPNE6-218ENST00000560845 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
CPNE6-218ENST00000560845 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
CPNE6-218ENST00000560845 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
CPNE6-218ENST00000560845 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
CPNE6-218ENST00000560845 TTC37Q6PGP7 1564 aa12.66□□□□□ -0.38
CPNE6-218ENST00000560845 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
CPNE6-218ENST00000560845 YEATS2Q9ULM3 1422 aa12.65□□□□□ -0.38
CPNE6-218ENST00000560845 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms