RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 RUSC2Q8N2Y8 1516 aa34.09■■■■□ 3.05
SUPT16H-203ENST00000555752 FAM69CQ0P6D2 419 aa34.06■■■■□ 3.04
SUPT16H-203ENST00000555752 ABCC10Q5T3U5 1492 aa34.03■■■■□ 3.04
SUPT16H-203ENST00000555752 ADCY10Q96PN6 1610 aa33.98■■■■□ 3.03
SUPT16H-203ENST00000555752 MAPKBP1O60336 1514 aa33.96■■■■□ 3.03
SUPT16H-203ENST00000555752 NPM1P06748 294 aaKnown RBP eCLIP33.96■■■■□ 3.03
SUPT16H-203ENST00000555752 DIP2BQ9P265 1576 aa33.96■■■■□ 3.03
SUPT16H-203ENST00000555752 KIAA0586Q9BVV6 1533 aa33.81■■■■□ 3
SUPT16H-203ENST00000555752 TSPOAP1O95153 1857 aa33.8■■■■□ 3
SUPT16H-203ENST00000555752 KDM6BO15054 1643 aa33.79■■■■□ 3
SUPT16H-203ENST00000555752 IGF1RP08069 1367 aa33.78■■■■□ 3
SUPT16H-203ENST00000555752 KDM4FA0A1W2PPD8 638 aa33.76■■■□□ 2.99
SUPT16H-203ENST00000555752 CUL7Q14999 1698 aa33.69■■■□□ 2.98
SUPT16H-203ENST00000555752 TTBK1Q5TCY1 1321 aaPredicted RBP33.67■■■□□ 2.98
SUPT16H-203ENST00000555752 KIF27Q86VH2 1401 aa33.67■■■□□ 2.98
SUPT16H-203ENST00000555752 PTPRGP23470 1445 aa33.63■■■□□ 2.97
SUPT16H-203ENST00000555752 CARMIL1Q5VZK9 1371 aa33.52■■■□□ 2.96
SUPT16H-203ENST00000555752 ABCC2Q92887 1545 aa33.52■■■□□ 2.96
SUPT16H-203ENST00000555752 TNIKQ9UKE5 1360 aa33.51■■■□□ 2.96
SUPT16H-203ENST00000555752 PPRC1Q5VV67 1664 aaKnown RBP33.49■■■□□ 2.95
SUPT16H-203ENST00000555752 ASXL2Q76L83 1435 aa33.49■■■□□ 2.95
SUPT16H-203ENST00000555752 CARMIL2Q6F5E8 1435 aa33.47■■■□□ 2.95
SUPT16H-203ENST00000555752 IQGAP2Q13576 1575 aa33.43■■■□□ 2.94
SUPT16H-203ENST00000555752 GLI2P10070 1586 aa33.42■■■□□ 2.94
SUPT16H-203ENST00000555752 PLB1Q6P1J6 1458 aa33.41■■■□□ 2.94
SUPT16H-203ENST00000555752 UHRF1BP1LA0JNW5 1464 aa33.37■■■□□ 2.93
SUPT16H-203ENST00000555752 UACAQ9BZF9 1416 aa33.36■■■□□ 2.93
SUPT16H-203ENST00000555752 DISP1Q96F81 1524 aa33.35■■■□□ 2.93
SUPT16H-203ENST00000555752 ADGRL1O94910 1474 aa33.33■■■□□ 2.93
SUPT16H-203ENST00000555752 COL17A1Q9UMD9 1497 aaPredicted RBP33.33■■■□□ 2.93
SUPT16H-203ENST00000555752 ILDR1Q86SU0 546 aaPredicted RBP33.3■■■□□ 2.92
SUPT16H-203ENST00000555752 EPRSP07814 1512 aaKnown RBP33.28■■■□□ 2.92
SUPT16H-203ENST00000555752 MAP3K4Q9Y6R4 1608 aa33.25■■■□□ 2.91
SUPT16H-203ENST00000555752 KDM5BQ9UGL1 1544 aa33.25■■■□□ 2.91
SUPT16H-203ENST00000555752 ZCCHC11Q5TAX3 1644 aaKnown RBP33.23■■■□□ 2.91
SUPT16H-203ENST00000555752 UGGT2Q9NYU1 1516 aa33.18■■■□□ 2.9
SUPT16H-203ENST00000555752 KIAA0556O60303 1618 aa33.16■■■□□ 2.9
SUPT16H-203ENST00000555752 RAPGEF2Q9Y4G8 1499 aa33.14■■■□□ 2.9
SUPT16H-203ENST00000555752 TEX14Q8IWB6 1497 aa33.13■■■□□ 2.89
SUPT16H-203ENST00000555752 HECW2Q9P2P5 1572 aa33.07■■■□□ 2.88
SUPT16H-203ENST00000555752 WDR7Q9Y4E6 1490 aa33.05■■■□□ 2.88
SUPT16H-203ENST00000555752 KCNH8Q96L42 1107 aa32.93■■■□□ 2.86
SUPT16H-203ENST00000555752 CTTNBP2Q8WZ74 1663 aa32.92■■■□□ 2.86
SUPT16H-203ENST00000555752 CD109Q6YHK3 1445 aa32.92■■■□□ 2.86
SUPT16H-203ENST00000555752 ABCA8O94911 1581 aa32.89■■■□□ 2.86
SUPT16H-203ENST00000555752 MAGI3Q5TCQ9 1506 aa32.88■■■□□ 2.85
SUPT16H-203ENST00000555752 CFAP43Q8NDM7 1665 aa32.88■■■□□ 2.85
SUPT16H-203ENST00000555752 GOLGA3Q08378 1498 aa32.82■■■□□ 2.84
SUPT16H-203ENST00000555752 KIF21BO75037 1637 aa32.79■■■□□ 2.84
SUPT16H-203ENST00000555752 ARID3CA6NKF2 412 aa32.74■■■□□ 2.83
SUPT16H-203ENST00000555752 PRXQ9BXM0 1461 aa32.67■■■□□ 2.82
SUPT16H-203ENST00000555752 P3H3Q8IVL6 736 aa32.65■■■□□ 2.82
SUPT16H-203ENST00000555752 ARAP3Q8WWN8 1544 aa32.65■■■□□ 2.82
SUPT16H-203ENST00000555752 ATP10BO94823 1461 aa32.62■■■□□ 2.81
SUPT16H-203ENST00000555752 ABCA9Q8IUA7 1624 aa32.55■■■□□ 2.8
SUPT16H-203ENST00000555752 RAPGEF3O95398 923 aa32.53■■■□□ 2.8
SUPT16H-203ENST00000555752 ADAMTSL3P82987 1691 aa32.51■■■□□ 2.79
SUPT16H-203ENST00000555752 PTPRMP28827 1452 aa32.51■■■□□ 2.79
SUPT16H-203ENST00000555752 PHLDB1Q86UU1 1377 aa32.45■■■□□ 2.78
SUPT16H-203ENST00000555752 FAM9AQ8IZU1 332 aaPredicted RBP32.44■■■□□ 2.78
SUPT16H-203ENST00000555752 FBXO41Q8TF61 875 aa32.43■■■□□ 2.78
SUPT16H-203ENST00000555752 FRMPD1Q5SYB0 1578 aa32.43■■■□□ 2.78
SUPT16H-203ENST00000555752 SAMD9Q5K651 1589 aa32.42■■■□□ 2.78
SUPT16H-203ENST00000555752 RAPGEF6Q8TEU7 1601 aa32.42■■■□□ 2.78
SUPT16H-203ENST00000555752 NEO1Q92859 1461 aa32.4■■■□□ 2.78
SUPT16H-203ENST00000555752 BCORL1Q5H9F3 1711 aa32.38■■■□□ 2.77
SUPT16H-203ENST00000555752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.38■■■□□ 2.77
SUPT16H-203ENST00000555752 HNRNPUL2Q1KMD3 747 aaKnown RBP32.38■■■□□ 2.77
SUPT16H-203ENST00000555752 MADDQ8WXG6 1647 aa32.37■■■□□ 2.77
SUPT16H-203ENST00000555752 ARID4BQ4LE39 1312 aaPredicted RBP32.35■■■□□ 2.77
SUPT16H-203ENST00000555752 NUP153P49790 1475 aaKnown RBP32.32■■■□□ 2.76
SUPT16H-203ENST00000555752 RANGAP1P46060 587 aaPredicted RBP32.3■■■□□ 2.76
SUPT16H-203ENST00000555752 PCF11O94913 1555 aaKnown RBP32.29■■■□□ 2.76
SUPT16H-203ENST00000555752 CSRNP3Q8WYN3 585 aa32.28■■■□□ 2.76
SUPT16H-203ENST00000555752 LMTK3Q96Q04 1460 aa32.28■■■□□ 2.76
SUPT16H-203ENST00000555752 ARHGEF40Q8TER5 1519 aa32.24■■■□□ 2.75
SUPT16H-203ENST00000555752 FHOD3Q2V2M9 1422 aa32.24■■■□□ 2.75
SUPT16H-203ENST00000555752 RIMS1Q86UR5 1692 aaKnown RBP32.24■■■□□ 2.75
SUPT16H-203ENST00000555752 RICTORQ6R327 1708 aa32.22■■■□□ 2.75
SUPT16H-203ENST00000555752 DENND4BO75064 1496 aaPredicted RBP32.2■■■□□ 2.75
SUPT16H-203ENST00000555752 AKNAQ7Z591 1439 aa32.17■■■□□ 2.74
SUPT16H-203ENST00000555752 PLPPR3Q6T4P5 718 aa32.16■■■□□ 2.74
SUPT16H-203ENST00000555752 PLEKHD1A6NEE1 506 aa32.15■■■□□ 2.74
SUPT16H-203ENST00000555752 FANCAO15360 1455 aa32.15■■■□□ 2.74
SUPT16H-203ENST00000555752 HSPA2P54652 639 aa32.14■■■□□ 2.74
SUPT16H-203ENST00000555752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.14■■■□□ 2.74
SUPT16H-203ENST00000555752 SIGLEC1Q9BZZ2 1709 aa32.14■■■□□ 2.74
SUPT16H-203ENST00000555752 TTC37Q6PGP7 1564 aa32.11■■■□□ 2.73
SUPT16H-203ENST00000555752 YEATS2Q9ULM3 1422 aa32.09■■■□□ 2.73
SUPT16H-203ENST00000555752 CFAP74Q9C0B2 1584 aa32.07■■■□□ 2.72
SUPT16H-203ENST00000555752 ZMYM4Q5VZL5 1548 aa32.05■■■□□ 2.72
SUPT16H-203ENST00000555752 ZFYVE16Q7Z3T8 1539 aa32.05■■■□□ 2.72
SUPT16H-203ENST00000555752 POGZQ7Z3K3 1410 aa32.01■■■□□ 2.72
SUPT16H-203ENST00000555752 MLECQ14165 292 aa32.01■■■□□ 2.71
SUPT16H-203ENST00000555752 EFCAB5A4FU69 1503 aa32■■■□□ 2.71
SUPT16H-203ENST00000555752 CDK13Q14004 1512 aaKnown RBP32■■■□□ 2.71
SUPT16H-203ENST00000555752 HECW1Q76N89 1606 aa31.99■■■□□ 2.71
SUPT16H-203ENST00000555752 FER1L4A9Z1Z3 1794 aa31.94■■■□□ 2.7
SUPT16H-203ENST00000555752 EEA1Q15075 1411 aa31.94■■■□□ 2.7
SUPT16H-203ENST00000555752 MAGI2Q86UL8 1455 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms