RNA–Protein interactions for RNA: ENST00000555619.5

NPC2-207, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPC2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-207ENST00000555619 OSCARQ8IYS5 282 aa41.83■■■■■ 4.29
NPC2-207ENST00000555619 CEP170Q5SW79 1584 aa41.81■■■■■ 4.28
NPC2-207ENST00000555619 RANGAP1P46060 587 aaPredicted RBP41.75■■■■■ 4.27
NPC2-207ENST00000555619 KIAA0586Q9BVV6 1533 aa41.74■■■■■ 4.27
NPC2-207ENST00000555619 JPH4Q96JJ6 628 aa41.61■■■■■ 4.25
NPC2-207ENST00000555619 IQGAP2Q13576 1575 aa41.58■■■■■ 4.25
NPC2-207ENST00000555619 CTTNBP2Q8WZ74 1663 aa41.58■■■■■ 4.25
NPC2-207ENST00000555619 CLASP1Q7Z460 1538 aa41.55■■■■■ 4.24
NPC2-207ENST00000555619 CEP162Q5TB80 1403 aa41.5■■■■■ 4.23
NPC2-207ENST00000555619 CLIP1P30622 1438 aa41.44■■■■■ 4.23
NPC2-207ENST00000555619 P3H3Q8IVL6 736 aa41.43■■■■■ 4.22
NPC2-207ENST00000555619 UGGT2Q9NYU1 1516 aa41.41■■■■■ 4.22
NPC2-207ENST00000555619 PRG4Q92954 1404 aaPredicted RBP41.37■■■■■ 4.21
NPC2-207ENST00000555619 ARHGAP35Q9NRY4 1499 aa41.31■■■■■ 4.2
NPC2-207ENST00000555619 SHROOM2Q13796 1616 aa41.3■■■■■ 4.2
NPC2-207ENST00000555619 DISP1Q96F81 1524 aa41.29■■■■■ 4.2
NPC2-207ENST00000555619 CARMIL2Q6F5E8 1435 aa41.28■■■■■ 4.2
NPC2-207ENST00000555619 EFCAB5A4FU69 1503 aa41.23■■■■■ 4.19
NPC2-207ENST00000555619 SAMD9Q5K651 1589 aa41.21■■■■■ 4.19
NPC2-207ENST00000555619 FHOD3Q2V2M9 1422 aa41.2■■■■■ 4.19
NPC2-207ENST00000555619 TTBK1Q5TCY1 1321 aaPredicted RBP41.19■■■■■ 4.19
NPC2-207ENST00000555619 ERCC6L2Q5T890 1561 aa41.18■■■■■ 4.18
NPC2-207ENST00000555619 KIAA0556O60303 1618 aa41.16■■■■■ 4.18
NPC2-207ENST00000555619 ARAP1Q96P48 1450 aa41.15■■■■■ 4.18
NPC2-207ENST00000555619 PTPRGP23470 1445 aa41.04■■■■■ 4.16
NPC2-207ENST00000555619 ARHGEF11O15085 1522 aa40.99■■■■■ 4.15
NPC2-207ENST00000555619 FMN1Q68DA7 1419 aa40.93■■■■■ 4.14
NPC2-207ENST00000555619 VPS8Q8N3P4 1428 aa40.9■■■■■ 4.14
NPC2-207ENST00000555619 DNAJC5Q9H3Z4 198 aa40.87■■■■■ 4.13
NPC2-207ENST00000555619 ATP1B4Q9UN42 357 aaPredicted RBP40.86■■■■■ 4.13
NPC2-207ENST00000555619 RIMBP3CA6NJZ7 1639 aa40.84■■■■■ 4.13
NPC2-207ENST00000555619 RIMBP3BA6NNM3 1639 aa40.84■■■■■ 4.13
NPC2-207ENST00000555619 RIMBP3Q9UFD9 1639 aa40.84■■■■■ 4.13
NPC2-207ENST00000555619 PLB1Q6P1J6 1458 aa40.8■■■■■ 4.12
NPC2-207ENST00000555619 CYB5RLQ6IPT4 315 aa40.77■■■■■ 4.12
NPC2-207ENST00000555619 CASKIN1Q8WXD9 1431 aa40.75■■■■■ 4.11
NPC2-207ENST00000555619 UACAQ9BZF9 1416 aa40.75■■■■■ 4.11
NPC2-207ENST00000555619 ARID3CA6NKF2 412 aa40.69■■■■■ 4.1
NPC2-207ENST00000555619 ABCA8O94911 1581 aa40.69■■■■■ 4.1
NPC2-207ENST00000555619 PCF11O94913 1555 aaKnown RBP40.67■■■■■ 4.1
NPC2-207ENST00000555619 FYCO1Q9BQS8 1478 aa40.64■■■■■ 4.1
NPC2-207ENST00000555619 RAPGEF6Q8TEU7 1601 aa40.63■■■■■ 4.09
NPC2-207ENST00000555619 NUP153P49790 1475 aaKnown RBP40.58■■■■■ 4.09
NPC2-207ENST00000555619 UHRF1BP1LA0JNW5 1464 aa40.58■■■■■ 4.09
NPC2-207ENST00000555619 APLP2Q06481 763 aa40.56■■■■■ 4.08
NPC2-207ENST00000555619 ABCC2Q92887 1545 aa40.56■■■■■ 4.08
NPC2-207ENST00000555619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.52■■■■■ 4.08
NPC2-207ENST00000555619 HNRNPUL2Q1KMD3 747 aaKnown RBP40.52■■■■■ 4.08
NPC2-207ENST00000555619 HECW1Q76N89 1606 aa40.52■■■■■ 4.08
NPC2-207ENST00000555619 EPRSP07814 1512 aaKnown RBP40.48■■■■■ 4.07
NPC2-207ENST00000555619 ATP10BO94823 1461 aa40.47■■■■■ 4.07
NPC2-207ENST00000555619 ADCY10Q96PN6 1610 aa40.47■■■■■ 4.07
NPC2-207ENST00000555619 NPM1P06748 294 aaKnown RBP eCLIP40.43■■■■■ 4.06
NPC2-207ENST00000555619 CDK13Q14004 1512 aaKnown RBP40.42■■■■■ 4.06
NPC2-207ENST00000555619 CCDC18Q5T9S5 1454 aa40.39■■■■■ 4.06
NPC2-207ENST00000555619 PPARGC1BQ86YN6 1023 aaKnown RBP40.38■■■■■ 4.05
NPC2-207ENST00000555619 KDM5BQ9UGL1 1544 aa40.37■■■■■ 4.05
NPC2-207ENST00000555619 KANK4Q5T7N3 995 aaPredicted RBP40.35■■■■■ 4.05
NPC2-207ENST00000555619 MAP3K1Q13233 1512 aa40.32■■■■■ 4.05
NPC2-207ENST00000555619 CDK11AQ9UQ88 783 aaPredicted RBP40.32■■■■■ 4.05
NPC2-207ENST00000555619 LRRIQ1Q96JM4 1722 aa40.31■■■■■ 4.04
NPC2-207ENST00000555619 TIAM1Q13009 1591 aa40.31■■■■■ 4.04
NPC2-207ENST00000555619 PLEKHD1A6NEE1 506 aa40.29■■■■■ 4.04
NPC2-207ENST00000555619 ZCCHC11Q5TAX3 1644 aaKnown RBP40.24■■■■■ 4.03
NPC2-207ENST00000555619 MTUS2Q5JR59 1369 aa40.23■■■■■ 4.03
NPC2-207ENST00000555619 LRRC9Q6ZRR7 1453 aa40.19■■■■■ 4.03
NPC2-207ENST00000555619 CFAP43Q8NDM7 1665 aa40.18■■■■■ 4.02
NPC2-207ENST00000555619 MAGI3Q5TCQ9 1506 aa40.16■■■■■ 4.02
NPC2-207ENST00000555619 TROQ12816 1431 aaPredicted RBP40.13■■■■■ 4.01
NPC2-207ENST00000555619 ASXL2Q76L83 1435 aa40.13■■■■■ 4.01
NPC2-207ENST00000555619 KCNH8Q96L42 1107 aa40.12■■■■■ 4.01
NPC2-207ENST00000555619 EHBP1L1Q8N3D4 1523 aa40.03■■■■■ 4
NPC2-207ENST00000555619 WDR7Q9Y4E6 1490 aa40.03■■■■■ 4
NPC2-207ENST00000555619 MAPKBP1O60336 1514 aa39.98■■■■□ 3.99
NPC2-207ENST00000555619 NCOA2Q15596 1464 aa39.9■■■■□ 3.98
NPC2-207ENST00000555619 KIF14Q15058 1648 aa39.87■■■■□ 3.97
NPC2-207ENST00000555619 SUPT6HQ7KZ85 1726 aaKnown RBP39.82■■■■□ 3.97
NPC2-207ENST00000555619 PHLDB1Q86UU1 1377 aa39.82■■■■□ 3.96
NPC2-207ENST00000555619 CCNB3Q8WWL7 1395 aa39.81■■■■□ 3.96
NPC2-207ENST00000555619 ABCC10Q5T3U5 1492 aa39.81■■■■□ 3.96
NPC2-207ENST00000555619 FAM69CQ0P6D2 419 aa39.79■■■■□ 3.96
NPC2-207ENST00000555619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.77■■■■□ 3.96
NPC2-207ENST00000555619 GPATCH8Q9UKJ3 1502 aaKnown RBP39.7■■■■□ 3.95
NPC2-207ENST00000555619 TTC37Q6PGP7 1564 aa39.68■■■■□ 3.94
NPC2-207ENST00000555619 MYOM3Q5VTT5 1437 aa39.67■■■■□ 3.94
NPC2-207ENST00000555619 CFDP1Q9UEE9 299 aaPredicted RBP39.66■■■■□ 3.94
NPC2-207ENST00000555619 CD109Q6YHK3 1445 aa39.64■■■■□ 3.94
NPC2-207ENST00000555619 DIP2BQ9P265 1576 aa39.63■■■■□ 3.94
NPC2-207ENST00000555619 GLI2P10070 1586 aa39.63■■■■□ 3.93
NPC2-207ENST00000555619 ABCA9Q8IUA7 1624 aa39.62■■■■□ 3.93
NPC2-207ENST00000555619 PLCH2O75038 1416 aa39.61■■■■□ 3.93
NPC2-207ENST00000555619 TRHP20396 242 aaPredicted RBP39.61■■■■□ 3.93
NPC2-207ENST00000555619 ZNF777Q9ULD5 760 aaPredicted RBP39.59■■■■□ 3.93
NPC2-207ENST00000555619 FGD6Q6ZV73 1430 aa39.57■■■■□ 3.93
NPC2-207ENST00000555619 EFCAB2Q5VUJ9 269 aa39.54■■■■□ 3.92
NPC2-207ENST00000555619 MIA2Q96PC5 1412 aa39.54■■■■□ 3.92
NPC2-207ENST00000555619 ZNF644Q9H582 1327 aaPredicted RBP39.53■■■■□ 3.92
NPC2-207ENST00000555619 FAM50AQ14320 339 aaKnown RBP39.52■■■■□ 3.92
NPC2-207ENST00000555619 ARHGAP5Q13017 1502 aa39.5■■■■□ 3.91
NPC2-207ENST00000555619 RRBP1Q9P2E9 1410 aaKnown RBP39.48■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms