RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 ATAD2BQ9ULI0 1458 aa8.84□□□□□ -1
CTDSPL2-206ENST00000559175 NECTIN2Q92692 538 aa8.83□□□□□ -1
CTDSPL2-206ENST00000559175 SPRYD3Q8NCJ5 442 aa8.83□□□□□ -1
CTDSPL2-206ENST00000559175 POLR3GLQ9BT43 218 aa8.83□□□□□ -1
CTDSPL2-206ENST00000559175 ZBTB7CA1YPR0 619 aa8.82□□□□□ -1
CTDSPL2-206ENST00000559175 WDR62O43379 1518 aa8.82□□□□□ -1
CTDSPL2-206ENST00000559175 CNKSR2Q8WXI2 1034 aa8.8□□□□□ -1
CTDSPL2-206ENST00000559175 UBE2Q2Q8WVN8 375 aa8.8□□□□□ -1
CTDSPL2-206ENST00000559175 CUX2O14529 1486 aa8.8□□□□□ -1
CTDSPL2-206ENST00000559175 BRPF1P55201 1214 aaPredicted RBP8.79□□□□□ -1
CTDSPL2-206ENST00000559175 ZNF428Q96B54 188 aa8.78□□□□□ -1
CTDSPL2-206ENST00000559175 ARID3CA6NKF2 412 aa8.78□□□□□ -1
CTDSPL2-206ENST00000559175 HSP90B1P14625 803 aaKnown RBP8.78□□□□□ -1
CTDSPL2-206ENST00000559175 IFNLR1Q8IU57 520 aaPredicted RBP8.76□□□□□ -1.01
CTDSPL2-206ENST00000559175 C1orf115Q9H7X2 142 aa8.76□□□□□ -1.01
CTDSPL2-206ENST00000559175 KIF21AQ7Z4S6 1674 aa8.75□□□□□ -1.01
CTDSPL2-206ENST00000559175 PDE4CQ08493 712 aa8.75□□□□□ -1.01
CTDSPL2-206ENST00000559175 BIVM-ERCC5R4GMW8 1640 aa8.73□□□□□ -1.01
CTDSPL2-206ENST00000559175 BRD2P25440 801 aaKnown RBP8.72□□□□□ -1.01
CTDSPL2-206ENST00000559175 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
CTDSPL2-206ENST00000559175 NEUROD2Q15784 382 aa8.72□□□□□ -1.01
CTDSPL2-206ENST00000559175 MROH2BQ7Z745 1585 aa8.71□□□□□ -1.01
CTDSPL2-206ENST00000559175 HMGB1P09429 215 aaKnown RBP8.7□□□□□ -1.02
CTDSPL2-206ENST00000559175 RAD21O60216 631 aa8.69□□□□□ -1.02
CTDSPL2-206ENST00000559175 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-206ENST00000559175 WIZO95785 1651 aa8.68□□□□□ -1.02
CTDSPL2-206ENST00000559175 KCTD17Q8N5Z5 321 aa8.68□□□□□ -1.02
CTDSPL2-206ENST00000559175 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
CTDSPL2-206ENST00000559175 RBM25P49756 843 aaKnown RBP8.66□□□□□ -1.02
CTDSPL2-206ENST00000559175 CFTRP13569 1480 aa8.66□□□□□ -1.02
CTDSPL2-206ENST00000559175 ZMYND15Q9H091 742 aa8.65□□□□□ -1.02
CTDSPL2-206ENST00000559175 FOXD4L5Q5VV16 416 aaPredicted RBP8.65□□□□□ -1.02
CTDSPL2-206ENST00000559175 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
CTDSPL2-206ENST00000559175 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
CTDSPL2-206ENST00000559175 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL2-206ENST00000559175 TARBP1Q13395 1621 aaKnown RBP8.64□□□□□ -1.03
CTDSPL2-206ENST00000559175 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
CTDSPL2-206ENST00000559175 APBB1O00213 710 aa8.61□□□□□ -1.03
CTDSPL2-206ENST00000559175 RGL2O15211 777 aa8.61□□□□□ -1.03
CTDSPL2-206ENST00000559175 RSF1Q96T23 1441 aaPredicted RBP8.6□□□□□ -1.03
CTDSPL2-206ENST00000559175 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
CTDSPL2-206ENST00000559175 PUS7Q96PZ0 661 aaKnown RBP8.6□□□□□ -1.03
CTDSPL2-206ENST00000559175 CENPBP07199 599 aaPredicted RBP8.59□□□□□ -1.04
CTDSPL2-206ENST00000559175 USP35Q9P2H5 1018 aa8.59□□□□□ -1.04
CTDSPL2-206ENST00000559175 TAF7LQ5H9L4 462 aa8.58□□□□□ -1.04
CTDSPL2-206ENST00000559175 DNAJC5Q9H3Z4 198 aa8.58□□□□□ -1.04
CTDSPL2-206ENST00000559175 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
CTDSPL2-206ENST00000559175 IRX6P78412 446 aaPredicted RBP8.57□□□□□ -1.04
CTDSPL2-206ENST00000559175 ABCA5Q8WWZ7 1642 aa8.56□□□□□ -1.04
CTDSPL2-206ENST00000559175 NEFLP07196 543 aa8.56□□□□□ -1.04
CTDSPL2-206ENST00000559175 PIAS4Q8N2W9 510 aaPredicted RBP8.55□□□□□ -1.04
CTDSPL2-206ENST00000559175 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
CTDSPL2-206ENST00000559175 SHROOM2Q13796 1616 aa8.55□□□□□ -1.04
CTDSPL2-206ENST00000559175 BCL11BQ9C0K0 894 aaPredicted RBP8.54□□□□□ -1.04
CTDSPL2-206ENST00000559175 DNMBPQ6XZF7 1577 aa8.54□□□□□ -1.04
CTDSPL2-206ENST00000559175 ABCC8Q09428 1581 aa8.53□□□□□ -1.04
CTDSPL2-206ENST00000559175 LMOD2Q6P5Q4 547 aa8.53□□□□□ -1.04
CTDSPL2-206ENST00000559175 PBRM1Q86U86 1689 aa8.5□□□□□ -1.05
CTDSPL2-206ENST00000559175 MAPK8IP2Q13387 824 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-206ENST00000559175 SLC4A2P04920 1241 aa8.49□□□□□ -1.05
CTDSPL2-206ENST00000559175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.05
CTDSPL2-206ENST00000559175 SLC24A3Q9HC58 644 aa8.48□□□□□ -1.05
CTDSPL2-206ENST00000559175 FOXD1Q16676 465 aa8.48□□□□□ -1.05
CTDSPL2-206ENST00000559175 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
CTDSPL2-206ENST00000559175 DNAJC5BQ9UF47 199 aa8.47□□□□□ -1.05
CTDSPL2-206ENST00000559175 TOP2BQ02880 1626 aa8.47□□□□□ -1.05
CTDSPL2-206ENST00000559175 A0A0U1RQG5 324 aaPredicted RBP8.47□□□□□ -1.05
CTDSPL2-206ENST00000559175 CCDC136Q96JN2 1154 aa8.46□□□□□ -1.05
CTDSPL2-206ENST00000559175 MRC2Q9UBG0 1479 aa8.46□□□□□ -1.06
CTDSPL2-206ENST00000559175 ATXN8OSP0DMR3 200 aa8.45□□□□□ -1.06
CTDSPL2-206ENST00000559175 CWC22Q9HCG8 908 aaKnown RBP8.44□□□□□ -1.06
CTDSPL2-206ENST00000559175 PPM1GO15355 546 aaPredicted RBP8.44□□□□□ -1.06
CTDSPL2-206ENST00000559175 CCDC82Q8N4S0 544 aa8.44□□□□□ -1.06
CTDSPL2-206ENST00000559175 CLASP1Q7Z460 1538 aa8.44□□□□□ -1.06
CTDSPL2-206ENST00000559175 TMCO4Q5TGY1 634 aa8.43□□□□□ -1.06
CTDSPL2-206ENST00000559175 BRPF3Q9ULD4 1205 aa8.42□□□□□ -1.06
CTDSPL2-206ENST00000559175 SCAF1Q9H7N4 1312 aaKnown RBP8.42□□□□□ -1.06
CTDSPL2-206ENST00000559175 ZNF692Q9BU19 519 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL2-206ENST00000559175 FAM177A1Q8N128 213 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL2-206ENST00000559175 MFAP1P55081 439 aaKnown RBP8.41□□□□□ -1.06
CTDSPL2-206ENST00000559175 ATF5Q9Y2D1 282 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-206ENST00000559175 IL27Q8NEV9 243 aa8.41□□□□□ -1.06
CTDSPL2-206ENST00000559175 TRIM41Q8WV44 630 aa8.41□□□□□ -1.06
CTDSPL2-206ENST00000559175 ANO8Q9HCE9 1232 aaPredicted RBP8.41□□□□□ -1.06
CTDSPL2-206ENST00000559175 ZNF526Q8TF50 670 aaPredicted RBP8.4□□□□□ -1.06
CTDSPL2-206ENST00000559175 NESP48681 1621 aa8.4□□□□□ -1.06
CTDSPL2-206ENST00000559175 ZNF592Q92610 1267 aa8.4□□□□□ -1.07
CTDSPL2-206ENST00000559175 ZFP91Q96JP5 570 aaPredicted RBP8.4□□□□□ -1.07
CTDSPL2-206ENST00000559175 GZF1Q9H116 711 aaPredicted RBP8.39□□□□□ -1.07
CTDSPL2-206ENST00000559175 GPBP1L1Q9HC44 474 aaPredicted RBP8.39□□□□□ -1.07
CTDSPL2-206ENST00000559175 URB2Q14146 1524 aaKnown RBP8.38□□□□□ -1.07
CTDSPL2-206ENST00000559175 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
CTDSPL2-206ENST00000559175 MYCNP04198 464 aaPredicted RBP8.36□□□□□ -1.07
CTDSPL2-206ENST00000559175 ARID4BQ4LE39 1312 aaPredicted RBP8.36□□□□□ -1.07
CTDSPL2-206ENST00000559175 MKRN3Q13064 507 aaKnown RBP8.36□□□□□ -1.07
CTDSPL2-206ENST00000559175 EIF4G3O43432 1585 aaKnown RBP8.36□□□□□ -1.07
CTDSPL2-206ENST00000559175 CCDC88BA6NC98 1476 aa8.35□□□□□ -1.07
CTDSPL2-206ENST00000559175 CUL7Q14999 1698 aa8.35□□□□□ -1.07
CTDSPL2-206ENST00000559175 SPDYE4A6NLX3 237 aa8.34□□□□□ -1.07
CTDSPL2-206ENST00000559175 E9PSI1 815 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms