RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
SLIRP-210ENST00000557431 ADCY10Q96PN6 1610 aa24.94■■□□□ 1.58
SLIRP-210ENST00000557431 CUL7Q14999 1698 aa24.92■■□□□ 1.58
SLIRP-210ENST00000557431 TSPOAP1O95153 1857 aa24.89■■□□□ 1.58
SLIRP-210ENST00000557431 DIP2BQ9P265 1576 aa24.85■■□□□ 1.57
SLIRP-210ENST00000557431 IGF1RP08069 1367 aa24.85■■□□□ 1.57
SLIRP-210ENST00000557431 KIF27Q86VH2 1401 aa24.84■■□□□ 1.57
SLIRP-210ENST00000557431 KIAA0586Q9BVV6 1533 aa24.83■■□□□ 1.57
SLIRP-210ENST00000557431 ABCC10Q5T3U5 1492 aa24.81■■□□□ 1.56
SLIRP-210ENST00000557431 MAPKBP1O60336 1514 aa24.81■■□□□ 1.56
SLIRP-210ENST00000557431 FAM69CQ0P6D2 419 aa24.79■■□□□ 1.56
SLIRP-210ENST00000557431 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
SLIRP-210ENST00000557431 NPM1P06748 294 aaKnown RBP eCLIP24.75■■□□□ 1.55
SLIRP-210ENST00000557431 CARMIL1Q5VZK9 1371 aa24.7■■□□□ 1.55
SLIRP-210ENST00000557431 KDM6BO15054 1643 aa24.68■■□□□ 1.54
SLIRP-210ENST00000557431 IQGAP2Q13576 1575 aa24.67■■□□□ 1.54
SLIRP-210ENST00000557431 PTPRGP23470 1445 aa24.63■■□□□ 1.53
SLIRP-210ENST00000557431 PPRC1Q5VV67 1664 aaKnown RBP24.59■■□□□ 1.53
SLIRP-210ENST00000557431 TNIKQ9UKE5 1360 aa24.57■■□□□ 1.52
SLIRP-210ENST00000557431 CARMIL2Q6F5E8 1435 aa24.56■■□□□ 1.52
SLIRP-210ENST00000557431 ABCC2Q92887 1545 aa24.56■■□□□ 1.52
SLIRP-210ENST00000557431 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
SLIRP-210ENST00000557431 ASXL2Q76L83 1435 aa24.51■■□□□ 1.51
SLIRP-210ENST00000557431 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
SLIRP-210ENST00000557431 KIAA0556O60303 1618 aa24.49■■□□□ 1.51
SLIRP-210ENST00000557431 ZCCHC11Q5TAX3 1644 aaKnown RBP24.48■■□□□ 1.51
SLIRP-210ENST00000557431 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
SLIRP-210ENST00000557431 UACAQ9BZF9 1416 aa24.45■■□□□ 1.51
SLIRP-210ENST00000557431 GLI2P10070 1586 aa24.45■■□□□ 1.5
SLIRP-210ENST00000557431 UGGT2Q9NYU1 1516 aa24.45■■□□□ 1.5
SLIRP-210ENST00000557431 UHRF1BP1LA0JNW5 1464 aa24.45■■□□□ 1.5
SLIRP-210ENST00000557431 KDM4FA0A1W2PPD8 638 aa24.44■■□□□ 1.5
SLIRP-210ENST00000557431 PLB1Q6P1J6 1458 aa24.43■■□□□ 1.5
SLIRP-210ENST00000557431 MAP3K4Q9Y6R4 1608 aa24.41■■□□□ 1.5
SLIRP-210ENST00000557431 KDM5BQ9UGL1 1544 aa24.38■■□□□ 1.49
SLIRP-210ENST00000557431 EPRSP07814 1512 aaKnown RBP24.36■■□□□ 1.49
SLIRP-210ENST00000557431 COL17A1Q9UMD9 1497 aaPredicted RBP24.32■■□□□ 1.48
SLIRP-210ENST00000557431 ADGRL1O94910 1474 aa24.25■■□□□ 1.47
SLIRP-210ENST00000557431 WDR7Q9Y4E6 1490 aa24.24■■□□□ 1.47
SLIRP-210ENST00000557431 ABCA8O94911 1581 aa24.23■■□□□ 1.47
SLIRP-210ENST00000557431 CFAP43Q8NDM7 1665 aa24.2■■□□□ 1.46
SLIRP-210ENST00000557431 TEX14Q8IWB6 1497 aa24.19■■□□□ 1.46
SLIRP-210ENST00000557431 GOLGA3Q08378 1498 aa24.17■■□□□ 1.46
SLIRP-210ENST00000557431 PRXQ9BXM0 1461 aa24.17■■□□□ 1.46
SLIRP-210ENST00000557431 ARID3CA6NKF2 412 aa24.13■■□□□ 1.45
SLIRP-210ENST00000557431 KCNH8Q96L42 1107 aa24.13■■□□□ 1.45
SLIRP-210ENST00000557431 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
SLIRP-210ENST00000557431 CD109Q6YHK3 1445 aa24.09■■□□□ 1.45
SLIRP-210ENST00000557431 KIF21BO75037 1637 aa24.07■■□□□ 1.44
SLIRP-210ENST00000557431 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
SLIRP-210ENST00000557431 SAMD9Q5K651 1589 aa24.02■■□□□ 1.44
SLIRP-210ENST00000557431 HECW2Q9P2P5 1572 aa24.02■■□□□ 1.44
SLIRP-210ENST00000557431 ATP10BO94823 1461 aa23.99■■□□□ 1.43
SLIRP-210ENST00000557431 RAPGEF6Q8TEU7 1601 aa23.99■■□□□ 1.43
SLIRP-210ENST00000557431 ABCA9Q8IUA7 1624 aa23.95■■□□□ 1.42
SLIRP-210ENST00000557431 RANGAP1P46060 587 aaPredicted RBP23.93■■□□□ 1.42
SLIRP-210ENST00000557431 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
SLIRP-210ENST00000557431 ILDR1Q86SU0 546 aaPredicted RBP23.87■■□□□ 1.41
SLIRP-210ENST00000557431 ARAP3Q8WWN8 1544 aa23.87■■□□□ 1.41
SLIRP-210ENST00000557431 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
SLIRP-210ENST00000557431 FAM9AQ8IZU1 332 aaPredicted RBP23.84■■□□□ 1.41
SLIRP-210ENST00000557431 FRMPD1Q5SYB0 1578 aa23.83■■□□□ 1.41
SLIRP-210ENST00000557431 NUP153P49790 1475 aaKnown RBP23.83■■□□□ 1.41
SLIRP-210ENST00000557431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.41
SLIRP-210ENST00000557431 HNRNPUL2Q1KMD3 747 aaKnown RBP23.83■■□□□ 1.41
SLIRP-210ENST00000557431 RAPGEF3O95398 923 aa23.79■■□□□ 1.4
SLIRP-210ENST00000557431 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
SLIRP-210ENST00000557431 BCORL1Q5H9F3 1711 aa23.75■■□□□ 1.39
SLIRP-210ENST00000557431 RICTORQ6R327 1708 aa23.75■■□□□ 1.39
SLIRP-210ENST00000557431 NEO1Q92859 1461 aa23.74■■□□□ 1.39
SLIRP-210ENST00000557431 MADDQ8WXG6 1647 aa23.73■■□□□ 1.39
SLIRP-210ENST00000557431 EEA1Q15075 1411 aa23.72■■□□□ 1.39
SLIRP-210ENST00000557431 TTC37Q6PGP7 1564 aa23.72■■□□□ 1.39
SLIRP-210ENST00000557431 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
SLIRP-210ENST00000557431 CDK13Q14004 1512 aaKnown RBP23.69■■□□□ 1.38
SLIRP-210ENST00000557431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.69■■□□□ 1.38
SLIRP-210ENST00000557431 RIMS1Q86UR5 1692 aaKnown RBP23.68■■□□□ 1.38
SLIRP-210ENST00000557431 PTPRMP28827 1452 aa23.68■■□□□ 1.38
SLIRP-210ENST00000557431 SIGLEC1Q9BZZ2 1709 aa23.67■■□□□ 1.38
SLIRP-210ENST00000557431 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
SLIRP-210ENST00000557431 ARHGEF40Q8TER5 1519 aa23.66■■□□□ 1.38
SLIRP-210ENST00000557431 EFCAB5A4FU69 1503 aa23.65■■□□□ 1.38
SLIRP-210ENST00000557431 CFAP74Q9C0B2 1584 aa23.64■■□□□ 1.37
SLIRP-210ENST00000557431 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
SLIRP-210ENST00000557431 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
SLIRP-210ENST00000557431 FANCAO15360 1455 aa23.61■■□□□ 1.37
SLIRP-210ENST00000557431 AKNAQ7Z591 1439 aa23.6■■□□□ 1.37
SLIRP-210ENST00000557431 DENND4BO75064 1496 aaPredicted RBP23.6■■□□□ 1.37
SLIRP-210ENST00000557431 LRRIQ1Q96JM4 1722 aa23.58■■□□□ 1.37
SLIRP-210ENST00000557431 MYO5CQ9NQX4 1742 aa23.55■■□□□ 1.36
SLIRP-210ENST00000557431 YEATS2Q9ULM3 1422 aa23.53■■□□□ 1.36
SLIRP-210ENST00000557431 HECW1Q76N89 1606 aa23.53■■□□□ 1.36
SLIRP-210ENST00000557431 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
SLIRP-210ENST00000557431 ZMYM4Q5VZL5 1548 aa23.53■■□□□ 1.36
SLIRP-210ENST00000557431 FER1L4A9Z1Z3 1794 aa23.52■■□□□ 1.36
SLIRP-210ENST00000557431 ZFYVE16Q7Z3T8 1539 aa23.52■■□□□ 1.36
SLIRP-210ENST00000557431 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
SLIRP-210ENST00000557431 KIF14Q15058 1648 aa23.51■■□□□ 1.35
SLIRP-210ENST00000557431 ATP1B4Q9UN42 357 aaPredicted RBP23.51■■□□□ 1.35
SLIRP-210ENST00000557431 UBTFP17480 764 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms