RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 KDM4FA0A1W2PPD8 638 aa26.93■■□□□ 1.9
TUBB3-214ENST00000557490 NUP160Q12769 1436 aa26.92■■□□□ 1.9
TUBB3-214ENST00000557490 CUL7Q14999 1698 aa26.84■■□□□ 1.89
TUBB3-214ENST00000557490 ABCC10Q5T3U5 1492 aa26.83■■□□□ 1.89
TUBB3-214ENST00000557490 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.88
TUBB3-214ENST00000557490 FAM69CQ0P6D2 419 aa26.81■■□□□ 1.88
TUBB3-214ENST00000557490 KDM6BO15054 1643 aa26.78■■□□□ 1.88
TUBB3-214ENST00000557490 DIP2BQ9P265 1576 aa26.76■■□□□ 1.87
TUBB3-214ENST00000557490 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.87
TUBB3-214ENST00000557490 MAPKBP1O60336 1514 aa26.73■■□□□ 1.87
TUBB3-214ENST00000557490 PRG4Q92954 1404 aaPredicted RBP26.72■■□□□ 1.87
TUBB3-214ENST00000557490 JPH4Q96JJ6 628 aa26.68■■□□□ 1.86
TUBB3-214ENST00000557490 KIAA0586Q9BVV6 1533 aa26.65■■□□□ 1.86
TUBB3-214ENST00000557490 RAPGEF2Q9Y4G8 1499 aa26.64■■□□□ 1.86
TUBB3-214ENST00000557490 TSPOAP1O95153 1857 aa26.63■■□□□ 1.85
TUBB3-214ENST00000557490 NPM1P06748 294 aaKnown RBP eCLIP26.61■■□□□ 1.85
TUBB3-214ENST00000557490 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
TUBB3-214ENST00000557490 ADCY10Q96PN6 1610 aa26.6■■□□□ 1.85
TUBB3-214ENST00000557490 EEA1Q15075 1411 aa26.52■■□□□ 1.84
TUBB3-214ENST00000557490 CSRNP3Q8WYN3 585 aa26.52■■□□□ 1.84
TUBB3-214ENST00000557490 ADGRL1O94910 1474 aa26.5■■□□□ 1.83
TUBB3-214ENST00000557490 PRXQ9BXM0 1461 aa26.5■■□□□ 1.83
TUBB3-214ENST00000557490 HECW2Q9P2P5 1572 aa26.48■■□□□ 1.83
TUBB3-214ENST00000557490 IQGAP2Q13576 1575 aa26.46■■□□□ 1.83
TUBB3-214ENST00000557490 FAM9AQ8IZU1 332 aaPredicted RBP26.44■■□□□ 1.82
TUBB3-214ENST00000557490 CARMIL2Q6F5E8 1435 aa26.4■■□□□ 1.82
TUBB3-214ENST00000557490 PPRC1Q5VV67 1664 aaKnown RBP26.35■■□□□ 1.81
TUBB3-214ENST00000557490 UGGT2Q9NYU1 1516 aa26.32■■□□□ 1.8
TUBB3-214ENST00000557490 TNIKQ9UKE5 1360 aa26.31■■□□□ 1.8
TUBB3-214ENST00000557490 PTPRGP23470 1445 aa26.31■■□□□ 1.8
TUBB3-214ENST00000557490 CTTNBP2Q8WZ74 1663 aa26.29■■□□□ 1.8
TUBB3-214ENST00000557490 TTBK1Q5TCY1 1321 aaPredicted RBP26.29■■□□□ 1.8
TUBB3-214ENST00000557490 DISP1Q96F81 1524 aa26.28■■□□□ 1.8
TUBB3-214ENST00000557490 GLI2P10070 1586 aa26.24■■□□□ 1.79
TUBB3-214ENST00000557490 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
TUBB3-214ENST00000557490 GOLGA3Q08378 1498 aa26.22■■□□□ 1.79
TUBB3-214ENST00000557490 KIAA0556O60303 1618 aa26.2■■□□□ 1.78
TUBB3-214ENST00000557490 KIF21BO75037 1637 aa26.19■■□□□ 1.78
TUBB3-214ENST00000557490 ASXL2Q76L83 1435 aa26.19■■□□□ 1.78
TUBB3-214ENST00000557490 FBXO41Q8TF61 875 aa26.18■■□□□ 1.78
TUBB3-214ENST00000557490 ABCC2Q92887 1545 aa26.18■■□□□ 1.78
TUBB3-214ENST00000557490 PLB1Q6P1J6 1458 aa26.16■■□□□ 1.78
TUBB3-214ENST00000557490 UACAQ9BZF9 1416 aa26.11■■□□□ 1.77
TUBB3-214ENST00000557490 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
TUBB3-214ENST00000557490 MAP3K4Q9Y6R4 1608 aa26.09■■□□□ 1.77
TUBB3-214ENST00000557490 UBTFP17480 764 aaKnown RBP26.08■■□□□ 1.77
TUBB3-214ENST00000557490 UHRF1BP1LA0JNW5 1464 aa26.07■■□□□ 1.76
TUBB3-214ENST00000557490 RANGAP1P46060 587 aaPredicted RBP26.06■■□□□ 1.76
TUBB3-214ENST00000557490 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
TUBB3-214ENST00000557490 TEX14Q8IWB6 1497 aa26.04■■□□□ 1.76
TUBB3-214ENST00000557490 EPRSP07814 1512 aaKnown RBP26.03■■□□□ 1.76
TUBB3-214ENST00000557490 SAMD9Q5K651 1589 aa25.99■■□□□ 1.75
TUBB3-214ENST00000557490 KDM5BQ9UGL1 1544 aa25.93■■□□□ 1.74
TUBB3-214ENST00000557490 ABCA8O94911 1581 aa25.92■■□□□ 1.74
TUBB3-214ENST00000557490 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
TUBB3-214ENST00000557490 FHOD3Q2V2M9 1422 aa25.88■■□□□ 1.73
TUBB3-214ENST00000557490 ZCCHC11Q5TAX3 1644 aaKnown RBP25.88■■□□□ 1.73
TUBB3-214ENST00000557490 LMTK3Q96Q04 1460 aa25.81■■□□□ 1.72
TUBB3-214ENST00000557490 ARID3CA6NKF2 412 aa25.78■■□□□ 1.72
TUBB3-214ENST00000557490 WDR7Q9Y4E6 1490 aa25.77■■□□□ 1.72
TUBB3-214ENST00000557490 RAPGEF6Q8TEU7 1601 aa25.77■■□□□ 1.72
TUBB3-214ENST00000557490 ARHGAP35Q9NRY4 1499 aa25.76■■□□□ 1.71
TUBB3-214ENST00000557490 MAGI3Q5TCQ9 1506 aa25.74■■□□□ 1.71
TUBB3-214ENST00000557490 ATP10BO94823 1461 aa25.73■■□□□ 1.71
TUBB3-214ENST00000557490 CFAP43Q8NDM7 1665 aa25.71■■□□□ 1.71
TUBB3-214ENST00000557490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.71■■□□□ 1.71
TUBB3-214ENST00000557490 HNRNPUL2Q1KMD3 747 aaKnown RBP25.71■■□□□ 1.71
TUBB3-214ENST00000557490 PTPRMP28827 1452 aa25.71■■□□□ 1.71
TUBB3-214ENST00000557490 FMN1Q68DA7 1419 aa25.7■■□□□ 1.7
TUBB3-214ENST00000557490 CD109Q6YHK3 1445 aa25.7■■□□□ 1.7
TUBB3-214ENST00000557490 NUP153P49790 1475 aaKnown RBP25.69■■□□□ 1.7
TUBB3-214ENST00000557490 ADAMTSL3P82987 1691 aa25.68■■□□□ 1.7
TUBB3-214ENST00000557490 KCNH8Q96L42 1107 aa25.68■■□□□ 1.7
TUBB3-214ENST00000557490 PCF11O94913 1555 aaKnown RBP25.65■■□□□ 1.7
TUBB3-214ENST00000557490 CLIP1P30622 1438 aa25.63■■□□□ 1.69
TUBB3-214ENST00000557490 ATP1B4Q9UN42 357 aaPredicted RBP25.62■■□□□ 1.69
TUBB3-214ENST00000557490 ARAP3Q8WWN8 1544 aa25.58■■□□□ 1.68
TUBB3-214ENST00000557490 PLEKHD1A6NEE1 506 aa25.57■■□□□ 1.68
TUBB3-214ENST00000557490 ILDR2Q71H61 639 aa25.54■■□□□ 1.68
TUBB3-214ENST00000557490 HECW1Q76N89 1606 aa25.54■■□□□ 1.68
TUBB3-214ENST00000557490 LOC105371045A0A1W2PR82 267 aa25.53■■□□□ 1.68
TUBB3-214ENST00000557490 SOCS7O14512 581 aa25.53■■□□□ 1.68
TUBB3-214ENST00000557490 MADDQ8WXG6 1647 aa25.52■■□□□ 1.68
TUBB3-214ENST00000557490 BCORL1Q5H9F3 1711 aa25.51■■□□□ 1.68
TUBB3-214ENST00000557490 CDK13Q14004 1512 aaKnown RBP25.5■■□□□ 1.67
TUBB3-214ENST00000557490 CEP162Q5TB80 1403 aa25.48■■□□□ 1.67
TUBB3-214ENST00000557490 CASKIN1Q8WXD9 1431 aa25.47■■□□□ 1.67
TUBB3-214ENST00000557490 CDK11AQ9UQ88 783 aaPredicted RBP25.47■■□□□ 1.67
TUBB3-214ENST00000557490 DISP3Q9P2K9 1392 aa25.46■■□□□ 1.67
TUBB3-214ENST00000557490 CERKQ8TCT0 537 aa25.44■■□□□ 1.66
TUBB3-214ENST00000557490 ABCA9Q8IUA7 1624 aa25.42■■□□□ 1.66
TUBB3-214ENST00000557490 HSPA2P54652 639 aa25.4■■□□□ 1.66
TUBB3-214ENST00000557490 FYCO1Q9BQS8 1478 aa25.4■■□□□ 1.66
TUBB3-214ENST00000557490 RIMS1Q86UR5 1692 aaKnown RBP25.39■■□□□ 1.66
TUBB3-214ENST00000557490 CCDC18Q5T9S5 1454 aa25.39■■□□□ 1.65
TUBB3-214ENST00000557490 RAPGEF3O95398 923 aa25.37■■□□□ 1.65
TUBB3-214ENST00000557490 PHLDB1Q86UU1 1377 aa25.36■■□□□ 1.65
TUBB3-214ENST00000557490 ARID4BQ4LE39 1312 aaPredicted RBP25.36■■□□□ 1.65
TUBB3-214ENST00000557490 FRMPD1Q5SYB0 1578 aa25.35■■□□□ 1.65
TUBB3-214ENST00000557490 TROQ12816 1431 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms