RNA–Protein interactions for RNA: ENST00000557150.5

APEX1-215, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-215ENST00000557150 MAGI1Q96QZ7 1491 aaPredicted RBP19.13■□□□□ 0.65
APEX1-215ENST00000557150 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
APEX1-215ENST00000557150 TRIM26Q12899 539 aaPredicted RBP19.1■□□□□ 0.65
APEX1-215ENST00000557150 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
APEX1-215ENST00000557150 SYNJ2O15056 1496 aa19.04■□□□□ 0.64
APEX1-215ENST00000557150 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
APEX1-215ENST00000557150 PCGF6Q9BYE7 350 aa19.01■□□□□ 0.63
APEX1-215ENST00000557150 SAMD9Q5K651 1589 aa19■□□□□ 0.63
APEX1-215ENST00000557150 IQGAP2Q13576 1575 aa18.99■□□□□ 0.63
APEX1-215ENST00000557150 APLP2Q06481 763 aa18.98■□□□□ 0.63
APEX1-215ENST00000557150 KIAA0586Q9BVV6 1533 aa18.97■□□□□ 0.63
APEX1-215ENST00000557150 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
APEX1-215ENST00000557150 PPARGC1BQ86YN6 1023 aaKnown RBP18.94■□□□□ 0.62
APEX1-215ENST00000557150 UGGT2Q9NYU1 1516 aa18.93■□□□□ 0.62
APEX1-215ENST00000557150 FHOD3Q2V2M9 1422 aa18.92■□□□□ 0.62
APEX1-215ENST00000557150 NUP160Q12769 1436 aa18.91■□□□□ 0.62
APEX1-215ENST00000557150 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
APEX1-215ENST00000557150 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
APEX1-215ENST00000557150 CEP170Q5SW79 1584 aa18.89■□□□□ 0.62
APEX1-215ENST00000557150 P3H3Q8IVL6 736 aa18.89■□□□□ 0.61
APEX1-215ENST00000557150 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
APEX1-215ENST00000557150 FYCO1Q9BQS8 1478 aa18.86■□□□□ 0.61
APEX1-215ENST00000557150 CASKIN1Q8WXD9 1431 aa18.86■□□□□ 0.61
APEX1-215ENST00000557150 FBLN2P98095 1184 aa18.85■□□□□ 0.61
APEX1-215ENST00000557150 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
APEX1-215ENST00000557150 KIAA0556O60303 1618 aa18.8■□□□□ 0.6
APEX1-215ENST00000557150 CHD1O14646 1710 aa18.8■□□□□ 0.6
APEX1-215ENST00000557150 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
APEX1-215ENST00000557150 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
APEX1-215ENST00000557150 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.6
APEX1-215ENST00000557150 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
APEX1-215ENST00000557150 CARMIL2Q6F5E8 1435 aa18.74■□□□□ 0.59
APEX1-215ENST00000557150 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
APEX1-215ENST00000557150 LRRC9Q6ZRR7 1453 aa18.72■□□□□ 0.59
APEX1-215ENST00000557150 HECW1Q76N89 1606 aa18.71■□□□□ 0.58
APEX1-215ENST00000557150 ATP1B4Q9UN42 357 aaPredicted RBP18.69■□□□□ 0.58
APEX1-215ENST00000557150 CCDC18Q5T9S5 1454 aa18.68■□□□□ 0.58
APEX1-215ENST00000557150 LRRIQ1Q96JM4 1722 aa18.66■□□□□ 0.58
APEX1-215ENST00000557150 SHROOM2Q13796 1616 aa18.65■□□□□ 0.58
APEX1-215ENST00000557150 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
APEX1-215ENST00000557150 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
APEX1-215ENST00000557150 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
APEX1-215ENST00000557150 EPRSP07814 1512 aaKnown RBP18.61■□□□□ 0.57
APEX1-215ENST00000557150 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
APEX1-215ENST00000557150 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
APEX1-215ENST00000557150 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
APEX1-215ENST00000557150 NUP153P49790 1475 aaKnown RBP18.56■□□□□ 0.56
APEX1-215ENST00000557150 ABCA8O94911 1581 aa18.54■□□□□ 0.56
APEX1-215ENST00000557150 CCNB3Q8WWL7 1395 aa18.54■□□□□ 0.56
APEX1-215ENST00000557150 HRCP23327 699 aa18.53■□□□□ 0.56
APEX1-215ENST00000557150 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
APEX1-215ENST00000557150 PLB1Q6P1J6 1458 aa18.52■□□□□ 0.56
APEX1-215ENST00000557150 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.56
APEX1-215ENST00000557150 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.56
APEX1-215ENST00000557150 PTPRGP23470 1445 aa18.51■□□□□ 0.55
APEX1-215ENST00000557150 MAGI3Q5TCQ9 1506 aa18.51■□□□□ 0.55
APEX1-215ENST00000557150 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
APEX1-215ENST00000557150 NCOA2Q15596 1464 aa18.48■□□□□ 0.55
APEX1-215ENST00000557150 CDK11AQ9UQ88 783 aaPredicted RBP18.47■□□□□ 0.55
APEX1-215ENST00000557150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.46■□□□□ 0.55
APEX1-215ENST00000557150 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
APEX1-215ENST00000557150 ERCC6L2Q5T890 1561 aa18.44■□□□□ 0.54
APEX1-215ENST00000557150 MYOM3Q5VTT5 1437 aa18.43■□□□□ 0.54
APEX1-215ENST00000557150 FGD6Q6ZV73 1430 aa18.42■□□□□ 0.54
APEX1-215ENST00000557150 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
APEX1-215ENST00000557150 TROQ12816 1431 aaPredicted RBP18.4■□□□□ 0.54
APEX1-215ENST00000557150 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
APEX1-215ENST00000557150 ATP10BO94823 1461 aa18.39■□□□□ 0.54
APEX1-215ENST00000557150 ARID3CA6NKF2 412 aa18.39■□□□□ 0.53
APEX1-215ENST00000557150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.39■□□□□ 0.53
APEX1-215ENST00000557150 ZEB1P37275 1124 aaPredicted RBP18.39■□□□□ 0.53
APEX1-215ENST00000557150 ADCY10Q96PN6 1610 aa18.38■□□□□ 0.53
APEX1-215ENST00000557150 ABCC2Q92887 1545 aa18.37■□□□□ 0.53
APEX1-215ENST00000557150 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
APEX1-215ENST00000557150 MIA2Q96PC5 1412 aa18.35■□□□□ 0.53
APEX1-215ENST00000557150 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
APEX1-215ENST00000557150 TCOF1Q13428 1488 aaKnown RBP18.33■□□□□ 0.53
APEX1-215ENST00000557150 PLEKHD1A6NEE1 506 aa18.33■□□□□ 0.52
APEX1-215ENST00000557150 PTPN23Q9H3S7 1636 aa18.33■□□□□ 0.52
APEX1-215ENST00000557150 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
APEX1-215ENST00000557150 KIF14Q15058 1648 aa18.28■□□□□ 0.52
APEX1-215ENST00000557150 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
APEX1-215ENST00000557150 ITGAEP38570 1179 aa18.27■□□□□ 0.52
APEX1-215ENST00000557150 KDM5BQ9UGL1 1544 aa18.25■□□□□ 0.51
APEX1-215ENST00000557150 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
APEX1-215ENST00000557150 ZCCHC11Q5TAX3 1644 aaKnown RBP18.23■□□□□ 0.51
APEX1-215ENST00000557150 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
APEX1-215ENST00000557150 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
APEX1-215ENST00000557150 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
APEX1-215ENST00000557150 PTPRKQ15262 1439 aa18.17■□□□□ 0.5
APEX1-215ENST00000557150 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
APEX1-215ENST00000557150 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
APEX1-215ENST00000557150 DNMT1P26358 1616 aaKnown RBP18.16■□□□□ 0.5
APEX1-215ENST00000557150 HFM1A2PYH4 1435 aa18.15■□□□□ 0.5
APEX1-215ENST00000557150 AKNAQ7Z591 1439 aa18.15■□□□□ 0.5
APEX1-215ENST00000557150 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.5
APEX1-215ENST00000557150 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
APEX1-215ENST00000557150 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.49
APEX1-215ENST00000557150 PREX2Q70Z35 1606 aa18.12■□□□□ 0.49
APEX1-215ENST00000557150 DAPK1P53355 1430 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms