RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 IGF1RP08069 1367 aa23.51■■□□□ 1.35
TUBB3-208ENST00000555576 CUL7Q14999 1698 aa23.51■■□□□ 1.35
TUBB3-208ENST00000555576 KIF27Q86VH2 1401 aa23.48■■□□□ 1.35
TUBB3-208ENST00000555576 KIAA0586Q9BVV6 1533 aa23.48■■□□□ 1.35
TUBB3-208ENST00000555576 ADCY10Q96PN6 1610 aa23.46■■□□□ 1.35
TUBB3-208ENST00000555576 MAPKBP1O60336 1514 aa23.44■■□□□ 1.34
TUBB3-208ENST00000555576 ABCC10Q5T3U5 1492 aa23.41■■□□□ 1.34
TUBB3-208ENST00000555576 DIP2BQ9P265 1576 aa23.38■■□□□ 1.33
TUBB3-208ENST00000555576 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
TUBB3-208ENST00000555576 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
TUBB3-208ENST00000555576 FAM69CQ0P6D2 419 aa23.29■■□□□ 1.32
TUBB3-208ENST00000555576 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
TUBB3-208ENST00000555576 IQGAP2Q13576 1575 aa23.24■■□□□ 1.31
TUBB3-208ENST00000555576 PTPRGP23470 1445 aa23.22■■□□□ 1.31
TUBB3-208ENST00000555576 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
TUBB3-208ENST00000555576 ABCC2Q92887 1545 aa23.18■■□□□ 1.3
TUBB3-208ENST00000555576 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
TUBB3-208ENST00000555576 CARMIL2Q6F5E8 1435 aa23.17■■□□□ 1.3
TUBB3-208ENST00000555576 UHRF1BP1LA0JNW5 1464 aa23.15■■□□□ 1.3
TUBB3-208ENST00000555576 KDM6BO15054 1643 aa23.15■■□□□ 1.3
TUBB3-208ENST00000555576 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
TUBB3-208ENST00000555576 UGGT2Q9NYU1 1516 aa23.13■■□□□ 1.29
TUBB3-208ENST00000555576 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
TUBB3-208ENST00000555576 ASXL2Q76L83 1435 aa23.09■■□□□ 1.29
TUBB3-208ENST00000555576 GLI2P10070 1586 aa23.09■■□□□ 1.29
TUBB3-208ENST00000555576 PPRC1Q5VV67 1664 aaKnown RBP23.09■■□□□ 1.29
TUBB3-208ENST00000555576 UACAQ9BZF9 1416 aa23.08■■□□□ 1.28
TUBB3-208ENST00000555576 KIAA0556O60303 1618 aa23.07■■□□□ 1.28
TUBB3-208ENST00000555576 PLB1Q6P1J6 1458 aa23.06■■□□□ 1.28
TUBB3-208ENST00000555576 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
TUBB3-208ENST00000555576 KDM5BQ9UGL1 1544 aa23.04■■□□□ 1.28
TUBB3-208ENST00000555576 ZCCHC11Q5TAX3 1644 aaKnown RBP22.99■■□□□ 1.27
TUBB3-208ENST00000555576 EPRSP07814 1512 aaKnown RBP22.98■■□□□ 1.27
TUBB3-208ENST00000555576 MAP3K4Q9Y6R4 1608 aa22.97■■□□□ 1.27
TUBB3-208ENST00000555576 CTTNBP2Q8WZ74 1663 aa22.97■■□□□ 1.27
TUBB3-208ENST00000555576 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
TUBB3-208ENST00000555576 PRXQ9BXM0 1461 aa22.91■■□□□ 1.26
TUBB3-208ENST00000555576 COL17A1Q9UMD9 1497 aaPredicted RBP22.91■■□□□ 1.26
TUBB3-208ENST00000555576 ABCA8O94911 1581 aa22.87■■□□□ 1.25
TUBB3-208ENST00000555576 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
TUBB3-208ENST00000555576 GOLGA3Q08378 1498 aa22.85■■□□□ 1.25
TUBB3-208ENST00000555576 TEX14Q8IWB6 1497 aa22.83■■□□□ 1.25
TUBB3-208ENST00000555576 ADGRL1O94910 1474 aa22.77■■□□□ 1.24
TUBB3-208ENST00000555576 CFAP43Q8NDM7 1665 aa22.75■■□□□ 1.23
TUBB3-208ENST00000555576 MAGI3Q5TCQ9 1506 aa22.74■■□□□ 1.23
TUBB3-208ENST00000555576 SAMD9Q5K651 1589 aa22.68■■□□□ 1.22
TUBB3-208ENST00000555576 CD109Q6YHK3 1445 aa22.68■■□□□ 1.22
TUBB3-208ENST00000555576 ATP10BO94823 1461 aa22.63■■□□□ 1.21
TUBB3-208ENST00000555576 KCNH8Q96L42 1107 aa22.6■■□□□ 1.21
TUBB3-208ENST00000555576 ABCA9Q8IUA7 1624 aa22.57■■□□□ 1.2
TUBB3-208ENST00000555576 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
TUBB3-208ENST00000555576 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
TUBB3-208ENST00000555576 ARAP3Q8WWN8 1544 aa22.57■■□□□ 1.2
TUBB3-208ENST00000555576 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
TUBB3-208ENST00000555576 EEA1Q15075 1411 aa22.52■■□□□ 1.2
TUBB3-208ENST00000555576 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
TUBB3-208ENST00000555576 KIF21BO75037 1637 aa22.51■■□□□ 1.19
TUBB3-208ENST00000555576 NUP153P49790 1475 aaKnown RBP22.51■■□□□ 1.19
TUBB3-208ENST00000555576 HECW2Q9P2P5 1572 aa22.5■■□□□ 1.19
TUBB3-208ENST00000555576 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
TUBB3-208ENST00000555576 FRMPD1Q5SYB0 1578 aa22.44■■□□□ 1.18
TUBB3-208ENST00000555576 PHLDB1Q86UU1 1377 aa22.44■■□□□ 1.18
TUBB3-208ENST00000555576 NEO1Q92859 1461 aa22.43■■□□□ 1.18
TUBB3-208ENST00000555576 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
TUBB3-208ENST00000555576 EFCAB5A4FU69 1503 aa22.39■■□□□ 1.17
TUBB3-208ENST00000555576 ADAMTSL3P82987 1691 aa22.36■■□□□ 1.17
TUBB3-208ENST00000555576 RAPGEF3O95398 923 aa22.34■■□□□ 1.17
TUBB3-208ENST00000555576 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.31■■□□□ 1.16
TUBB3-208ENST00000555576 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
TUBB3-208ENST00000555576 ILDR1Q86SU0 546 aaPredicted RBP22.31■■□□□ 1.16
TUBB3-208ENST00000555576 RICTORQ6R327 1708 aa22.31■■□□□ 1.16
TUBB3-208ENST00000555576 TTC37Q6PGP7 1564 aa22.3■■□□□ 1.16
TUBB3-208ENST00000555576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.3■■□□□ 1.16
TUBB3-208ENST00000555576 HNRNPUL2Q1KMD3 747 aaKnown RBP22.3■■□□□ 1.16
TUBB3-208ENST00000555576 ARHGEF40Q8TER5 1519 aa22.3■■□□□ 1.16
TUBB3-208ENST00000555576 BCORL1Q5H9F3 1711 aa22.29■■□□□ 1.16
TUBB3-208ENST00000555576 PTPRMP28827 1452 aa22.28■■□□□ 1.16
TUBB3-208ENST00000555576 CFAP74Q9C0B2 1584 aa22.27■■□□□ 1.16
TUBB3-208ENST00000555576 CDK13Q14004 1512 aaKnown RBP22.26■■□□□ 1.15
TUBB3-208ENST00000555576 FANCAO15360 1455 aa22.25■■□□□ 1.15
TUBB3-208ENST00000555576 AKNAQ7Z591 1439 aa22.24■■□□□ 1.15
TUBB3-208ENST00000555576 DENND4BO75064 1496 aaPredicted RBP22.24■■□□□ 1.15
TUBB3-208ENST00000555576 PLEKHD1A6NEE1 506 aa22.24■■□□□ 1.15
TUBB3-208ENST00000555576 MADDQ8WXG6 1647 aa22.24■■□□□ 1.15
TUBB3-208ENST00000555576 ZMYM4Q5VZL5 1548 aa22.23■■□□□ 1.15
TUBB3-208ENST00000555576 SIGLEC1Q9BZZ2 1709 aa22.2■■□□□ 1.14
TUBB3-208ENST00000555576 ARHGAP35Q9NRY4 1499 aa22.18■■□□□ 1.14
TUBB3-208ENST00000555576 HECW1Q76N89 1606 aa22.16■■□□□ 1.14
TUBB3-208ENST00000555576 ZFYVE16Q7Z3T8 1539 aa22.14■■□□□ 1.13
TUBB3-208ENST00000555576 PLCH2O75038 1416 aa22.14■■□□□ 1.13
TUBB3-208ENST00000555576 FMN1Q68DA7 1419 aa22.14■■□□□ 1.13
TUBB3-208ENST00000555576 YEATS2Q9ULM3 1422 aa22.14■■□□□ 1.13
TUBB3-208ENST00000555576 LMTK3Q96Q04 1460 aa22.13■■□□□ 1.13
TUBB3-208ENST00000555576 RIMS1Q86UR5 1692 aaKnown RBP22.13■■□□□ 1.13
TUBB3-208ENST00000555576 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
TUBB3-208ENST00000555576 MAGI2Q86UL8 1455 aa22.12■■□□□ 1.13
TUBB3-208ENST00000555576 POGZQ7Z3K3 1410 aa22.12■■□□□ 1.13
TUBB3-208ENST00000555576 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
TUBB3-208ENST00000555576 KIF14Q15058 1648 aa22.09■■□□□ 1.13
TUBB3-208ENST00000555576 LRRIQ1Q96JM4 1722 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms