RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
HNRNPC-227ENST00000556897 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
HNRNPC-227ENST00000556897 FAM69CQ0P6D2 419 aa16.11■□□□□ 0.17
HNRNPC-227ENST00000556897 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
HNRNPC-227ENST00000556897 ABCC10Q5T3U5 1492 aa16.09■□□□□ 0.17
HNRNPC-227ENST00000556897 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
HNRNPC-227ENST00000556897 ADCY10Q96PN6 1610 aa16.05■□□□□ 0.16
HNRNPC-227ENST00000556897 DIP2BQ9P265 1576 aa16.03■□□□□ 0.16
HNRNPC-227ENST00000556897 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
HNRNPC-227ENST00000556897 IGF1RP08069 1367 aa16.01■□□□□ 0.15
HNRNPC-227ENST00000556897 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
HNRNPC-227ENST00000556897 KDM6BO15054 1643 aa15.95■□□□□ 0.14
HNRNPC-227ENST00000556897 CUL7Q14999 1698 aa15.95■□□□□ 0.14
HNRNPC-227ENST00000556897 TSPOAP1O95153 1857 aa15.94■□□□□ 0.14
HNRNPC-227ENST00000556897 PTPRGP23470 1445 aa15.94■□□□□ 0.14
HNRNPC-227ENST00000556897 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
HNRNPC-227ENST00000556897 KDM4FA0A1W2PPD8 638 aa15.93■□□□□ 0.14
HNRNPC-227ENST00000556897 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
HNRNPC-227ENST00000556897 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
HNRNPC-227ENST00000556897 ABCC2Q92887 1545 aa15.87■□□□□ 0.13
HNRNPC-227ENST00000556897 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
HNRNPC-227ENST00000556897 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
HNRNPC-227ENST00000556897 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
HNRNPC-227ENST00000556897 IQGAP2Q13576 1575 aa15.82■□□□□ 0.12
HNRNPC-227ENST00000556897 GLI2P10070 1586 aa15.79■□□□□ 0.12
HNRNPC-227ENST00000556897 UHRF1BP1LA0JNW5 1464 aa15.79■□□□□ 0.12
HNRNPC-227ENST00000556897 UACAQ9BZF9 1416 aa15.79■□□□□ 0.12
HNRNPC-227ENST00000556897 PPRC1Q5VV67 1664 aaKnown RBP15.79■□□□□ 0.12
HNRNPC-227ENST00000556897 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
HNRNPC-227ENST00000556897 EPRSP07814 1512 aaKnown RBP15.74■□□□□ 0.11
HNRNPC-227ENST00000556897 COL17A1Q9UMD9 1497 aaPredicted RBP15.74■□□□□ 0.11
HNRNPC-227ENST00000556897 KDM5BQ9UGL1 1544 aa15.73■□□□□ 0.11
HNRNPC-227ENST00000556897 ADGRL1O94910 1474 aa15.73■□□□□ 0.11
HNRNPC-227ENST00000556897 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
HNRNPC-227ENST00000556897 UGGT2Q9NYU1 1516 aa15.71■□□□□ 0.11
HNRNPC-227ENST00000556897 MAP3K4Q9Y6R4 1608 aa15.71■□□□□ 0.11
HNRNPC-227ENST00000556897 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.1
HNRNPC-227ENST00000556897 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
HNRNPC-227ENST00000556897 ILDR1Q86SU0 546 aaPredicted RBP15.69■□□□□ 0.1
HNRNPC-227ENST00000556897 TEX14Q8IWB6 1497 aa15.69■□□□□ 0.1
HNRNPC-227ENST00000556897 KIAA0556O60303 1618 aa15.68■□□□□ 0.1
HNRNPC-227ENST00000556897 WDR7Q9Y4E6 1490 aa15.65■□□□□ 0.1
HNRNPC-227ENST00000556897 SENP3Q9H4L4 574 aaPredicted RBP15.63■□□□□ 0.09
HNRNPC-227ENST00000556897 KCNH8Q96L42 1107 aa15.59■□□□□ 0.09
HNRNPC-227ENST00000556897 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.09
HNRNPC-227ENST00000556897 CD109Q6YHK3 1445 aa15.58■□□□□ 0.08
HNRNPC-227ENST00000556897 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
HNRNPC-227ENST00000556897 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
HNRNPC-227ENST00000556897 MAGI3Q5TCQ9 1506 aa15.56■□□□□ 0.08
HNRNPC-227ENST00000556897 ABCA8O94911 1581 aa15.56■□□□□ 0.08
HNRNPC-227ENST00000556897 CFAP43Q8NDM7 1665 aa15.54■□□□□ 0.08
HNRNPC-227ENST00000556897 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
HNRNPC-227ENST00000556897 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
HNRNPC-227ENST00000556897 KIF21BO75037 1637 aa15.46■□□□□ 0.07
HNRNPC-227ENST00000556897 P3H3Q8IVL6 736 aa15.46■□□□□ 0.07
HNRNPC-227ENST00000556897 ARAP3Q8WWN8 1544 aa15.45■□□□□ 0.06
HNRNPC-227ENST00000556897 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
HNRNPC-227ENST00000556897 ATP10BO94823 1461 aa15.44■□□□□ 0.06
HNRNPC-227ENST00000556897 ABCA9Q8IUA7 1624 aa15.39■□□□□ 0.05
HNRNPC-227ENST00000556897 RAPGEF3O95398 923 aa15.39■□□□□ 0.05
HNRNPC-227ENST00000556897 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
HNRNPC-227ENST00000556897 PTPRMP28827 1452 aa15.36■□□□□ 0.05
HNRNPC-227ENST00000556897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
HNRNPC-227ENST00000556897 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
HNRNPC-227ENST00000556897 SAMD9Q5K651 1589 aa15.35■□□□□ 0.05
HNRNPC-227ENST00000556897 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
HNRNPC-227ENST00000556897 NEO1Q92859 1461 aa15.34■□□□□ 0.05
HNRNPC-227ENST00000556897 RAPGEF6Q8TEU7 1601 aa15.34■□□□□ 0.05
HNRNPC-227ENST00000556897 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
HNRNPC-227ENST00000556897 ARID4BQ4LE39 1312 aaPredicted RBP15.32■□□□□ 0.04
HNRNPC-227ENST00000556897 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
HNRNPC-227ENST00000556897 FBXO41Q8TF61 875 aa15.31■□□□□ 0.04
HNRNPC-227ENST00000556897 NUP153P49790 1475 aaKnown RBP15.31■□□□□ 0.04
HNRNPC-227ENST00000556897 FRMPD1Q5SYB0 1578 aa15.31■□□□□ 0.04
HNRNPC-227ENST00000556897 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
HNRNPC-227ENST00000556897 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
HNRNPC-227ENST00000556897 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
HNRNPC-227ENST00000556897 PLEKHD1A6NEE1 506 aa15.26■□□□□ 0.03
HNRNPC-227ENST00000556897 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
HNRNPC-227ENST00000556897 LMTK3Q96Q04 1460 aa15.25■□□□□ 0.03
HNRNPC-227ENST00000556897 DENND4BO75064 1496 aaPredicted RBP15.24■□□□□ 0.03
HNRNPC-227ENST00000556897 ARHGEF40Q8TER5 1519 aa15.23■□□□□ 0.03
HNRNPC-227ENST00000556897 FANCAO15360 1455 aa15.23■□□□□ 0.03
HNRNPC-227ENST00000556897 AKNAQ7Z591 1439 aa15.23■□□□□ 0.03
HNRNPC-227ENST00000556897 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
HNRNPC-227ENST00000556897 RIMS1Q86UR5 1692 aaKnown RBP15.21■□□□□ 0.03
HNRNPC-227ENST00000556897 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
HNRNPC-227ENST00000556897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.2■□□□□ 0.02
HNRNPC-227ENST00000556897 HSPA2P54652 639 aa15.19■□□□□ 0.02
HNRNPC-227ENST00000556897 EEA1Q15075 1411 aa15.18■□□□□ 0.02
HNRNPC-227ENST00000556897 TTC37Q6PGP7 1564 aa15.18■□□□□ 0.02
HNRNPC-227ENST00000556897 CFAP74Q9C0B2 1584 aa15.18■□□□□ 0.02
HNRNPC-227ENST00000556897 YEATS2Q9ULM3 1422 aa15.17■□□□□ 0.02
HNRNPC-227ENST00000556897 ZMYM4Q5VZL5 1548 aa15.17■□□□□ 0.02
HNRNPC-227ENST00000556897 POGZQ7Z3K3 1410 aa15.17■□□□□ 0.02
HNRNPC-227ENST00000556897 ZFYVE16Q7Z3T8 1539 aa15.16■□□□□ 0.02
HNRNPC-227ENST00000556897 SIGLEC1Q9BZZ2 1709 aa15.15■□□□□ 0.02
HNRNPC-227ENST00000556897 EFCAB5A4FU69 1503 aa15.15■□□□□ 0.02
HNRNPC-227ENST00000556897 MLECQ14165 292 aa15.14■□□□□ 0.01
HNRNPC-227ENST00000556897 CDK13Q14004 1512 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms