RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 KIF27Q86VH2 1401 aa21.93■■□□□ 1.1
APEX1-213ENST00000556296 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
APEX1-213ENST00000556296 IGF1RP08069 1367 aa21.9■■□□□ 1.1
APEX1-213ENST00000556296 CUL7Q14999 1698 aa21.88■■□□□ 1.09
APEX1-213ENST00000556296 FAM69CQ0P6D2 419 aa21.84■■□□□ 1.09
APEX1-213ENST00000556296 KIAA0586Q9BVV6 1533 aa21.84■■□□□ 1.09
APEX1-213ENST00000556296 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.08
APEX1-213ENST00000556296 ABCC10Q5T3U5 1492 aa21.76■■□□□ 1.07
APEX1-213ENST00000556296 PTPRGP23470 1445 aa21.72■■□□□ 1.07
APEX1-213ENST00000556296 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
APEX1-213ENST00000556296 MAPKBP1O60336 1514 aa21.72■■□□□ 1.07
APEX1-213ENST00000556296 KIF13AQ9H1H9 1805 aa21.67■■□□□ 1.06
APEX1-213ENST00000556296 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
APEX1-213ENST00000556296 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
APEX1-213ENST00000556296 ADCY10Q96PN6 1610 aa21.64■■□□□ 1.05
APEX1-213ENST00000556296 IQGAP2Q13576 1575 aa21.6■■□□□ 1.05
APEX1-213ENST00000556296 DIP2BQ9P265 1576 aa21.58■■□□□ 1.05
APEX1-213ENST00000556296 RAPGEF2Q9Y4G8 1499 aa21.57■■□□□ 1.04
APEX1-213ENST00000556296 ABCC2Q92887 1545 aa21.54■■□□□ 1.04
APEX1-213ENST00000556296 PLB1Q6P1J6 1458 aa21.53■■□□□ 1.04
APEX1-213ENST00000556296 UACAQ9BZF9 1416 aa21.52■■□□□ 1.04
APEX1-213ENST00000556296 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
APEX1-213ENST00000556296 UHRF1BP1LA0JNW5 1464 aa21.5■■□□□ 1.03
APEX1-213ENST00000556296 UGGT2Q9NYU1 1516 aa21.49■■□□□ 1.03
APEX1-213ENST00000556296 ASXL2Q76L83 1435 aa21.48■■□□□ 1.03
APEX1-213ENST00000556296 KDM6BO15054 1643 aa21.47■■□□□ 1.03
APEX1-213ENST00000556296 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
APEX1-213ENST00000556296 CTTNBP2Q8WZ74 1663 aa21.43■■□□□ 1.02
APEX1-213ENST00000556296 KIAA0556O60303 1618 aa21.41■■□□□ 1.02
APEX1-213ENST00000556296 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
APEX1-213ENST00000556296 GLI2P10070 1586 aa21.39■■□□□ 1.01
APEX1-213ENST00000556296 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
APEX1-213ENST00000556296 KDM4FA0A1W2PPD8 638 aa21.36■■□□□ 1.01
APEX1-213ENST00000556296 GOLGA3Q08378 1498 aa21.36■■□□□ 1.01
APEX1-213ENST00000556296 TSPOAP1O95153 1857 aa21.35■■□□□ 1.01
APEX1-213ENST00000556296 TEX14Q8IWB6 1497 aa21.34■■□□□ 1.01
APEX1-213ENST00000556296 EPRSP07814 1512 aaKnown RBP21.34■■□□□ 1.01
APEX1-213ENST00000556296 ZCCHC11Q5TAX3 1644 aaKnown RBP21.28■■□□□ 1
APEX1-213ENST00000556296 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
APEX1-213ENST00000556296 WDR7Q9Y4E6 1490 aa21.26■□□□□ 0.99
APEX1-213ENST00000556296 PPRC1Q5VV67 1664 aaKnown RBP21.26■□□□□ 0.99
APEX1-213ENST00000556296 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
APEX1-213ENST00000556296 ABCA8O94911 1581 aa21.23■□□□□ 0.99
APEX1-213ENST00000556296 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
APEX1-213ENST00000556296 CD109Q6YHK3 1445 aa21.2■□□□□ 0.98
APEX1-213ENST00000556296 MAP3K4Q9Y6R4 1608 aa21.19■□□□□ 0.98
APEX1-213ENST00000556296 EEA1Q15075 1411 aa21.18■□□□□ 0.98
APEX1-213ENST00000556296 COL17A1Q9UMD9 1497 aaPredicted RBP21.16■□□□□ 0.98
APEX1-213ENST00000556296 ADGRL1O94910 1474 aa21.14■□□□□ 0.98
APEX1-213ENST00000556296 MAGI3Q5TCQ9 1506 aa21.14■□□□□ 0.97
APEX1-213ENST00000556296 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
APEX1-213ENST00000556296 SAMD9Q5K651 1589 aa21.13■□□□□ 0.97
APEX1-213ENST00000556296 ARID3CA6NKF2 412 aa21.08■□□□□ 0.97
APEX1-213ENST00000556296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.97
APEX1-213ENST00000556296 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.97
APEX1-213ENST00000556296 PHLDB1Q86UU1 1377 aa21.07■□□□□ 0.96
APEX1-213ENST00000556296 CFAP43Q8NDM7 1665 aa21.05■□□□□ 0.96
APEX1-213ENST00000556296 ATP10BO94823 1461 aa21.03■□□□□ 0.96
APEX1-213ENST00000556296 KIF21BO75037 1637 aa21.03■□□□□ 0.96
APEX1-213ENST00000556296 RAPGEF6Q8TEU7 1601 aa21■□□□□ 0.95
APEX1-213ENST00000556296 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
APEX1-213ENST00000556296 ARAP3Q8WWN8 1544 aa20.96■□□□□ 0.95
APEX1-213ENST00000556296 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
APEX1-213ENST00000556296 FHOD3Q2V2M9 1422 aa20.93■□□□□ 0.94
APEX1-213ENST00000556296 NUP153P49790 1475 aaKnown RBP20.92■□□□□ 0.94
APEX1-213ENST00000556296 EFCAB5A4FU69 1503 aa20.92■□□□□ 0.94
APEX1-213ENST00000556296 ABCA9Q8IUA7 1624 aa20.92■□□□□ 0.94
APEX1-213ENST00000556296 NEO1Q92859 1461 aa20.9■□□□□ 0.94
APEX1-213ENST00000556296 RAPGEF3O95398 923 aa20.88■□□□□ 0.93
APEX1-213ENST00000556296 ARID4BQ4LE39 1312 aaPredicted RBP20.85■□□□□ 0.93
APEX1-213ENST00000556296 ILDR1Q86SU0 546 aaPredicted RBP20.85■□□□□ 0.93
APEX1-213ENST00000556296 HECW2Q9P2P5 1572 aa20.83■□□□□ 0.92
APEX1-213ENST00000556296 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
APEX1-213ENST00000556296 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
APEX1-213ENST00000556296 CDK11AQ9UQ88 783 aaPredicted RBP20.76■□□□□ 0.91
APEX1-213ENST00000556296 ATP1B4Q9UN42 357 aaPredicted RBP20.75■□□□□ 0.91
APEX1-213ENST00000556296 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
APEX1-213ENST00000556296 AKNAQ7Z591 1439 aa20.74■□□□□ 0.91
APEX1-213ENST00000556296 FANCAO15360 1455 aa20.73■□□□□ 0.91
APEX1-213ENST00000556296 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
APEX1-213ENST00000556296 PTPRMP28827 1452 aa20.72■□□□□ 0.91
APEX1-213ENST00000556296 CDK13Q14004 1512 aaKnown RBP20.72■□□□□ 0.91
APEX1-213ENST00000556296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.91
APEX1-213ENST00000556296 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
APEX1-213ENST00000556296 POGZQ7Z3K3 1410 aa20.7■□□□□ 0.9
APEX1-213ENST00000556296 FRMPD1Q5SYB0 1578 aa20.7■□□□□ 0.9
APEX1-213ENST00000556296 TTC37Q6PGP7 1564 aa20.68■□□□□ 0.9
APEX1-213ENST00000556296 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
APEX1-213ENST00000556296 HECW1Q76N89 1606 aa20.67■□□□□ 0.9
APEX1-213ENST00000556296 EFCAB2Q5VUJ9 269 aa20.65■□□□□ 0.9
APEX1-213ENST00000556296 RICTORQ6R327 1708 aa20.64■□□□□ 0.9
APEX1-213ENST00000556296 MAGI2Q86UL8 1455 aa20.64■□□□□ 0.89
APEX1-213ENST00000556296 ADAMTSL3P82987 1691 aa20.64■□□□□ 0.89
APEX1-213ENST00000556296 PLCH2O75038 1416 aa20.63■□□□□ 0.89
APEX1-213ENST00000556296 ARHGEF40Q8TER5 1519 aa20.61■□□□□ 0.89
APEX1-213ENST00000556296 LRRIQ1Q96JM4 1722 aa20.61■□□□□ 0.89
APEX1-213ENST00000556296 SCAPERQ9BY12 1400 aa20.61■□□□□ 0.89
APEX1-213ENST00000556296 BCORL1Q5H9F3 1711 aa20.58■□□□□ 0.89
APEX1-213ENST00000556296 CLIP1P30622 1438 aa20.58■□□□□ 0.88
APEX1-213ENST00000556296 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms