RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 ABCC10Q5T3U5 1492 aa20.24■□□□□ 0.83
CASC4-205ENST00000558735 MAPKBP1O60336 1514 aa20.22■□□□□ 0.83
CASC4-205ENST00000558735 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
CASC4-205ENST00000558735 FAM69CQ0P6D2 419 aa20.19■□□□□ 0.82
CASC4-205ENST00000558735 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
CASC4-205ENST00000558735 DIP2BQ9P265 1576 aa20.15■□□□□ 0.82
CASC4-205ENST00000558735 ADCY10Q96PN6 1610 aa20.13■□□□□ 0.81
CASC4-205ENST00000558735 KIAA0586Q9BVV6 1533 aa20.11■□□□□ 0.81
CASC4-205ENST00000558735 IGF1RP08069 1367 aa20.08■□□□□ 0.81
CASC4-205ENST00000558735 KDM4FA0A1W2PPD8 638 aa20.06■□□□□ 0.8
CASC4-205ENST00000558735 KDM6BO15054 1643 aa20.03■□□□□ 0.8
CASC4-205ENST00000558735 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
CASC4-205ENST00000558735 CUL7Q14999 1698 aa19.97■□□□□ 0.79
CASC4-205ENST00000558735 PTPRGP23470 1445 aa19.96■□□□□ 0.79
CASC4-205ENST00000558735 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
CASC4-205ENST00000558735 ABCC2Q92887 1545 aa19.92■□□□□ 0.78
CASC4-205ENST00000558735 GLI2P10070 1586 aa19.91■□□□□ 0.78
CASC4-205ENST00000558735 TNIKQ9UKE5 1360 aa19.9■□□□□ 0.78
CASC4-205ENST00000558735 TSPOAP1O95153 1857 aa19.89■□□□□ 0.77
CASC4-205ENST00000558735 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
CASC4-205ENST00000558735 PLB1Q6P1J6 1458 aa19.89■□□□□ 0.77
CASC4-205ENST00000558735 UHRF1BP1LA0JNW5 1464 aa19.88■□□□□ 0.77
CASC4-205ENST00000558735 ASXL2Q76L83 1435 aa19.87■□□□□ 0.77
CASC4-205ENST00000558735 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
CASC4-205ENST00000558735 IQGAP2Q13576 1575 aa19.8■□□□□ 0.76
CASC4-205ENST00000558735 UACAQ9BZF9 1416 aa19.8■□□□□ 0.76
CASC4-205ENST00000558735 ILDR1Q86SU0 546 aaPredicted RBP19.79■□□□□ 0.76
CASC4-205ENST00000558735 ADGRL1O94910 1474 aa19.78■□□□□ 0.76
CASC4-205ENST00000558735 DISP1Q96F81 1524 aa19.77■□□□□ 0.76
CASC4-205ENST00000558735 KDM5BQ9UGL1 1544 aa19.77■□□□□ 0.76
CASC4-205ENST00000558735 COL17A1Q9UMD9 1497 aaPredicted RBP19.77■□□□□ 0.76
CASC4-205ENST00000558735 EPRSP07814 1512 aaKnown RBP19.76■□□□□ 0.75
CASC4-205ENST00000558735 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
CASC4-205ENST00000558735 MAP3K4Q9Y6R4 1608 aa19.73■□□□□ 0.75
CASC4-205ENST00000558735 TEX14Q8IWB6 1497 aa19.72■□□□□ 0.75
CASC4-205ENST00000558735 UGGT2Q9NYU1 1516 aa19.71■□□□□ 0.75
CASC4-205ENST00000558735 RAPGEF2Q9Y4G8 1499 aa19.7■□□□□ 0.74
CASC4-205ENST00000558735 ZCCHC11Q5TAX3 1644 aaKnown RBP19.65■□□□□ 0.74
CASC4-205ENST00000558735 KIAA0556O60303 1618 aa19.62■□□□□ 0.73
CASC4-205ENST00000558735 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
CASC4-205ENST00000558735 HECW2Q9P2P5 1572 aa19.61■□□□□ 0.73
CASC4-205ENST00000558735 MAGI3Q5TCQ9 1506 aa19.58■□□□□ 0.73
CASC4-205ENST00000558735 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
CASC4-205ENST00000558735 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
CASC4-205ENST00000558735 CFAP43Q8NDM7 1665 aa19.51■□□□□ 0.71
CASC4-205ENST00000558735 ABCA8O94911 1581 aa19.5■□□□□ 0.71
CASC4-205ENST00000558735 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
CASC4-205ENST00000558735 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
CASC4-205ENST00000558735 ARAP3Q8WWN8 1544 aa19.46■□□□□ 0.71
CASC4-205ENST00000558735 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
CASC4-205ENST00000558735 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
CASC4-205ENST00000558735 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
CASC4-205ENST00000558735 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
CASC4-205ENST00000558735 KIF21BO75037 1637 aa19.36■□□□□ 0.69
CASC4-205ENST00000558735 FBXO41Q8TF61 875 aa19.35■□□□□ 0.69
CASC4-205ENST00000558735 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
CASC4-205ENST00000558735 ATP10BO94823 1461 aa19.34■□□□□ 0.69
CASC4-205ENST00000558735 ABCA9Q8IUA7 1624 aa19.32■□□□□ 0.68
CASC4-205ENST00000558735 ADAMTSL3P82987 1691 aa19.31■□□□□ 0.68
CASC4-205ENST00000558735 PTPRMP28827 1452 aa19.31■□□□□ 0.68
CASC4-205ENST00000558735 EEA1Q15075 1411 aa19.31■□□□□ 0.68
CASC4-205ENST00000558735 NEO1Q92859 1461 aa19.28■□□□□ 0.68
CASC4-205ENST00000558735 ARID3CA6NKF2 412 aa19.28■□□□□ 0.68
CASC4-205ENST00000558735 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
CASC4-205ENST00000558735 RAPGEF3O95398 923 aa19.24■□□□□ 0.67
CASC4-205ENST00000558735 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
CASC4-205ENST00000558735 BCORL1Q5H9F3 1711 aa19.2■□□□□ 0.66
CASC4-205ENST00000558735 SAMD9Q5K651 1589 aa19.2■□□□□ 0.66
CASC4-205ENST00000558735 FRMPD1Q5SYB0 1578 aa19.2■□□□□ 0.66
CASC4-205ENST00000558735 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
CASC4-205ENST00000558735 LMTK3Q96Q04 1460 aa19.18■□□□□ 0.66
CASC4-205ENST00000558735 RAPGEF6Q8TEU7 1601 aa19.17■□□□□ 0.66
CASC4-205ENST00000558735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
CASC4-205ENST00000558735 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
CASC4-205ENST00000558735 MADDQ8WXG6 1647 aa19.14■□□□□ 0.66
CASC4-205ENST00000558735 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
CASC4-205ENST00000558735 FHOD3Q2V2M9 1422 aa19.14■□□□□ 0.65
CASC4-205ENST00000558735 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.65
CASC4-205ENST00000558735 ARHGEF40Q8TER5 1519 aa19.13■□□□□ 0.65
CASC4-205ENST00000558735 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
CASC4-205ENST00000558735 DENND4BO75064 1496 aaPredicted RBP19.11■□□□□ 0.65
CASC4-205ENST00000558735 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
CASC4-205ENST00000558735 AKNAQ7Z591 1439 aa19.08■□□□□ 0.65
CASC4-205ENST00000558735 RICTORQ6R327 1708 aa19.08■□□□□ 0.64
CASC4-205ENST00000558735 ZMYM4Q5VZL5 1548 aa19.07■□□□□ 0.64
CASC4-205ENST00000558735 PLEKHD1A6NEE1 506 aa19.07■□□□□ 0.64
CASC4-205ENST00000558735 FANCAO15360 1455 aa19.05■□□□□ 0.64
CASC4-205ENST00000558735 POGZQ7Z3K3 1410 aa19.05■□□□□ 0.64
CASC4-205ENST00000558735 MAGI2Q86UL8 1455 aa19.04■□□□□ 0.64
CASC4-205ENST00000558735 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
CASC4-205ENST00000558735 RIMS1Q86UR5 1692 aaKnown RBP19.04■□□□□ 0.64
CASC4-205ENST00000558735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.02■□□□□ 0.64
CASC4-205ENST00000558735 EFCAB5A4FU69 1503 aa19■□□□□ 0.63
CASC4-205ENST00000558735 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
CASC4-205ENST00000558735 HSPA2P54652 639 aa18.99■□□□□ 0.63
CASC4-205ENST00000558735 YEATS2Q9ULM3 1422 aa18.99■□□□□ 0.63
CASC4-205ENST00000558735 CERKQ8TCT0 537 aa18.96■□□□□ 0.63
CASC4-205ENST00000558735 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
CASC4-205ENST00000558735 TTC37Q6PGP7 1564 aa18.96■□□□□ 0.63
CASC4-205ENST00000558735 SIGLEC1Q9BZZ2 1709 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms