RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
XRCC3-212ENST00000555231 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
XRCC3-212ENST00000555231 NPM1P06748 294 aaKnown RBP eCLIP23.22■■□□□ 1.31
XRCC3-212ENST00000555231 ABCC10Q5T3U5 1492 aa23.21■■□□□ 1.31
XRCC3-212ENST00000555231 ADCY10Q96PN6 1610 aa23.21■■□□□ 1.31
XRCC3-212ENST00000555231 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
XRCC3-212ENST00000555231 IGF1RP08069 1367 aa23.17■■□□□ 1.3
XRCC3-212ENST00000555231 DIP2BQ9P265 1576 aa23.17■■□□□ 1.3
XRCC3-212ENST00000555231 KIAA0586Q9BVV6 1533 aa23.17■■□□□ 1.3
XRCC3-212ENST00000555231 CUL7Q14999 1698 aa23.15■■□□□ 1.3
XRCC3-212ENST00000555231 KIF27Q86VH2 1401 aa23.15■■□□□ 1.3
XRCC3-212ENST00000555231 TSPOAP1O95153 1857 aa23.11■■□□□ 1.29
XRCC3-212ENST00000555231 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
XRCC3-212ENST00000555231 KDM6BO15054 1643 aa23.04■■□□□ 1.28
XRCC3-212ENST00000555231 CARMIL1Q5VZK9 1371 aa23.02■■□□□ 1.28
XRCC3-212ENST00000555231 PTPRGP23470 1445 aa23.02■■□□□ 1.28
XRCC3-212ENST00000555231 CARMIL2Q6F5E8 1435 aa22.95■■□□□ 1.26
XRCC3-212ENST00000555231 TNIKQ9UKE5 1360 aa22.95■■□□□ 1.26
XRCC3-212ENST00000555231 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
XRCC3-212ENST00000555231 KDM4FA0A1W2PPD8 638 aa22.92■■□□□ 1.26
XRCC3-212ENST00000555231 ABCC2Q92887 1545 aa22.92■■□□□ 1.26
XRCC3-212ENST00000555231 ASXL2Q76L83 1435 aa22.88■■□□□ 1.25
XRCC3-212ENST00000555231 PPRC1Q5VV67 1664 aaKnown RBP22.87■■□□□ 1.25
XRCC3-212ENST00000555231 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
XRCC3-212ENST00000555231 PLB1Q6P1J6 1458 aa22.85■■□□□ 1.25
XRCC3-212ENST00000555231 UACAQ9BZF9 1416 aa22.83■■□□□ 1.25
XRCC3-212ENST00000555231 UHRF1BP1LA0JNW5 1464 aa22.83■■□□□ 1.25
XRCC3-212ENST00000555231 GLI2P10070 1586 aa22.83■■□□□ 1.25
XRCC3-212ENST00000555231 RAPGEF2Q9Y4G8 1499 aa22.78■■□□□ 1.24
XRCC3-212ENST00000555231 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
XRCC3-212ENST00000555231 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
XRCC3-212ENST00000555231 KDM5BQ9UGL1 1544 aa22.75■■□□□ 1.23
XRCC3-212ENST00000555231 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
XRCC3-212ENST00000555231 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
XRCC3-212ENST00000555231 MAP3K4Q9Y6R4 1608 aa22.72■■□□□ 1.23
XRCC3-212ENST00000555231 COL17A1Q9UMD9 1497 aaPredicted RBP22.72■■□□□ 1.23
XRCC3-212ENST00000555231 ADGRL1O94910 1474 aa22.67■■□□□ 1.22
XRCC3-212ENST00000555231 CTTNBP2Q8WZ74 1663 aa22.67■■□□□ 1.22
XRCC3-212ENST00000555231 TEX14Q8IWB6 1497 aa22.64■■□□□ 1.21
XRCC3-212ENST00000555231 WDR7Q9Y4E6 1490 aa22.6■■□□□ 1.21
XRCC3-212ENST00000555231 ABCA8O94911 1581 aa22.55■■□□□ 1.2
XRCC3-212ENST00000555231 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
XRCC3-212ENST00000555231 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
XRCC3-212ENST00000555231 CFAP43Q8NDM7 1665 aa22.52■■□□□ 1.2
XRCC3-212ENST00000555231 CD109Q6YHK3 1445 aa22.51■■□□□ 1.19
XRCC3-212ENST00000555231 ILDR1Q86SU0 546 aaPredicted RBP22.48■■□□□ 1.19
XRCC3-212ENST00000555231 PRXQ9BXM0 1461 aa22.47■■□□□ 1.19
XRCC3-212ENST00000555231 MAGI3Q5TCQ9 1506 aa22.47■■□□□ 1.19
XRCC3-212ENST00000555231 HECW2Q9P2P5 1572 aa22.46■■□□□ 1.19
XRCC3-212ENST00000555231 ARID3CA6NKF2 412 aa22.45■■□□□ 1.18
XRCC3-212ENST00000555231 P3H3Q8IVL6 736 aa22.43■■□□□ 1.18
XRCC3-212ENST00000555231 KIF21BO75037 1637 aa22.39■■□□□ 1.18
XRCC3-212ENST00000555231 ATP10BO94823 1461 aa22.36■■□□□ 1.17
XRCC3-212ENST00000555231 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
XRCC3-212ENST00000555231 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
XRCC3-212ENST00000555231 ABCA9Q8IUA7 1624 aa22.29■■□□□ 1.16
XRCC3-212ENST00000555231 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
XRCC3-212ENST00000555231 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
XRCC3-212ENST00000555231 CSRNP3Q8WYN3 585 aa22.26■■□□□ 1.15
XRCC3-212ENST00000555231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.25■■□□□ 1.15
XRCC3-212ENST00000555231 HNRNPUL2Q1KMD3 747 aaKnown RBP22.25■■□□□ 1.15
XRCC3-212ENST00000555231 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
XRCC3-212ENST00000555231 RAPGEF3O95398 923 aa22.22■■□□□ 1.15
XRCC3-212ENST00000555231 PHLDB1Q86UU1 1377 aa22.19■■□□□ 1.14
XRCC3-212ENST00000555231 ADAMTSL3P82987 1691 aa22.18■■□□□ 1.14
XRCC3-212ENST00000555231 NUP153P49790 1475 aaKnown RBP22.17■■□□□ 1.14
XRCC3-212ENST00000555231 NEO1Q92859 1461 aa22.17■■□□□ 1.14
XRCC3-212ENST00000555231 FHOD3Q2V2M9 1422 aa22.16■■□□□ 1.14
XRCC3-212ENST00000555231 FRMPD1Q5SYB0 1578 aa22.16■■□□□ 1.14
XRCC3-212ENST00000555231 PTPRMP28827 1452 aa22.15■■□□□ 1.14
XRCC3-212ENST00000555231 BCORL1Q5H9F3 1711 aa22.12■■□□□ 1.13
XRCC3-212ENST00000555231 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
XRCC3-212ENST00000555231 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
XRCC3-212ENST00000555231 PLEKHD1A6NEE1 506 aa22.07■■□□□ 1.12
XRCC3-212ENST00000555231 EEA1Q15075 1411 aa22.06■■□□□ 1.12
XRCC3-212ENST00000555231 RICTORQ6R327 1708 aa22.06■■□□□ 1.12
XRCC3-212ENST00000555231 DENND4BO75064 1496 aaPredicted RBP22.04■■□□□ 1.12
XRCC3-212ENST00000555231 ARHGEF40Q8TER5 1519 aa22.04■■□□□ 1.12
XRCC3-212ENST00000555231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.03■■□□□ 1.122e-6■■■■■ 51.7
XRCC3-212ENST00000555231 RIMS1Q86UR5 1692 aaKnown RBP22.03■■□□□ 1.12
XRCC3-212ENST00000555231 AKNAQ7Z591 1439 aa22.03■■□□□ 1.12
XRCC3-212ENST00000555231 FANCAO15360 1455 aa22.02■■□□□ 1.12
XRCC3-212ENST00000555231 TTC37Q6PGP7 1564 aa22.01■■□□□ 1.11
XRCC3-212ENST00000555231 CFAP74Q9C0B2 1584 aa22■■□□□ 1.11
XRCC3-212ENST00000555231 EFCAB5A4FU69 1503 aa21.99■■□□□ 1.11
XRCC3-212ENST00000555231 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
XRCC3-212ENST00000555231 FBXO41Q8TF61 875 aa21.98■■□□□ 1.11
XRCC3-212ENST00000555231 CDK13Q14004 1512 aaKnown RBP21.97■■□□□ 1.11
XRCC3-212ENST00000555231 PLPPR3Q6T4P5 718 aa21.97■■□□□ 1.11
XRCC3-212ENST00000555231 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
XRCC3-212ENST00000555231 SIGLEC1Q9BZZ2 1709 aa21.96■■□□□ 1.11
XRCC3-212ENST00000555231 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
XRCC3-212ENST00000555231 YEATS2Q9ULM3 1422 aa21.94■■□□□ 1.1
XRCC3-212ENST00000555231 ZMYM4Q5VZL5 1548 aa21.93■■□□□ 1.1
XRCC3-212ENST00000555231 ZFYVE16Q7Z3T8 1539 aa21.93■■□□□ 1.1
XRCC3-212ENST00000555231 HECW1Q76N89 1606 aa21.91■■□□□ 1.1
XRCC3-212ENST00000555231 HSPA2P54652 639 aa21.89■■□□□ 1.09
XRCC3-212ENST00000555231 MLECQ14165 292 aa21.89■■□□□ 1.09
XRCC3-212ENST00000555231 ATP1B4Q9UN42 357 aaPredicted RBP21.89■■□□□ 1.09
XRCC3-212ENST00000555231 POGZQ7Z3K3 1410 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms