RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
SUPT16H-205ENST00000556217 FAM69CQ0P6D2 419 aa27.31■■□□□ 1.96
SUPT16H-205ENST00000556217 NPM1P06748 294 aaKnown RBP eCLIP27.28■■□□□ 1.96
SUPT16H-205ENST00000556217 ABCC10Q5T3U5 1492 aa27.26■■□□□ 1.95
SUPT16H-205ENST00000556217 KDM4FA0A1W2PPD8 638 aa27.2■■□□□ 1.94
SUPT16H-205ENST00000556217 CUL7Q14999 1698 aa27.18■■□□□ 1.94
SUPT16H-205ENST00000556217 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
SUPT16H-205ENST00000556217 MAPKBP1O60336 1514 aa27.16■■□□□ 1.94
SUPT16H-205ENST00000556217 KIAA0586Q9BVV6 1533 aa27.16■■□□□ 1.94
SUPT16H-205ENST00000556217 IGF1RP08069 1367 aa27.14■■□□□ 1.94
SUPT16H-205ENST00000556217 ILDR1Q86SU0 546 aaPredicted RBP27.13■■□□□ 1.93
SUPT16H-205ENST00000556217 DIP2BQ9P265 1576 aa27.12■■□□□ 1.93
SUPT16H-205ENST00000556217 ADCY10Q96PN6 1610 aa27.12■■□□□ 1.93
SUPT16H-205ENST00000556217 KDM6BO15054 1643 aa27.1■■□□□ 1.93
SUPT16H-205ENST00000556217 TSPOAP1O95153 1857 aa27■■□□□ 1.91
SUPT16H-205ENST00000556217 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
SUPT16H-205ENST00000556217 PTPRGP23470 1445 aa26.96■■□□□ 1.91
SUPT16H-205ENST00000556217 CARMIL2Q6F5E8 1435 aa26.94■■□□□ 1.9
SUPT16H-205ENST00000556217 IQGAP2Q13576 1575 aa26.89■■□□□ 1.9
SUPT16H-205ENST00000556217 TNIKQ9UKE5 1360 aa26.89■■□□□ 1.9
SUPT16H-205ENST00000556217 TTBK1Q5TCY1 1321 aaPredicted RBP26.87■■□□□ 1.89
SUPT16H-205ENST00000556217 ABCC2Q92887 1545 aa26.85■■□□□ 1.89
SUPT16H-205ENST00000556217 UHRF1BP1LA0JNW5 1464 aa26.78■■□□□ 1.88
SUPT16H-205ENST00000556217 PLB1Q6P1J6 1458 aa26.78■■□□□ 1.88
SUPT16H-205ENST00000556217 ADGRL1O94910 1474 aa26.77■■□□□ 1.88
SUPT16H-205ENST00000556217 ASXL2Q76L83 1435 aa26.76■■□□□ 1.87
SUPT16H-205ENST00000556217 UACAQ9BZF9 1416 aa26.73■■□□□ 1.87
SUPT16H-205ENST00000556217 GLI2P10070 1586 aa26.73■■□□□ 1.87
SUPT16H-205ENST00000556217 DISP1Q96F81 1524 aa26.73■■□□□ 1.87
SUPT16H-205ENST00000556217 RAPGEF2Q9Y4G8 1499 aa26.73■■□□□ 1.87
SUPT16H-205ENST00000556217 UGGT2Q9NYU1 1516 aa26.7■■□□□ 1.86
SUPT16H-205ENST00000556217 PPRC1Q5VV67 1664 aaKnown RBP26.67■■□□□ 1.86
SUPT16H-205ENST00000556217 KDM5BQ9UGL1 1544 aa26.65■■□□□ 1.86
SUPT16H-205ENST00000556217 KIAA0556O60303 1618 aa26.63■■□□□ 1.85
SUPT16H-205ENST00000556217 HECW2Q9P2P5 1572 aa26.63■■□□□ 1.85
SUPT16H-205ENST00000556217 ZCCHC11Q5TAX3 1644 aaKnown RBP26.61■■□□□ 1.85
SUPT16H-205ENST00000556217 EPRSP07814 1512 aaKnown RBP26.6■■□□□ 1.85
SUPT16H-205ENST00000556217 COL17A1Q9UMD9 1497 aaPredicted RBP26.59■■□□□ 1.85
SUPT16H-205ENST00000556217 MAP3K4Q9Y6R4 1608 aa26.58■■□□□ 1.85
SUPT16H-205ENST00000556217 CTTNBP2Q8WZ74 1663 aa26.57■■□□□ 1.84
SUPT16H-205ENST00000556217 TEX14Q8IWB6 1497 aa26.55■■□□□ 1.84
SUPT16H-205ENST00000556217 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
SUPT16H-205ENST00000556217 WDR7Q9Y4E6 1490 aa26.49■■□□□ 1.83
SUPT16H-205ENST00000556217 ABCA8O94911 1581 aa26.39■■□□□ 1.82
SUPT16H-205ENST00000556217 CFAP43Q8NDM7 1665 aa26.38■■□□□ 1.81
SUPT16H-205ENST00000556217 FBXO41Q8TF61 875 aa26.38■■□□□ 1.81
SUPT16H-205ENST00000556217 PRXQ9BXM0 1461 aa26.37■■□□□ 1.81
SUPT16H-205ENST00000556217 FAM9AQ8IZU1 332 aaPredicted RBP26.35■■□□□ 1.81
SUPT16H-205ENST00000556217 CD109Q6YHK3 1445 aa26.34■■□□□ 1.81
SUPT16H-205ENST00000556217 MAGI3Q5TCQ9 1506 aa26.33■■□□□ 1.81
SUPT16H-205ENST00000556217 KCNH8Q96L42 1107 aa26.32■■□□□ 1.8
SUPT16H-205ENST00000556217 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
SUPT16H-205ENST00000556217 ATP10BO94823 1461 aa26.16■■□□□ 1.78
SUPT16H-205ENST00000556217 KIF21BO75037 1637 aa26.15■■□□□ 1.78
SUPT16H-205ENST00000556217 ARID3CA6NKF2 412 aa26.15■■□□□ 1.78
SUPT16H-205ENST00000556217 ARAP3Q8WWN8 1544 aa26.14■■□□□ 1.78
SUPT16H-205ENST00000556217 SAMD9Q5K651 1589 aa26.13■■□□□ 1.77
SUPT16H-205ENST00000556217 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
SUPT16H-205ENST00000556217 ABCA9Q8IUA7 1624 aa26.1■■□□□ 1.77
SUPT16H-205ENST00000556217 RAPGEF6Q8TEU7 1601 aa26.1■■□□□ 1.77
SUPT16H-205ENST00000556217 PHLDB1Q86UU1 1377 aa26.09■■□□□ 1.77
SUPT16H-205ENST00000556217 PTPRMP28827 1452 aa26.06■■□□□ 1.76
SUPT16H-205ENST00000556217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.03■■□□□ 1.76
SUPT16H-205ENST00000556217 HNRNPUL2Q1KMD3 747 aaKnown RBP26.03■■□□□ 1.76
SUPT16H-205ENST00000556217 EEA1Q15075 1411 aa26.02■■□□□ 1.76
SUPT16H-205ENST00000556217 ADAMTSL3P82987 1691 aa26.02■■□□□ 1.76
SUPT16H-205ENST00000556217 NEO1Q92859 1461 aa26.01■■□□□ 1.75
SUPT16H-205ENST00000556217 NUP153P49790 1475 aaKnown RBP25.96■■□□□ 1.75
SUPT16H-205ENST00000556217 RAPGEF3O95398 923 aa25.93■■□□□ 1.74
SUPT16H-205ENST00000556217 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
SUPT16H-205ENST00000556217 PCF11O94913 1555 aaKnown RBP25.93■■□□□ 1.74
SUPT16H-205ENST00000556217 FHOD3Q2V2M9 1422 aa25.92■■□□□ 1.74
SUPT16H-205ENST00000556217 ARID4BQ4LE39 1312 aaPredicted RBP25.91■■□□□ 1.74
SUPT16H-205ENST00000556217 FRMPD1Q5SYB0 1578 aa25.88■■□□□ 1.73
SUPT16H-205ENST00000556217 LMTK3Q96Q04 1460 aa25.88■■□□□ 1.73
SUPT16H-205ENST00000556217 PLEKHD1A6NEE1 506 aa25.88■■□□□ 1.73
SUPT16H-205ENST00000556217 BCORL1Q5H9F3 1711 aa25.88■■□□□ 1.73
SUPT16H-205ENST00000556217 EFCAB5A4FU69 1503 aa25.86■■□□□ 1.73
SUPT16H-205ENST00000556217 MADDQ8WXG6 1647 aa25.85■■□□□ 1.73
SUPT16H-205ENST00000556217 CFAP74Q9C0B2 1584 aa25.84■■□□□ 1.73
SUPT16H-205ENST00000556217 DENND4BO75064 1496 aaPredicted RBP25.81■■□□□ 1.72
SUPT16H-205ENST00000556217 RICTORQ6R327 1708 aa25.8■■□□□ 1.72
SUPT16H-205ENST00000556217 ARHGEF40Q8TER5 1519 aa25.79■■□□□ 1.72
SUPT16H-205ENST00000556217 AKNAQ7Z591 1439 aa25.79■■□□□ 1.72
SUPT16H-205ENST00000556217 FANCAO15360 1455 aa25.79■■□□□ 1.72
SUPT16H-205ENST00000556217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.78■■□□□ 1.72
SUPT16H-205ENST00000556217 HSPA2P54652 639 aa25.76■■□□□ 1.71
SUPT16H-205ENST00000556217 CERKQ8TCT0 537 aa25.76■■□□□ 1.71
SUPT16H-205ENST00000556217 TTC37Q6PGP7 1564 aa25.74■■□□□ 1.71
SUPT16H-205ENST00000556217 RIMS1Q86UR5 1692 aaKnown RBP25.74■■□□□ 1.71
SUPT16H-205ENST00000556217 ZMYM4Q5VZL5 1548 aa25.7■■□□□ 1.7
SUPT16H-205ENST00000556217 CDK13Q14004 1512 aaKnown RBP25.68■■□□□ 1.7
SUPT16H-205ENST00000556217 PLPPR3Q6T4P5 718 aa25.68■■□□□ 1.7
SUPT16H-205ENST00000556217 POGZQ7Z3K3 1410 aa25.68■■□□□ 1.7
SUPT16H-205ENST00000556217 ZFYVE16Q7Z3T8 1539 aa25.67■■□□□ 1.7
SUPT16H-205ENST00000556217 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
SUPT16H-205ENST00000556217 FMN1Q68DA7 1419 aa25.63■■□□□ 1.69
SUPT16H-205ENST00000556217 HECW1Q76N89 1606 aa25.63■■□□□ 1.69
SUPT16H-205ENST00000556217 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
SUPT16H-205ENST00000556217 PLCH2O75038 1416 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms