RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
ABCD4-227ENST00000557554 KDM6BO15054 1643 aa18.71■□□□□ 0.59
ABCD4-227ENST00000557554 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
ABCD4-227ENST00000557554 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
ABCD4-227ENST00000557554 ADCY10Q96PN6 1610 aa18.62■□□□□ 0.57
ABCD4-227ENST00000557554 TSPOAP1O95153 1857 aa18.61■□□□□ 0.57
ABCD4-227ENST00000557554 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
ABCD4-227ENST00000557554 ADGRL1O94910 1474 aa18.56■□□□□ 0.56
ABCD4-227ENST00000557554 HECW2Q9P2P5 1572 aa18.53■□□□□ 0.56
ABCD4-227ENST00000557554 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
ABCD4-227ENST00000557554 TOP2BQ02880 1626 aa18.48■□□□□ 0.55
ABCD4-227ENST00000557554 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
ABCD4-227ENST00000557554 COL17A1Q9UMD9 1497 aaPredicted RBP18.46■□□□□ 0.55
ABCD4-227ENST00000557554 PPRC1Q5VV67 1664 aaKnown RBP18.46■□□□□ 0.55
ABCD4-227ENST00000557554 FBXO41Q8TF61 875 aa18.44■□□□□ 0.54
ABCD4-227ENST00000557554 GLI2P10070 1586 aa18.41■□□□□ 0.54
ABCD4-227ENST00000557554 KIAA0586Q9BVV6 1533 aa18.4■□□□□ 0.54
ABCD4-227ENST00000557554 PTPRGP23470 1445 aa18.37■□□□□ 0.53
ABCD4-227ENST00000557554 ASXL2Q76L83 1435 aa18.37■□□□□ 0.53
ABCD4-227ENST00000557554 ABCC2Q92887 1545 aa18.35■□□□□ 0.53
ABCD4-227ENST00000557554 PLB1Q6P1J6 1458 aa18.34■□□□□ 0.53
ABCD4-227ENST00000557554 IGF1RP08069 1367 aa18.28■□□□□ 0.52
ABCD4-227ENST00000557554 MAP3K4Q9Y6R4 1608 aa18.27■□□□□ 0.52
ABCD4-227ENST00000557554 TNIKQ9UKE5 1360 aa18.26■□□□□ 0.51
ABCD4-227ENST00000557554 UHRF1BP1LA0JNW5 1464 aa18.26■□□□□ 0.51
ABCD4-227ENST00000557554 EPRSP07814 1512 aaKnown RBP18.25■□□□□ 0.51
ABCD4-227ENST00000557554 TTBK1Q5TCY1 1321 aaPredicted RBP18.23■□□□□ 0.51
ABCD4-227ENST00000557554 CUL7Q14999 1698 aa18.23■□□□□ 0.51
ABCD4-227ENST00000557554 TEX14Q8IWB6 1497 aa18.22■□□□□ 0.51
ABCD4-227ENST00000557554 UACAQ9BZF9 1416 aa18.2■□□□□ 0.5
ABCD4-227ENST00000557554 KDM5BQ9UGL1 1544 aa18.18■□□□□ 0.5
ABCD4-227ENST00000557554 CARMIL2Q6F5E8 1435 aa18.18■□□□□ 0.5
ABCD4-227ENST00000557554 DISP1Q96F81 1524 aa18.1■□□□□ 0.49
ABCD4-227ENST00000557554 LMTK3Q96Q04 1460 aa18.09■□□□□ 0.49
ABCD4-227ENST00000557554 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
ABCD4-227ENST00000557554 KIF27Q86VH2 1401 aa18.08■□□□□ 0.49
ABCD4-227ENST00000557554 CARMIL1Q5VZK9 1371 aa18.07■□□□□ 0.48
ABCD4-227ENST00000557554 SUPT5HO00267 1087 aaKnown RBP18.07■□□□□ 0.48
ABCD4-227ENST00000557554 MAGI3Q5TCQ9 1506 aa18.07■□□□□ 0.48
ABCD4-227ENST00000557554 IQGAP2Q13576 1575 aa18.05■□□□□ 0.48
ABCD4-227ENST00000557554 PTPRMP28827 1452 aa18.04■□□□□ 0.48
ABCD4-227ENST00000557554 WDR7Q9Y4E6 1490 aa18.04■□□□□ 0.48
ABCD4-227ENST00000557554 KIF21BO75037 1637 aa18.04■□□□□ 0.48
ABCD4-227ENST00000557554 CD109Q6YHK3 1445 aa18.04■□□□□ 0.48
ABCD4-227ENST00000557554 ILDR2Q71H61 639 aa18.02■□□□□ 0.48
ABCD4-227ENST00000557554 ADAMTSL3P82987 1691 aa18.01■□□□□ 0.47
ABCD4-227ENST00000557554 SOCS7O14512 581 aa17.99■□□□□ 0.47
ABCD4-227ENST00000557554 CFAP43Q8NDM7 1665 aa17.98■□□□□ 0.47
ABCD4-227ENST00000557554 ARAP3Q8WWN8 1544 aa17.97■□□□□ 0.47
ABCD4-227ENST00000557554 UGGT2Q9NYU1 1516 aa17.97■□□□□ 0.47
ABCD4-227ENST00000557554 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
ABCD4-227ENST00000557554 PCF11O94913 1555 aaKnown RBP17.95■□□□□ 0.46
ABCD4-227ENST00000557554 CERKQ8TCT0 537 aa17.91■□□□□ 0.46
ABCD4-227ENST00000557554 KIAA0556O60303 1618 aa17.9■□□□□ 0.46
ABCD4-227ENST00000557554 DISP3Q9P2K9 1392 aa17.86■□□□□ 0.45
ABCD4-227ENST00000557554 BCORL1Q5H9F3 1711 aa17.86■□□□□ 0.45
ABCD4-227ENST00000557554 RAPGEF3O95398 923 aa17.85■□□□□ 0.45
ABCD4-227ENST00000557554 HSPA2P54652 639 aa17.85■□□□□ 0.45
ABCD4-227ENST00000557554 PHLDB1Q86UU1 1377 aa17.84■□□□□ 0.45
ABCD4-227ENST00000557554 MADDQ8WXG6 1647 aa17.83■□□□□ 0.45
ABCD4-227ENST00000557554 ABCA8O94911 1581 aa17.83■□□□□ 0.45
ABCD4-227ENST00000557554 RAPGEF2Q9Y4G8 1499 aa17.8■□□□□ 0.44
ABCD4-227ENST00000557554 ARID4BQ4LE39 1312 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-227ENST00000557554 FRMPD1Q5SYB0 1578 aa17.74■□□□□ 0.43
ABCD4-227ENST00000557554 RIMS1Q86UR5 1692 aaKnown RBP17.74■□□□□ 0.43
ABCD4-227ENST00000557554 ABCA9Q8IUA7 1624 aa17.73■□□□□ 0.43
ABCD4-227ENST00000557554 ATP10BO94823 1461 aa17.72■□□□□ 0.43
ABCD4-227ENST00000557554 NEO1Q92859 1461 aa17.72■□□□□ 0.43
ABCD4-227ENST00000557554 GOLGA3Q08378 1498 aa17.7■□□□□ 0.42
ABCD4-227ENST00000557554 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
ABCD4-227ENST00000557554 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.41
ABCD4-227ENST00000557554 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
ABCD4-227ENST00000557554 SIGLEC1Q9BZZ2 1709 aa17.62■□□□□ 0.41
ABCD4-227ENST00000557554 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
ABCD4-227ENST00000557554 SPATA31D1Q6ZQQ2 1576 aa17.62■□□□□ 0.41
ABCD4-227ENST00000557554 RICTORQ6R327 1708 aa17.6■□□□□ 0.41
ABCD4-227ENST00000557554 STRCQ7RTU9 1775 aa17.59■□□□□ 0.41
ABCD4-227ENST00000557554 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
ABCD4-227ENST00000557554 YEATS2Q9ULM3 1422 aa17.59■□□□□ 0.41
ABCD4-227ENST00000557554 DENND4BO75064 1496 aaPredicted RBP17.58■□□□□ 0.41
ABCD4-227ENST00000557554 POGZQ7Z3K3 1410 aa17.58■□□□□ 0.41
ABCD4-227ENST00000557554 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
ABCD4-227ENST00000557554 FANCAO15360 1455 aa17.56■□□□□ 0.4
ABCD4-227ENST00000557554 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
ABCD4-227ENST00000557554 AKNAQ7Z591 1439 aa17.54■□□□□ 0.4
ABCD4-227ENST00000557554 P3H3Q8IVL6 736 aa17.53■□□□□ 0.4
ABCD4-227ENST00000557554 MLECQ14165 292 aa17.52■□□□□ 0.4
ABCD4-227ENST00000557554 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.4
ABCD4-227ENST00000557554 ZMYM4Q5VZL5 1548 aa17.52■□□□□ 0.39
ABCD4-227ENST00000557554 CEBPAP49715 358 aaPredicted RBP17.51■□□□□ 0.39
ABCD4-227ENST00000557554 PREX1Q8TCU6 1659 aa17.51■□□□□ 0.39
ABCD4-227ENST00000557554 FER1L4A9Z1Z3 1794 aa17.51■□□□□ 0.39
ABCD4-227ENST00000557554 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
ABCD4-227ENST00000557554 ZFYVE16Q7Z3T8 1539 aa17.48■□□□□ 0.39
ABCD4-227ENST00000557554 PRXQ9BXM0 1461 aa17.48■□□□□ 0.39
ABCD4-227ENST00000557554 ARHGEF12Q9NZN5 1544 aa17.47■□□□□ 0.39
ABCD4-227ENST00000557554 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
ABCD4-227ENST00000557554 SETD1BQ9UPS6 1966 aaKnown RBP17.47■□□□□ 0.39
ABCD4-227ENST00000557554 EFCAB5A4FU69 1503 aa17.47■□□□□ 0.39
ABCD4-227ENST00000557554 PTPRTO14522 1441 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms