RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 MAPKBP1O60336 1514 aa22.24■■□□□ 1.15
SMAD3-206ENST00000558739 ADCY10Q96PN6 1610 aa22.21■■□□□ 1.15
SMAD3-206ENST00000558739 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
SMAD3-206ENST00000558739 RUSC2Q8N2Y8 1516 aa22.13■■□□□ 1.13
SMAD3-206ENST00000558739 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
SMAD3-206ENST00000558739 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
SMAD3-206ENST00000558739 ADGRL1O94910 1474 aa22.09■■□□□ 1.13
SMAD3-206ENST00000558739 HECW2Q9P2P5 1572 aa22.09■■□□□ 1.13
SMAD3-206ENST00000558739 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
SMAD3-206ENST00000558739 NPM1P06748 294 aaKnown RBP eCLIP22.05■■□□□ 1.12
SMAD3-206ENST00000558739 BIVM-ERCC5R4GMW8 1640 aa22.03■■□□□ 1.12
SMAD3-206ENST00000558739 TOP2BQ02880 1626 aa22.02■■□□□ 1.11
SMAD3-206ENST00000558739 PPRC1Q5VV67 1664 aaKnown RBP22.01■■□□□ 1.11
SMAD3-206ENST00000558739 COL17A1Q9UMD9 1497 aaPredicted RBP21.9■■□□□ 1.1
SMAD3-206ENST00000558739 GLI2P10070 1586 aa21.82■■□□□ 1.08
SMAD3-206ENST00000558739 ASXL2Q76L83 1435 aa21.81■■□□□ 1.08
SMAD3-206ENST00000558739 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
SMAD3-206ENST00000558739 KIAA0586Q9BVV6 1533 aa21.8■■□□□ 1.08
SMAD3-206ENST00000558739 ABCC2Q92887 1545 aa21.8■■□□□ 1.08
SMAD3-206ENST00000558739 CUL7Q14999 1698 aa21.79■■□□□ 1.08
SMAD3-206ENST00000558739 PTPRGP23470 1445 aa21.75■■□□□ 1.07
SMAD3-206ENST00000558739 PLB1Q6P1J6 1458 aa21.74■■□□□ 1.07
SMAD3-206ENST00000558739 MAP3K4Q9Y6R4 1608 aa21.73■■□□□ 1.07
SMAD3-206ENST00000558739 FBXO41Q8TF61 875 aa21.72■■□□□ 1.07
SMAD3-206ENST00000558739 EPRSP07814 1512 aaKnown RBP21.69■■□□□ 1.06
SMAD3-206ENST00000558739 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
SMAD3-206ENST00000558739 IGF1RP08069 1367 aa21.62■■□□□ 1.05
SMAD3-206ENST00000558739 UHRF1BP1LA0JNW5 1464 aa21.62■■□□□ 1.05
SMAD3-206ENST00000558739 TEX14Q8IWB6 1497 aa21.62■■□□□ 1.05
SMAD3-206ENST00000558739 ZCCHC11Q5TAX3 1644 aaKnown RBP21.59■■□□□ 1.05
SMAD3-206ENST00000558739 KIF21BO75037 1637 aa21.58■■□□□ 1.05
SMAD3-206ENST00000558739 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
SMAD3-206ENST00000558739 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
SMAD3-206ENST00000558739 KDM5BQ9UGL1 1544 aa21.56■■□□□ 1.04
SMAD3-206ENST00000558739 CARMIL2Q6F5E8 1435 aa21.55■■□□□ 1.04
SMAD3-206ENST00000558739 DISP1Q96F81 1524 aa21.54■■□□□ 1.04
SMAD3-206ENST00000558739 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
SMAD3-206ENST00000558739 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
SMAD3-206ENST00000558739 LMTK3Q96Q04 1460 aa21.48■■□□□ 1.03
SMAD3-206ENST00000558739 WDR7Q9Y4E6 1490 aa21.46■■□□□ 1.03
SMAD3-206ENST00000558739 CARMIL1Q5VZK9 1371 aa21.43■■□□□ 1.02
SMAD3-206ENST00000558739 PTPRMP28827 1452 aa21.41■■□□□ 1.02
SMAD3-206ENST00000558739 MAGI3Q5TCQ9 1506 aa21.4■■□□□ 1.02
SMAD3-206ENST00000558739 CFAP43Q8NDM7 1665 aa21.4■■□□□ 1.02
SMAD3-206ENST00000558739 ADAMTSL3P82987 1691 aa21.39■■□□□ 1.01
SMAD3-206ENST00000558739 KIAA0556O60303 1618 aa21.39■■□□□ 1.01
SMAD3-206ENST00000558739 CD109Q6YHK3 1445 aa21.38■■□□□ 1.01
SMAD3-206ENST00000558739 PCF11O94913 1555 aaKnown RBP21.37■■□□□ 1.01
SMAD3-206ENST00000558739 UGGT2Q9NYU1 1516 aa21.35■■□□□ 1.01
SMAD3-206ENST00000558739 ILDR2Q71H61 639 aa21.33■■□□□ 1.01
SMAD3-206ENST00000558739 MADDQ8WXG6 1647 aa21.31■■□□□ 1
SMAD3-206ENST00000558739 KCNH8Q96L42 1107 aa21.29■■□□□ 1
SMAD3-206ENST00000558739 ARAP3Q8WWN8 1544 aa21.26■□□□□ 0.99
SMAD3-206ENST00000558739 BCORL1Q5H9F3 1711 aa21.26■□□□□ 0.99
SMAD3-206ENST00000558739 ABCA8O94911 1581 aa21.23■□□□□ 0.99
SMAD3-206ENST00000558739 HSPA2P54652 639 aa21.21■□□□□ 0.99
SMAD3-206ENST00000558739 RIMS1Q86UR5 1692 aaKnown RBP21.2■□□□□ 0.98
SMAD3-206ENST00000558739 DISP3Q9P2K9 1392 aa21.2■□□□□ 0.98
SMAD3-206ENST00000558739 SOCS7O14512 581 aa21.19■□□□□ 0.98
SMAD3-206ENST00000558739 FRMPD1Q5SYB0 1578 aa21.19■□□□□ 0.98
SMAD3-206ENST00000558739 RAPGEF3O95398 923 aa21.16■□□□□ 0.98
SMAD3-206ENST00000558739 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.98
SMAD3-206ENST00000558739 ARID3CA6NKF2 412 aa21.13■□□□□ 0.97
SMAD3-206ENST00000558739 CERKQ8TCT0 537 aa21.13■□□□□ 0.97
SMAD3-206ENST00000558739 CTTNBP2Q8WZ74 1663 aa21.11■□□□□ 0.97
SMAD3-206ENST00000558739 ABCA9Q8IUA7 1624 aa21.11■□□□□ 0.97
SMAD3-206ENST00000558739 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
SMAD3-206ENST00000558739 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
SMAD3-206ENST00000558739 SIGLEC1Q9BZZ2 1709 aa21.07■□□□□ 0.96
SMAD3-206ENST00000558739 ARHGEF40Q8TER5 1519 aa21.07■□□□□ 0.96
SMAD3-206ENST00000558739 SPATA31D1Q6ZQQ2 1576 aa21.06■□□□□ 0.96
SMAD3-206ENST00000558739 ATP10BO94823 1461 aa21.01■□□□□ 0.95
SMAD3-206ENST00000558739 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
SMAD3-206ENST00000558739 NEO1Q92859 1461 aa21.01■□□□□ 0.95
SMAD3-206ENST00000558739 RICTORQ6R327 1708 aa20.98■□□□□ 0.95
SMAD3-206ENST00000558739 PHLDB1Q86UU1 1377 aa20.97■□□□□ 0.95
SMAD3-206ENST00000558739 FER1L4A9Z1Z3 1794 aa20.92■□□□□ 0.94
SMAD3-206ENST00000558739 TTC37Q6PGP7 1564 aa20.9■□□□□ 0.94
SMAD3-206ENST00000558739 YEATS2Q9ULM3 1422 aa20.9■□□□□ 0.94
SMAD3-206ENST00000558739 STRCQ7RTU9 1775 aa20.89■□□□□ 0.93
SMAD3-206ENST00000558739 FANCAO15360 1455 aa20.88■□□□□ 0.93
SMAD3-206ENST00000558739 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
SMAD3-206ENST00000558739 DENND4BO75064 1496 aaPredicted RBP20.87■□□□□ 0.93
SMAD3-206ENST00000558739 MLECQ14165 292 aa20.86■□□□□ 0.93
SMAD3-206ENST00000558739 PREX1Q8TCU6 1659 aa20.86■□□□□ 0.93
SMAD3-206ENST00000558739 ZMYM4Q5VZL5 1548 aa20.85■□□□□ 0.93
SMAD3-206ENST00000558739 ZFYVE16Q7Z3T8 1539 aa20.84■□□□□ 0.93
SMAD3-206ENST00000558739 FHOD3Q2V2M9 1422 aa20.84■□□□□ 0.93
SMAD3-206ENST00000558739 AKNAQ7Z591 1439 aa20.84■□□□□ 0.93
SMAD3-206ENST00000558739 RAPGEF6Q8TEU7 1601 aa20.83■□□□□ 0.93
SMAD3-206ENST00000558739 POGZQ7Z3K3 1410 aa20.83■□□□□ 0.93
SMAD3-206ENST00000558739 NUP153P49790 1475 aaKnown RBP20.79■□□□□ 0.92
SMAD3-206ENST00000558739 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
SMAD3-206ENST00000558739 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
SMAD3-206ENST00000558739 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
SMAD3-206ENST00000558739 PRXQ9BXM0 1461 aa20.76■□□□□ 0.91
SMAD3-206ENST00000558739 CEBPAP49715 358 aaPredicted RBP20.76■□□□□ 0.91
SMAD3-206ENST00000558739 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
SMAD3-206ENST00000558739 CFAP74Q9C0B2 1584 aa20.76■□□□□ 0.91
SMAD3-206ENST00000558739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms