RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 FAM69CQ0P6D2 419 aa23.35■■□□□ 1.33
TMED3-205ENST00000558562 ABCC10Q5T3U5 1492 aa23.3■■□□□ 1.32
TMED3-205ENST00000558562 NPM1P06748 294 aaKnown RBP eCLIP23.29■■□□□ 1.32
TMED3-205ENST00000558562 RUSC2Q8N2Y8 1516 aa23.27■■□□□ 1.32
TMED3-205ENST00000558562 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
TMED3-205ENST00000558562 ADCY10Q96PN6 1610 aa23.22■■□□□ 1.31
TMED3-205ENST00000558562 MAPKBP1O60336 1514 aa23.22■■□□□ 1.31
TMED3-205ENST00000558562 KDM4FA0A1W2PPD8 638 aa23.17■■□□□ 1.3
TMED3-205ENST00000558562 TSPOAP1O95153 1857 aa23.15■■□□□ 1.3
TMED3-205ENST00000558562 KDM6BO15054 1643 aa23.15■■□□□ 1.3
TMED3-205ENST00000558562 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
TMED3-205ENST00000558562 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.28
TMED3-205ENST00000558562 IGF1RP08069 1367 aa23.05■■□□□ 1.28
TMED3-205ENST00000558562 PTPRGP23470 1445 aa23■■□□□ 1.27
TMED3-205ENST00000558562 KIF27Q86VH2 1401 aa22.99■■□□□ 1.27
TMED3-205ENST00000558562 CUL7Q14999 1698 aa22.97■■□□□ 1.27
TMED3-205ENST00000558562 ILDR1Q86SU0 546 aaPredicted RBP22.94■■□□□ 1.26
TMED3-205ENST00000558562 ABCC2Q92887 1545 aa22.92■■□□□ 1.26
TMED3-205ENST00000558562 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
TMED3-205ENST00000558562 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
TMED3-205ENST00000558562 PPRC1Q5VV67 1664 aaKnown RBP22.89■■□□□ 1.25
TMED3-205ENST00000558562 CARMIL2Q6F5E8 1435 aa22.89■■□□□ 1.25
TMED3-205ENST00000558562 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
TMED3-205ENST00000558562 PLB1Q6P1J6 1458 aa22.86■■□□□ 1.25
TMED3-205ENST00000558562 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
TMED3-205ENST00000558562 GLI2P10070 1586 aa22.84■■□□□ 1.25
TMED3-205ENST00000558562 IQGAP2Q13576 1575 aa22.82■■□□□ 1.24
TMED3-205ENST00000558562 COL17A1Q9UMD9 1497 aaPredicted RBP22.81■■□□□ 1.24
TMED3-205ENST00000558562 UACAQ9BZF9 1416 aa22.8■■□□□ 1.24
TMED3-205ENST00000558562 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
TMED3-205ENST00000558562 DISP1Q96F81 1524 aa22.77■■□□□ 1.24
TMED3-205ENST00000558562 EPRSP07814 1512 aaKnown RBP22.76■■□□□ 1.23
TMED3-205ENST00000558562 MAP3K4Q9Y6R4 1608 aa22.73■■□□□ 1.23
TMED3-205ENST00000558562 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
TMED3-205ENST00000558562 ZCCHC11Q5TAX3 1644 aaKnown RBP22.7■■□□□ 1.22
TMED3-205ENST00000558562 HECW2Q9P2P5 1572 aa22.68■■□□□ 1.22
TMED3-205ENST00000558562 TEX14Q8IWB6 1497 aa22.68■■□□□ 1.22
TMED3-205ENST00000558562 UGGT2Q9NYU1 1516 aa22.64■■□□□ 1.21
TMED3-205ENST00000558562 KIAA0556O60303 1618 aa22.62■■□□□ 1.21
TMED3-205ENST00000558562 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
TMED3-205ENST00000558562 RAPGEF2Q9Y4G8 1499 aa22.61■■□□□ 1.21
TMED3-205ENST00000558562 WDR7Q9Y4E6 1490 aa22.6■■□□□ 1.21
TMED3-205ENST00000558562 KCNH8Q96L42 1107 aa22.55■■□□□ 1.2
TMED3-205ENST00000558562 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
TMED3-205ENST00000558562 MAGI3Q5TCQ9 1506 aa22.48■■□□□ 1.19
TMED3-205ENST00000558562 CFAP43Q8NDM7 1665 aa22.47■■□□□ 1.19
TMED3-205ENST00000558562 KIF21BO75037 1637 aa22.44■■□□□ 1.18
TMED3-205ENST00000558562 ABCA8O94911 1581 aa22.44■■□□□ 1.18
TMED3-205ENST00000558562 CTTNBP2Q8WZ74 1663 aa22.44■■□□□ 1.18
TMED3-205ENST00000558562 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
TMED3-205ENST00000558562 GOLGA3Q08378 1498 aa22.41■■□□□ 1.18
TMED3-205ENST00000558562 ARAP3Q8WWN8 1544 aa22.32■■□□□ 1.16
TMED3-205ENST00000558562 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
TMED3-205ENST00000558562 FBXO41Q8TF61 875 aa22.31■■□□□ 1.16
TMED3-205ENST00000558562 ATP10BO94823 1461 aa22.28■■□□□ 1.16
TMED3-205ENST00000558562 PTPRMP28827 1452 aa22.28■■□□□ 1.16
TMED3-205ENST00000558562 RAPGEF3O95398 923 aa22.27■■□□□ 1.16
TMED3-205ENST00000558562 PRXQ9BXM0 1461 aa22.26■■□□□ 1.15
TMED3-205ENST00000558562 ADAMTSL3P82987 1691 aa22.24■■□□□ 1.15
TMED3-205ENST00000558562 ABCA9Q8IUA7 1624 aa22.23■■□□□ 1.15
TMED3-205ENST00000558562 FAM9AQ8IZU1 332 aaPredicted RBP22.22■■□□□ 1.15
TMED3-205ENST00000558562 ARID4BQ4LE39 1312 aaPredicted RBP22.19■■□□□ 1.14
TMED3-205ENST00000558562 PHLDB1Q86UU1 1377 aa22.19■■□□□ 1.14
TMED3-205ENST00000558562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
TMED3-205ENST00000558562 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
TMED3-205ENST00000558562 MADDQ8WXG6 1647 aa22.16■■□□□ 1.14
TMED3-205ENST00000558562 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
TMED3-205ENST00000558562 FRMPD1Q5SYB0 1578 aa22.15■■□□□ 1.14
TMED3-205ENST00000558562 NEO1Q92859 1461 aa22.15■■□□□ 1.14
TMED3-205ENST00000558562 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
TMED3-205ENST00000558562 RAPGEF6Q8TEU7 1601 aa22.12■■□□□ 1.13
TMED3-205ENST00000558562 LMTK3Q96Q04 1460 aa22.11■■□□□ 1.13
TMED3-205ENST00000558562 SAMD9Q5K651 1589 aa22.09■■□□□ 1.13
TMED3-205ENST00000558562 RANGAP1P46060 587 aaPredicted RBP22.08■■□□□ 1.13
TMED3-205ENST00000558562 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
TMED3-205ENST00000558562 RIMS1Q86UR5 1692 aaKnown RBP22.07■■□□□ 1.12
TMED3-205ENST00000558562 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
TMED3-205ENST00000558562 HSPA2P54652 639 aa22.05■■□□□ 1.12
TMED3-205ENST00000558562 ARHGEF40Q8TER5 1519 aa22.04■■□□□ 1.12
TMED3-205ENST00000558562 DENND4BO75064 1496 aaPredicted RBP22.02■■□□□ 1.12
TMED3-205ENST00000558562 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
TMED3-205ENST00000558562 RICTORQ6R327 1708 aa22■■□□□ 1.11
TMED3-205ENST00000558562 FHOD3Q2V2M9 1422 aa21.99■■□□□ 1.11
TMED3-205ENST00000558562 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
TMED3-205ENST00000558562 PLEKHD1A6NEE1 506 aa21.99■■□□□ 1.11
TMED3-205ENST00000558562 FANCAO15360 1455 aa21.97■■□□□ 1.11
TMED3-205ENST00000558562 SIGLEC1Q9BZZ2 1709 aa21.95■■□□□ 1.1
TMED3-205ENST00000558562 MLECQ14165 292 aa21.95■■□□□ 1.1
TMED3-205ENST00000558562 YEATS2Q9ULM3 1422 aa21.94■■□□□ 1.1
TMED3-205ENST00000558562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.94■■□□□ 1.1
TMED3-205ENST00000558562 POGZQ7Z3K3 1410 aa21.93■■□□□ 1.1
TMED3-205ENST00000558562 TTC37Q6PGP7 1564 aa21.91■■□□□ 1.1
TMED3-205ENST00000558562 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
TMED3-205ENST00000558562 ZFYVE16Q7Z3T8 1539 aa21.91■■□□□ 1.1
TMED3-205ENST00000558562 ZMYM4Q5VZL5 1548 aa21.9■■□□□ 1.1
TMED3-205ENST00000558562 CERKQ8TCT0 537 aa21.89■■□□□ 1.09
TMED3-205ENST00000558562 EFCAB5A4FU69 1503 aa21.88■■□□□ 1.09
TMED3-205ENST00000558562 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
TMED3-205ENST00000558562 FER1L4A9Z1Z3 1794 aa21.85■■□□□ 1.09
TMED3-205ENST00000558562 MAGI2Q86UL8 1455 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms