RNA–Protein interactions for RNA: ENST00000559880.5

SLTM-220, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-220ENST00000559880 TRIM41Q8WV44 630 aa18.1■□□□□ 0.49
SLTM-220ENST00000559880 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
SLTM-220ENST00000559880 KIF27Q86VH2 1401 aa18.08■□□□□ 0.49
SLTM-220ENST00000559880 NPM3O75607 178 aaKnown RBP18.06■□□□□ 0.48
SLTM-220ENST00000559880 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
SLTM-220ENST00000559880 IGF1RP08069 1367 aa18.04■□□□□ 0.48
SLTM-220ENST00000559880 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
SLTM-220ENST00000559880 GRIN2AQ12879 1464 aa18.02■□□□□ 0.48
SLTM-220ENST00000559880 KCNA4P22459 653 aa18.01■□□□□ 0.47
SLTM-220ENST00000559880 CLASP1Q7Z460 1538 aa17.99■□□□□ 0.47
SLTM-220ENST00000559880 CEP170Q5SW79 1584 aa17.96■□□□□ 0.46
SLTM-220ENST00000559880 RIMBP3CA6NJZ7 1639 aa17.95■□□□□ 0.46
SLTM-220ENST00000559880 RIMBP3BA6NNM3 1639 aa17.95■□□□□ 0.46
SLTM-220ENST00000559880 RIMBP3Q9UFD9 1639 aa17.95■□□□□ 0.46
SLTM-220ENST00000559880 NUP160Q12769 1436 aa17.95■□□□□ 0.46
SLTM-220ENST00000559880 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
SLTM-220ENST00000559880 CUL7Q14999 1698 aa17.93■□□□□ 0.46
SLTM-220ENST00000559880 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
SLTM-220ENST00000559880 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
SLTM-220ENST00000559880 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
SLTM-220ENST00000559880 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
SLTM-220ENST00000559880 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
SLTM-220ENST00000559880 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
SLTM-220ENST00000559880 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
SLTM-220ENST00000559880 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
SLTM-220ENST00000559880 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.44
SLTM-220ENST00000559880 PRXQ9BXM0 1461 aa17.76■□□□□ 0.43
SLTM-220ENST00000559880 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
SLTM-220ENST00000559880 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
SLTM-220ENST00000559880 EEA1Q15075 1411 aa17.72■□□□□ 0.43
SLTM-220ENST00000559880 IQGAP2Q13576 1575 aa17.69■□□□□ 0.42
SLTM-220ENST00000559880 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.41
SLTM-220ENST00000559880 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
SLTM-220ENST00000559880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.416e-7■■■■□ 21
SLTM-220ENST00000559880 DISP1Q96F81 1524 aa17.58■□□□□ 0.41
SLTM-220ENST00000559880 UGGT2Q9NYU1 1516 aa17.58■□□□□ 0.41
SLTM-220ENST00000559880 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
SLTM-220ENST00000559880 CACNB1Q02641 598 aaPredicted RBP17.58■□□□□ 0.4
SLTM-220ENST00000559880 KIF21BO75037 1637 aa17.58■□□□□ 0.4
SLTM-220ENST00000559880 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
SLTM-220ENST00000559880 CARMIL2Q6F5E8 1435 aa17.55■□□□□ 0.4
SLTM-220ENST00000559880 KIAA0556O60303 1618 aa17.53■□□□□ 0.4
SLTM-220ENST00000559880 TNIKQ9UKE5 1360 aa17.53■□□□□ 0.4
SLTM-220ENST00000559880 PTPRGP23470 1445 aa17.52■□□□□ 0.4
SLTM-220ENST00000559880 RANGAP1P46060 587 aaPredicted RBP17.5■□□□□ 0.39
SLTM-220ENST00000559880 ADCY10Q96PN6 1610 aa17.48■□□□□ 0.39
SLTM-220ENST00000559880 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
SLTM-220ENST00000559880 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
SLTM-220ENST00000559880 P3H3Q8IVL6 736 aa17.47■□□□□ 0.39
SLTM-220ENST00000559880 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
SLTM-220ENST00000559880 SAMD9Q5K651 1589 aa17.41■□□□□ 0.38
SLTM-220ENST00000559880 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
SLTM-220ENST00000559880 C1QBPQ07021 282 aaKnown RBP17.4■□□□□ 0.38
SLTM-220ENST00000559880 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
SLTM-220ENST00000559880 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
SLTM-220ENST00000559880 ABCC2Q92887 1545 aa17.37■□□□□ 0.37
SLTM-220ENST00000559880 FHOD3Q2V2M9 1422 aa17.36■□□□□ 0.37
SLTM-220ENST00000559880 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
SLTM-220ENST00000559880 ABCA8O94911 1581 aa17.33■□□□□ 0.37
SLTM-220ENST00000559880 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
SLTM-220ENST00000559880 EFCAB5A4FU69 1503 aa17.31■□□□□ 0.36
SLTM-220ENST00000559880 ARHGAP35Q9NRY4 1499 aa17.3■□□□□ 0.36
SLTM-220ENST00000559880 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
SLTM-220ENST00000559880 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
SLTM-220ENST00000559880 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
SLTM-220ENST00000559880 KIF13AQ9H1H9 1805 aa17.27■□□□□ 0.36
SLTM-220ENST00000559880 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
SLTM-220ENST00000559880 ASXL2Q76L83 1435 aa17.26■□□□□ 0.35
SLTM-220ENST00000559880 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
SLTM-220ENST00000559880 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
SLTM-220ENST00000559880 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
SLTM-220ENST00000559880 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
SLTM-220ENST00000559880 ATP10BO94823 1461 aa17.2■□□□□ 0.34
SLTM-220ENST00000559880 NUP153P49790 1475 aaKnown RBP17.2■□□□□ 0.34
SLTM-220ENST00000559880 CLIP1P30622 1438 aa17.19■□□□□ 0.34
SLTM-220ENST00000559880 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
SLTM-220ENST00000559880 FMN1Q68DA7 1419 aa17.15■□□□□ 0.34
SLTM-220ENST00000559880 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
SLTM-220ENST00000559880 EPRSP07814 1512 aaKnown RBP17.15■□□□□ 0.34
SLTM-220ENST00000559880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
SLTM-220ENST00000559880 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
SLTM-220ENST00000559880 KCNH8Q96L42 1107 aa17.14■□□□□ 0.33
SLTM-220ENST00000559880 ATP1B4Q9UN42 357 aaPredicted RBP17.14■□□□□ 0.33
SLTM-220ENST00000559880 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
SLTM-220ENST00000559880 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
SLTM-220ENST00000559880 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
SLTM-220ENST00000559880 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
SLTM-220ENST00000559880 GLI2P10070 1586 aa17.11■□□□□ 0.33
SLTM-220ENST00000559880 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
SLTM-220ENST00000559880 HECW1Q76N89 1606 aa17.08■□□□□ 0.32
SLTM-220ENST00000559880 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
SLTM-220ENST00000559880 LRRIQ1Q96JM4 1722 aa17.06■□□□□ 0.32
SLTM-220ENST00000559880 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
SLTM-220ENST00000559880 MAP3K4Q9Y6R4 1608 aa17.06■□□□□ 0.32
SLTM-220ENST00000559880 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
SLTM-220ENST00000559880 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
SLTM-220ENST00000559880 CD109Q6YHK3 1445 aa17.01■□□□□ 0.31
SLTM-220ENST00000559880 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
SLTM-220ENST00000559880 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
SLTM-220ENST00000559880 ABCA9Q8IUA7 1624 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms