RNA–Protein interactions for RNA: ENST00000558953.1

MARK3-216, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-216ENST00000558953 POTEGQ6S5H5 508 aa12.29□□□□□ -0.44
MARK3-216ENST00000558953 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
MARK3-216ENST00000558953 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
MARK3-216ENST00000558953 CREBZFQ9NS37 354 aa12.23□□□□□ -0.45
MARK3-216ENST00000558953 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.45
MARK3-216ENST00000558953 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
MARK3-216ENST00000558953 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
MARK3-216ENST00000558953 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
MARK3-216ENST00000558953 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
MARK3-216ENST00000558953 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
MARK3-216ENST00000558953 METRNQ9UJH8 293 aa12.06□□□□□ -0.48
MARK3-216ENST00000558953 MAMSTRQ6ZN01 415 aa12.04□□□□□ -0.48
MARK3-216ENST00000558953 POTEJP0CG39 1038 aa12.03□□□□□ -0.48
MARK3-216ENST00000558953 C7P10643 843 aa12.03□□□□□ -0.48
MARK3-216ENST00000558953 ASTLQ6HA08 431 aaPredicted RBP12.03□□□□□ -0.48
MARK3-216ENST00000558953 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
MARK3-216ENST00000558953 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
MARK3-216ENST00000558953 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
MARK3-216ENST00000558953 LCE2DQ5TA82 110 aaPredicted RBP11.97□□□□□ -0.49
MARK3-216ENST00000558953 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
MARK3-216ENST00000558953 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
MARK3-216ENST00000558953 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
MARK3-216ENST00000558953 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
MARK3-216ENST00000558953 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
MARK3-216ENST00000558953 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
MARK3-216ENST00000558953 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
MARK3-216ENST00000558953 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
MARK3-216ENST00000558953 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
MARK3-216ENST00000558953 ATN1P54259 1190 aaPredicted RBP11.83□□□□□ -0.52
MARK3-216ENST00000558953 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
MARK3-216ENST00000558953 BAZ1AQ9NRL2 1556 aaPredicted RBP11.82□□□□□ -0.52
MARK3-216ENST00000558953 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
MARK3-216ENST00000558953 TSPYL2Q9H2G4 693 aaPredicted RBP11.76□□□□□ -0.53
MARK3-216ENST00000558953 PEG3Q9GZU2 1588 aa11.75□□□□□ -0.53
MARK3-216ENST00000558953 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
MARK3-216ENST00000558953 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
MARK3-216ENST00000558953 BAZ1BQ9UIG0 1483 aaKnown RBP11.75□□□□□ -0.53
MARK3-216ENST00000558953 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
MARK3-216ENST00000558953 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
MARK3-216ENST00000558953 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
MARK3-216ENST00000558953 ERCC6Q03468 1493 aa11.71□□□□□ -0.53
MARK3-216ENST00000558953 KIF12Q96FN5 646 aa11.71□□□□□ -0.53
MARK3-216ENST00000558953 CUX2O14529 1486 aa11.68□□□□□ -0.54
MARK3-216ENST00000558953 NESP48681 1621 aa11.65□□□□□ -0.54
MARK3-216ENST00000558953 TIE1P35590 1138 aa11.65□□□□□ -0.54
MARK3-216ENST00000558953 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
MARK3-216ENST00000558953 SEC24BO95487 1268 aa11.64□□□□□ -0.55
MARK3-216ENST00000558953 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
MARK3-216ENST00000558953 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
MARK3-216ENST00000558953 LAMC3Q9Y6N6 1575 aa11.62□□□□□ -0.55
MARK3-216ENST00000558953 MAP3K13O43283 966 aa11.6□□□□□ -0.55
MARK3-216ENST00000558953 DNAJC5Q9H3Z4 198 aa11.59□□□□□ -0.55
MARK3-216ENST00000558953 WIZO95785 1651 aa11.59□□□□□ -0.55
MARK3-216ENST00000558953 TTLL13PA6NNM8 815 aa11.57□□□□□ -0.56
MARK3-216ENST00000558953 ST18O60284 1047 aa11.55□□□□□ -0.56
MARK3-216ENST00000558953 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
MARK3-216ENST00000558953 PDS5BQ9NTI5 1447 aa11.54□□□□□ -0.56
MARK3-216ENST00000558953 IER5LQ5T953 404 aa11.54□□□□□ -0.56
MARK3-216ENST00000558953 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
MARK3-216ENST00000558953 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
MARK3-216ENST00000558953 CADPSQ9ULU8 1353 aa11.52□□□□□ -0.57
MARK3-216ENST00000558953 MMRN1Q13201 1228 aa11.5□□□□□ -0.57
MARK3-216ENST00000558953 RSF1Q96T23 1441 aaPredicted RBP11.5□□□□□ -0.57
MARK3-216ENST00000558953 TRIM35Q9UPQ4 493 aa11.49□□□□□ -0.57
MARK3-216ENST00000558953 SPNS2Q8IVW8 549 aa11.47□□□□□ -0.57
MARK3-216ENST00000558953 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
MARK3-216ENST00000558953 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
MARK3-216ENST00000558953 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
MARK3-216ENST00000558953 PROM2Q8N271 834 aa11.44□□□□□ -0.58
MARK3-216ENST00000558953 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
MARK3-216ENST00000558953 SGIP1Q9BQI5 828 aa11.43□□□□□ -0.58
MARK3-216ENST00000558953 CFTRP13569 1480 aa11.41□□□□□ -0.58
MARK3-216ENST00000558953 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
MARK3-216ENST00000558953 WDR62O43379 1518 aa11.4□□□□□ -0.58
MARK3-216ENST00000558953 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
MARK3-216ENST00000558953 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
MARK3-216ENST00000558953 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
MARK3-216ENST00000558953 PLCG2P16885 1265 aa11.38□□□□□ -0.59
MARK3-216ENST00000558953 MIER1Q8N108 512 aa11.38□□□□□ -0.59
MARK3-216ENST00000558953 SNPHO15079 494 aa11.34□□□□□ -0.59
MARK3-216ENST00000558953 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
MARK3-216ENST00000558953 IFNL1Q8IU54 200 aa11.32□□□□□ -0.6
MARK3-216ENST00000558953 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
MARK3-216ENST00000558953 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
MARK3-216ENST00000558953 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
MARK3-216ENST00000558953 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
MARK3-216ENST00000558953 URB2Q14146 1524 aaKnown RBP11.28□□□□□ -0.6
MARK3-216ENST00000558953 OCEL1Q9H607 264 aa11.25□□□□□ -0.61
MARK3-216ENST00000558953 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.25□□□□□ -0.61
MARK3-216ENST00000558953 NUBP1P53384 320 aa11.21□□□□□ -0.61
MARK3-216ENST00000558953 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
MARK3-216ENST00000558953 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
MARK3-216ENST00000558953 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
MARK3-216ENST00000558953 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
MARK3-216ENST00000558953 IFT140Q96RY7 1462 aa11.18□□□□□ -0.62
MARK3-216ENST00000558953 EMP3P54852 163 aa11.17□□□□□ -0.62
MARK3-216ENST00000558953 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
MARK3-216ENST00000558953 DNMBPQ6XZF7 1577 aa11.16□□□□□ -0.62
MARK3-216ENST00000558953 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
MARK3-216ENST00000558953 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms