RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 P3H3Q8IVL6 736 aa14.17□□□□□ -0.14
SPTB-208ENST00000556626 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
SPTB-208ENST00000556626 MSNP26038 577 aaKnown RBP14.14□□□□□ -0.15
SPTB-208ENST00000556626 FBLN2P98095 1184 aa14.14□□□□□ -0.15
SPTB-208ENST00000556626 L1TD1Q5T7N2 865 aaKnown RBP14.12□□□□□ -0.15
SPTB-208ENST00000556626 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
SPTB-208ENST00000556626 DEKP35659 375 aaKnown RBP14.12□□□□□ -0.15
SPTB-208ENST00000556626 SUPT16HQ9Y5B9 1047 aaKnown RBP14.12□□□□□ -0.15
SPTB-208ENST00000556626 EIF4G2P78344 907 aaKnown RBP eCLIP14.11□□□□□ -0.152e-8■■■■■ 33.5
SPTB-208ENST00000556626 NRDCO43847 1150 aa14.11□□□□□ -0.15
SPTB-208ENST00000556626 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
SPTB-208ENST00000556626 PPP4R2Q9NY27 417 aa14.09□□□□□ -0.15
SPTB-208ENST00000556626 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.15
SPTB-208ENST00000556626 PRKCSHP14314 528 aaPredicted RBP14.06□□□□□ -0.16
SPTB-208ENST00000556626 ESF1Q9H501 851 aaKnown RBP14.06□□□□□ -0.16
SPTB-208ENST00000556626 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
SPTB-208ENST00000556626 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
SPTB-208ENST00000556626 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
SPTB-208ENST00000556626 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.16
SPTB-208ENST00000556626 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
SPTB-208ENST00000556626 HIRIP3Q9BW71 556 aaPredicted RBP14.02□□□□□ -0.17
SPTB-208ENST00000556626 KDM2AQ9Y2K7 1162 aa14□□□□□ -0.17
SPTB-208ENST00000556626 ABCC9O60706 1549 aa14□□□□□ -0.17
SPTB-208ENST00000556626 HSCBQ8IWL3 235 aa13.99□□□□□ -0.17
SPTB-208ENST00000556626 MTUS2Q5JR59 1369 aa13.99□□□□□ -0.17
SPTB-208ENST00000556626 CLIP1P30622 1438 aa13.98□□□□□ -0.17
SPTB-208ENST00000556626 RGS3P49796 1198 aa13.97□□□□□ -0.17
SPTB-208ENST00000556626 CHIC2Q9UKJ5 165 aa13.97□□□□□ -0.17
SPTB-208ENST00000556626 PTMSP20962 102 aa13.96□□□□□ -0.17
SPTB-208ENST00000556626 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
SPTB-208ENST00000556626 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.18
SPTB-208ENST00000556626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.186e-6■□□□□ 8.3
SPTB-208ENST00000556626 DRC7Q8IY82 874 aa13.94□□□□□ -0.18
SPTB-208ENST00000556626 KNSTRNQ9Y448 316 aa13.94□□□□□ -0.18
SPTB-208ENST00000556626 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.94□□□□□ -0.18
SPTB-208ENST00000556626 RBM19Q9Y4C8 960 aaKnown RBP13.94□□□□□ -0.18
SPTB-208ENST00000556626 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
SPTB-208ENST00000556626 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
SPTB-208ENST00000556626 ARID4BQ4LE39 1312 aaPredicted RBP13.94□□□□□ -0.18
SPTB-208ENST00000556626 TNNT3P45378 269 aaPredicted RBP13.92□□□□□ -0.18
SPTB-208ENST00000556626 CDCA8Q53HL2 280 aa13.92□□□□□ -0.18
SPTB-208ENST00000556626 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
SPTB-208ENST00000556626 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
SPTB-208ENST00000556626 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
SPTB-208ENST00000556626 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
SPTB-208ENST00000556626 MS4A1P11836 297 aa13.91□□□□□ -0.18
SPTB-208ENST00000556626 KIAA2012Q0VF49 1180 aa13.9□□□□□ -0.18
SPTB-208ENST00000556626 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
SPTB-208ENST00000556626 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
SPTB-208ENST00000556626 TSPY4P0CV99 314 aa13.88□□□□□ -0.19
SPTB-208ENST00000556626 TSPY10P0CW01 314 aa13.88□□□□□ -0.19
SPTB-208ENST00000556626 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
SPTB-208ENST00000556626 FGD1P98174 961 aa13.87□□□□□ -0.19
SPTB-208ENST00000556626 GBP4Q96PP9 640 aa13.87□□□□□ -0.19
SPTB-208ENST00000556626 MCCP23508 829 aa13.86□□□□□ -0.19
SPTB-208ENST00000556626 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
SPTB-208ENST00000556626 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
SPTB-208ENST00000556626 KCNJ4P48050 445 aa13.84□□□□□ -0.19
SPTB-208ENST00000556626 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.19
SPTB-208ENST00000556626 EEA1Q15075 1411 aa13.83□□□□□ -0.2
SPTB-208ENST00000556626 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.2
SPTB-208ENST00000556626 MAPK8IP3Q9UPT6 1336 aa13.83□□□□□ -0.2
SPTB-208ENST00000556626 SYAP1Q96A49 352 aaPredicted RBP13.83□□□□□ -0.2
SPTB-208ENST00000556626 ARID3AQ99856 593 aa13.83□□□□□ -0.2
SPTB-208ENST00000556626 TULP1O00294 542 aaPredicted RBP13.81□□□□□ -0.2
SPTB-208ENST00000556626 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
SPTB-208ENST00000556626 GOLGA6L1Q8N7Z2 621 aa13.8□□□□□ -0.2
SPTB-208ENST00000556626 RRP7BPQ9NSQ0 103 aa13.79□□□□□ -0.2
SPTB-208ENST00000556626 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
SPTB-208ENST00000556626 GOLGA6L3A6NEY3 463 aa13.78□□□□□ -0.2
SPTB-208ENST00000556626 GZF1Q9H116 711 aaPredicted RBP13.78□□□□□ -0.2
SPTB-208ENST00000556626 NOC3LQ8WTT2 800 aaKnown RBP13.78□□□□□ -0.2
SPTB-208ENST00000556626 OS9Q13438 667 aaPredicted RBP13.78□□□□□ -0.2
SPTB-208ENST00000556626 NAP1L2Q9ULW6 460 aaPredicted RBP13.77□□□□□ -0.2
SPTB-208ENST00000556626 PKNOX2Q96KN3 472 aa13.77□□□□□ -0.2
SPTB-208ENST00000556626 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
SPTB-208ENST00000556626 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
SPTB-208ENST00000556626 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
SPTB-208ENST00000556626 CCER2I3L3R5 266 aa13.75□□□□□ -0.21
SPTB-208ENST00000556626 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
SPTB-208ENST00000556626 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
SPTB-208ENST00000556626 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
SPTB-208ENST00000556626 A0A0G2JS52 829 aa13.74□□□□□ -0.21
SPTB-208ENST00000556626 PHF14O94880 888 aa13.74□□□□□ -0.21
SPTB-208ENST00000556626 C14orf37Q86TY3 774 aa13.73□□□□□ -0.21
SPTB-208ENST00000556626 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
SPTB-208ENST00000556626 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
SPTB-208ENST00000556626 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
SPTB-208ENST00000556626 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
SPTB-208ENST00000556626 SETQ01105 290 aaPredicted RBP13.72□□□□□ -0.21
SPTB-208ENST00000556626 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
SPTB-208ENST00000556626 SLKQ9H2G2 1235 aaPredicted RBP13.7□□□□□ -0.22
SPTB-208ENST00000556626 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPTB-208ENST00000556626 HTATSF1O43719 755 aaKnown RBP13.7□□□□□ -0.22
SPTB-208ENST00000556626 TPM4P67936 248 aa13.69□□□□□ -0.22
SPTB-208ENST00000556626 PODXL2Q9NZ53 605 aa13.69□□□□□ -0.22
SPTB-208ENST00000556626 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
SPTB-208ENST00000556626 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
SPTB-208ENST00000556626 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
SPTB-208ENST00000556626 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms