RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CARMIL1Q5VZK9 1371 aa30.45■■■□□ 2.47
TPM1-218ENST00000559281 CUL7Q14999 1698 aa30.42■■■□□ 2.46
TPM1-218ENST00000559281 KIAA0586Q9BVV6 1533 aa30.41■■■□□ 2.46
TPM1-218ENST00000559281 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
TPM1-218ENST00000559281 NPM1P06748 294 aaKnown RBP eCLIP30.27■■■□□ 2.44
TPM1-218ENST00000559281 RAPGEF2Q9Y4G8 1499 aa30.17■■■□□ 2.42
TPM1-218ENST00000559281 CARMIL2Q6F5E8 1435 aa30.16■■■□□ 2.42
TPM1-218ENST00000559281 PTPRGP23470 1445 aa30.13■■■□□ 2.41
TPM1-218ENST00000559281 TNIKQ9UKE5 1360 aa30.08■■■□□ 2.41
TPM1-218ENST00000559281 IQGAP2Q13576 1575 aa30.07■■■□□ 2.4
TPM1-218ENST00000559281 TTBK1Q5TCY1 1321 aaPredicted RBP30.07■■■□□ 2.4
TPM1-218ENST00000559281 FAM69CQ0P6D2 419 aa30.01■■■□□ 2.39
TPM1-218ENST00000559281 ADCY10Q96PN6 1610 aa29.98■■■□□ 2.39
TPM1-218ENST00000559281 MAPKBP1O60336 1514 aa29.96■■■□□ 2.39
TPM1-218ENST00000559281 ABCC10Q5T3U5 1492 aa29.95■■■□□ 2.39
TPM1-218ENST00000559281 DISP1Q96F81 1524 aa29.91■■■□□ 2.38
TPM1-218ENST00000559281 UGGT2Q9NYU1 1516 aa29.91■■■□□ 2.38
TPM1-218ENST00000559281 PRXQ9BXM0 1461 aa29.9■■■□□ 2.38
TPM1-218ENST00000559281 UACAQ9BZF9 1416 aa29.88■■■□□ 2.37
TPM1-218ENST00000559281 CSRNP3Q8WYN3 585 aa29.87■■■□□ 2.37
TPM1-218ENST00000559281 ABCC2Q92887 1545 aa29.85■■■□□ 2.37
TPM1-218ENST00000559281 UHRF1BP1LA0JNW5 1464 aa29.84■■■□□ 2.37
TPM1-218ENST00000559281 KIF13AQ9H1H9 1805 aa29.81■■■□□ 2.36
TPM1-218ENST00000559281 GOLGA3Q08378 1498 aa29.79■■■□□ 2.36
TPM1-218ENST00000559281 DIP2BQ9P265 1576 aa29.77■■■□□ 2.36
TPM1-218ENST00000559281 KIAA0556O60303 1618 aa29.76■■■□□ 2.35
TPM1-218ENST00000559281 FAM9AQ8IZU1 332 aaPredicted RBP29.76■■■□□ 2.35
TPM1-218ENST00000559281 PLB1Q6P1J6 1458 aa29.75■■■□□ 2.35
TPM1-218ENST00000559281 EEA1Q15075 1411 aa29.75■■■□□ 2.35
TPM1-218ENST00000559281 ASXL2Q76L83 1435 aa29.73■■■□□ 2.35
TPM1-218ENST00000559281 CTTNBP2Q8WZ74 1663 aa29.7■■■□□ 2.35
TPM1-218ENST00000559281 KDM5BQ9UGL1 1544 aa29.68■■■□□ 2.34
TPM1-218ENST00000559281 AEBP2Q6ZN18 517 aaPredicted RBP29.65■■■□□ 2.34
TPM1-218ENST00000559281 P3H3Q8IVL6 736 aa29.58■■■□□ 2.33
TPM1-218ENST00000559281 GLI2P10070 1586 aa29.56■■■□□ 2.32
TPM1-218ENST00000559281 CHIC1Q5VXU3 224 aa29.53■■■□□ 2.32
TPM1-218ENST00000559281 EPRSP07814 1512 aaKnown RBP29.53■■■□□ 2.32
TPM1-218ENST00000559281 ZCCHC11Q5TAX3 1644 aaKnown RBP29.51■■■□□ 2.31
TPM1-218ENST00000559281 ABCA8O94911 1581 aa29.5■■■□□ 2.31
TPM1-218ENST00000559281 TSPOAP1O95153 1857 aa29.48■■■□□ 2.31
TPM1-218ENST00000559281 WDR7Q9Y4E6 1490 aa29.48■■■□□ 2.31
TPM1-218ENST00000559281 KDM6BO15054 1643 aa29.47■■■□□ 2.31
TPM1-218ENST00000559281 RANGAP1P46060 587 aaPredicted RBP29.45■■■□□ 2.31
TPM1-218ENST00000559281 KCNH8Q96L42 1107 aa29.45■■■□□ 2.31
TPM1-218ENST00000559281 TEX14Q8IWB6 1497 aa29.4■■■□□ 2.3
TPM1-218ENST00000559281 ARID3CA6NKF2 412 aa29.38■■■□□ 2.29
TPM1-218ENST00000559281 SAMD9Q5K651 1589 aa29.36■■■□□ 2.29
TPM1-218ENST00000559281 UBTFP17480 764 aaKnown RBP29.34■■■□□ 2.29
TPM1-218ENST00000559281 KIF21BO75037 1637 aa29.34■■■□□ 2.29
TPM1-218ENST00000559281 CD109Q6YHK3 1445 aa29.33■■■□□ 2.29
TPM1-218ENST00000559281 ATP10BO94823 1461 aa29.33■■■□□ 2.29
TPM1-218ENST00000559281 MAP3K4Q9Y6R4 1608 aa29.33■■■□□ 2.29
TPM1-218ENST00000559281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.32■■■□□ 2.28
TPM1-218ENST00000559281 HNRNPUL2Q1KMD3 747 aaKnown RBP29.32■■■□□ 2.28
TPM1-218ENST00000559281 PPRC1Q5VV67 1664 aaKnown RBP29.3■■■□□ 2.28
TPM1-218ENST00000559281 FHOD3Q2V2M9 1422 aa29.28■■■□□ 2.28
TPM1-218ENST00000559281 EHMT2Q96KQ7 1210 aa29.27■■■□□ 2.28
TPM1-218ENST00000559281 MAGI3Q5TCQ9 1506 aa29.25■■■□□ 2.27
TPM1-218ENST00000559281 COL17A1Q9UMD9 1497 aaPredicted RBP29.23■■■□□ 2.27
TPM1-218ENST00000559281 RAPGEF6Q8TEU7 1601 aa29.22■■■□□ 2.27
TPM1-218ENST00000559281 EFCAB5A4FU69 1503 aa29.21■■■□□ 2.27
TPM1-218ENST00000559281 PLEKHD1A6NEE1 506 aa29.18■■■□□ 2.26
TPM1-218ENST00000559281 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
TPM1-218ENST00000559281 NUP153P49790 1475 aaKnown RBP29.17■■■□□ 2.26
TPM1-218ENST00000559281 KDM4FA0A1W2PPD8 638 aa29.16■■■□□ 2.26
TPM1-218ENST00000559281 PHLDB1Q86UU1 1377 aa29.1■■■□□ 2.25
TPM1-218ENST00000559281 FMN1Q68DA7 1419 aa29.04■■■□□ 2.24
TPM1-218ENST00000559281 ATP1B4Q9UN42 357 aaPredicted RBP29.04■■■□□ 2.24
TPM1-218ENST00000559281 ABCA9Q8IUA7 1624 aa29.02■■■□□ 2.24
TPM1-218ENST00000559281 ARAP3Q8WWN8 1544 aa29■■■□□ 2.23
TPM1-218ENST00000559281 ARHGAP35Q9NRY4 1499 aa28.98■■■□□ 2.23
TPM1-218ENST00000559281 CDK11AQ9UQ88 783 aaPredicted RBP28.97■■■□□ 2.23
TPM1-218ENST00000559281 NEO1Q92859 1461 aa28.96■■■□□ 2.23
TPM1-218ENST00000559281 ADGRL1O94910 1474 aa28.92■■■□□ 2.22
TPM1-218ENST00000559281 RAPGEF3O95398 923 aa28.9■■■□□ 2.22
TPM1-218ENST00000559281 CDK13Q14004 1512 aaKnown RBP28.87■■■□□ 2.21
TPM1-218ENST00000559281 HECW1Q76N89 1606 aa28.83■■■□□ 2.21
TPM1-218ENST00000559281 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.83■■■□□ 2.21
TPM1-218ENST00000559281 AKNAQ7Z591 1439 aa28.81■■■□□ 2.2
TPM1-218ENST00000559281 FANCAO15360 1455 aa28.8■■■□□ 2.2
TPM1-218ENST00000559281 DENND4BO75064 1496 aaPredicted RBP28.78■■■□□ 2.2
TPM1-218ENST00000559281 PLCH2O75038 1416 aa28.75■■■□□ 2.19
TPM1-218ENST00000559281 EFCAB2Q5VUJ9 269 aa28.74■■■□□ 2.19
TPM1-218ENST00000559281 CLIP1P30622 1438 aa28.73■■■□□ 2.19
TPM1-218ENST00000559281 TROQ12816 1431 aaPredicted RBP28.72■■■□□ 2.19
TPM1-218ENST00000559281 CASKIN1Q8WXD9 1431 aa28.72■■■□□ 2.19
TPM1-218ENST00000559281 TTC37Q6PGP7 1564 aa28.71■■■□□ 2.19
TPM1-218ENST00000559281 CFAP74Q9C0B2 1584 aa28.71■■■□□ 2.19
TPM1-218ENST00000559281 ARID4BQ4LE39 1312 aaPredicted RBP28.69■■■□□ 2.18
TPM1-218ENST00000559281 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
TPM1-218ENST00000559281 SCAPERQ9BY12 1400 aa28.64■■■□□ 2.18
TPM1-218ENST00000559281 FRMPD1Q5SYB0 1578 aa28.63■■■□□ 2.17
TPM1-218ENST00000559281 KIF14Q15058 1648 aa28.61■■■□□ 2.17
TPM1-218ENST00000559281 FYCO1Q9BQS8 1478 aa28.59■■■□□ 2.17
TPM1-218ENST00000559281 MAGI2Q86UL8 1455 aa28.58■■■□□ 2.17
TPM1-218ENST00000559281 PCF11O94913 1555 aaKnown RBP28.57■■■□□ 2.16
TPM1-218ENST00000559281 RICTORQ6R327 1708 aa28.55■■■□□ 2.16
TPM1-218ENST00000559281 POGZQ7Z3K3 1410 aa28.54■■■□□ 2.16
TPM1-218ENST00000559281 ARHGAP5Q13017 1502 aa28.53■■■□□ 2.16
TPM1-218ENST00000559281 ZMYM4Q5VZL5 1548 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms