RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 PCGF6Q9BYE7 350 aa36.79■■■■□ 3.48
TM2D3-209ENST00000560013 SNAPC4Q5SXM2 1469 aa36.73■■■■□ 3.47
TM2D3-209ENST00000560013 PPARGC1BQ86YN6 1023 aaKnown RBP36.71■■■■□ 3.47
TM2D3-209ENST00000560013 MAGI1Q96QZ7 1491 aaPredicted RBP36.67■■■■□ 3.46
TM2D3-209ENST00000560013 EFCAB5A4FU69 1503 aa36.61■■■■□ 3.45
TM2D3-209ENST00000560013 GRIN2AQ12879 1464 aa36.54■■■■□ 3.44
TM2D3-209ENST00000560013 APLP2Q06481 763 aa36.54■■■■□ 3.44
TM2D3-209ENST00000560013 SYNJ2O15056 1496 aa36.53■■■■□ 3.44
TM2D3-209ENST00000560013 IQGAP2Q13576 1575 aa36.47■■■■□ 3.43
TM2D3-209ENST00000560013 P3H3Q8IVL6 736 aa36.46■■■■□ 3.43
TM2D3-209ENST00000560013 CHMP7Q8WUX9 453 aaPredicted RBP36.46■■■■□ 3.43
TM2D3-209ENST00000560013 SAMD9Q5K651 1589 aa36.46■■■■□ 3.43
TM2D3-209ENST00000560013 FHOD3Q2V2M9 1422 aa36.42■■■■□ 3.42
TM2D3-209ENST00000560013 TTBK1Q5TCY1 1321 aaPredicted RBP36.4■■■■□ 3.42
TM2D3-209ENST00000560013 KIAA0586Q9BVV6 1533 aa36.39■■■■□ 3.42
TM2D3-209ENST00000560013 FBLN2P98095 1184 aa36.35■■■■□ 3.41
TM2D3-209ENST00000560013 CEP170Q5SW79 1584 aa36.3■■■■□ 3.4
TM2D3-209ENST00000560013 UGGT2Q9NYU1 1516 aa36.29■■■■□ 3.4
TM2D3-209ENST00000560013 FMN1Q68DA7 1419 aa36.29■■■■□ 3.4
TM2D3-209ENST00000560013 PCF11O94913 1555 aaKnown RBP36.27■■■■□ 3.4
TM2D3-209ENST00000560013 NUP160Q12769 1436 aa36.26■■■■□ 3.4
TM2D3-209ENST00000560013 MAP3K1Q13233 1512 aa36.23■■■■□ 3.39
TM2D3-209ENST00000560013 CASKIN1Q8WXD9 1431 aa36.21■■■■□ 3.39
TM2D3-209ENST00000560013 FYCO1Q9BQS8 1478 aa36.2■■■■□ 3.39
TM2D3-209ENST00000560013 KANK4Q5T7N3 995 aaPredicted RBP36.17■■■■□ 3.38
TM2D3-209ENST00000560013 TIAM1Q13009 1591 aa36.17■■■■□ 3.38
TM2D3-209ENST00000560013 CHD1O14646 1710 aa36.15■■■■□ 3.38
TM2D3-209ENST00000560013 KIAA0556O60303 1618 aa36.1■■■■□ 3.37
TM2D3-209ENST00000560013 DISP1Q96F81 1524 aa36.1■■■■□ 3.37
TM2D3-209ENST00000560013 ATP1B4Q9UN42 357 aaPredicted RBP36.09■■■■□ 3.37
TM2D3-209ENST00000560013 CFAP43Q8NDM7 1665 aa36.09■■■■□ 3.37
TM2D3-209ENST00000560013 JPH4Q96JJ6 628 aa36.03■■■■□ 3.36
TM2D3-209ENST00000560013 LRRC9Q6ZRR7 1453 aa36■■■■□ 3.35
TM2D3-209ENST00000560013 LRRIQ1Q96JM4 1722 aa35.95■■■■□ 3.35
TM2D3-209ENST00000560013 CARMIL2Q6F5E8 1435 aa35.94■■■■□ 3.34
TM2D3-209ENST00000560013 HECW1Q76N89 1606 aa35.9■■■■□ 3.34
TM2D3-209ENST00000560013 CCDC18Q5T9S5 1454 aa35.83■■■■□ 3.33
TM2D3-209ENST00000560013 RRBP1Q9P2E9 1410 aaKnown RBP35.78■■■■□ 3.32
TM2D3-209ENST00000560013 RAPGEF6Q8TEU7 1601 aa35.77■■■■□ 3.32
TM2D3-209ENST00000560013 SHROOM2Q13796 1616 aa35.77■■■■□ 3.32
TM2D3-209ENST00000560013 EPRSP07814 1512 aaKnown RBP35.77■■■■□ 3.32
TM2D3-209ENST00000560013 PRG4Q92954 1404 aaPredicted RBP35.76■■■■□ 3.32
TM2D3-209ENST00000560013 HRCP23327 699 aa35.75■■■■□ 3.31
TM2D3-209ENST00000560013 MTUS2Q5JR59 1369 aa35.73■■■■□ 3.31
TM2D3-209ENST00000560013 CLASP1Q7Z460 1538 aa35.69■■■■□ 3.3
TM2D3-209ENST00000560013 PHLDB1Q86UU1 1377 aa35.67■■■■□ 3.3
TM2D3-209ENST00000560013 EHBP1L1Q8N3D4 1523 aa35.67■■■■□ 3.3
TM2D3-209ENST00000560013 NUP153P49790 1475 aaKnown RBP35.67■■■■□ 3.3
TM2D3-209ENST00000560013 CCNB3Q8WWL7 1395 aa35.66■■■■□ 3.3
TM2D3-209ENST00000560013 CDK13Q14004 1512 aaKnown RBP35.65■■■■□ 3.3
TM2D3-209ENST00000560013 PLB1Q6P1J6 1458 aa35.64■■■■□ 3.3
TM2D3-209ENST00000560013 HNRNPUL2Q1KMD3 747 aaKnown RBP35.63■■■■□ 3.29
TM2D3-209ENST00000560013 MAGI3Q5TCQ9 1506 aa35.62■■■■□ 3.29
TM2D3-209ENST00000560013 SUPT6HQ7KZ85 1726 aaKnown RBP35.6■■■■□ 3.29
TM2D3-209ENST00000560013 ABCA8O94911 1581 aa35.57■■■■□ 3.29
TM2D3-209ENST00000560013 ARID3CA6NKF2 412 aa35.56■■■■□ 3.28
TM2D3-209ENST00000560013 PTPRGP23470 1445 aa35.56■■■■□ 3.28
TM2D3-209ENST00000560013 NCOA2Q15596 1464 aa35.53■■■■□ 3.28
TM2D3-209ENST00000560013 ERCC6L2Q5T890 1561 aa35.49■■■■□ 3.27
TM2D3-209ENST00000560013 ARHGEF11O15085 1522 aa35.48■■■■□ 3.27
TM2D3-209ENST00000560013 CDK11AQ9UQ88 783 aaPredicted RBP35.48■■■■□ 3.27
TM2D3-209ENST00000560013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.46■■■■□ 3.27
TM2D3-209ENST00000560013 FGD6Q6ZV73 1430 aa35.42■■■■□ 3.26
TM2D3-209ENST00000560013 MYOM3Q5VTT5 1437 aa35.41■■■■□ 3.26
TM2D3-209ENST00000560013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.39■■■■□ 3.26
TM2D3-209ENST00000560013 FAM50AQ14320 339 aaKnown RBP35.38■■■■□ 3.25
TM2D3-209ENST00000560013 UACAQ9BZF9 1416 aa35.36■■■■□ 3.25
TM2D3-209ENST00000560013 ATP10BO94823 1461 aa35.35■■■■□ 3.25
TM2D3-209ENST00000560013 OSCARQ8IYS5 282 aa35.35■■■■□ 3.25
TM2D3-209ENST00000560013 ZEB1P37275 1124 aaPredicted RBP35.34■■■■□ 3.25
TM2D3-209ENST00000560013 TROQ12816 1431 aaPredicted RBP35.33■■■■□ 3.25
TM2D3-209ENST00000560013 CCER1Q8TC90 406 aaPredicted RBP35.33■■■■□ 3.25
TM2D3-209ENST00000560013 ITGAEP38570 1179 aa35.32■■■■□ 3.24
TM2D3-209ENST00000560013 ADCY10Q96PN6 1610 aa35.25■■■■□ 3.23
TM2D3-209ENST00000560013 ABCC2Q92887 1545 aa35.24■■■■□ 3.23
TM2D3-209ENST00000560013 PTPN23Q9H3S7 1636 aa35.24■■■■□ 3.23
TM2D3-209ENST00000560013 PLEKHD1A6NEE1 506 aa35.24■■■■□ 3.23
TM2D3-209ENST00000560013 MIA2Q96PC5 1412 aa35.22■■■■□ 3.23
TM2D3-209ENST00000560013 TCOF1Q13428 1488 aaKnown RBP35.17■■■■□ 3.22
TM2D3-209ENST00000560013 KIF14Q15058 1648 aa35.17■■■■□ 3.22
TM2D3-209ENST00000560013 UHRF1BP1LA0JNW5 1464 aa35.15■■■■□ 3.22
TM2D3-209ENST00000560013 ITSN2Q9NZM3 1697 aa35.09■■■■□ 3.21
TM2D3-209ENST00000560013 SETD5Q9C0A6 1442 aa35.04■■■■□ 3.2
TM2D3-209ENST00000560013 GPATCH8Q9UKJ3 1502 aaKnown RBP35.03■■■■□ 3.2
TM2D3-209ENST00000560013 KDM5BQ9UGL1 1544 aa35.02■■■■□ 3.2
TM2D3-209ENST00000560013 ZCCHC11Q5TAX3 1644 aaKnown RBP35.02■■■■□ 3.2
TM2D3-209ENST00000560013 ABCC10Q5T3U5 1492 aa35.02■■■■□ 3.2
TM2D3-209ENST00000560013 PTPRKQ15262 1439 aa35■■■■□ 3.19
TM2D3-209ENST00000560013 RAB3GAP2Q9H2M9 1393 aa35■■■■□ 3.19
TM2D3-209ENST00000560013 CDC42BPAQ5VT25 1732 aa34.98■■■■□ 3.19
TM2D3-209ENST00000560013 CFDP1Q9UEE9 299 aaPredicted RBP34.97■■■■□ 3.19
TM2D3-209ENST00000560013 DHX57Q6P158 1386 aaKnown RBP34.91■■■■□ 3.18
TM2D3-209ENST00000560013 ZNF644Q9H582 1327 aaPredicted RBP34.9■■■■□ 3.18
TM2D3-209ENST00000560013 CAMSAP2Q08AD1 1489 aa34.88■■■■□ 3.17
TM2D3-209ENST00000560013 HFM1A2PYH4 1435 aa34.87■■■■□ 3.17
TM2D3-209ENST00000560013 DNMT1P26358 1616 aaKnown RBP34.87■■■■□ 3.17
TM2D3-209ENST00000560013 DAPK1P53355 1430 aa34.83■■■■□ 3.17
TM2D3-209ENST00000560013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.82■■■■□ 3.164e-8■■■■□ 20.7
TM2D3-209ENST00000560013 CLSPNQ9HAW4 1339 aa34.81■■■■□ 3.16
TM2D3-209ENST00000560013 ZNF777Q9ULD5 760 aaPredicted RBP34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms