RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
HNRNPC-216ENST00000555137 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
HNRNPC-216ENST00000555137 IGF1RP08069 1367 aa17.1■□□□□ 0.33
HNRNPC-216ENST00000555137 KIAA0586Q9BVV6 1533 aa17.08■□□□□ 0.32
HNRNPC-216ENST00000555137 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
HNRNPC-216ENST00000555137 ABCC10Q5T3U5 1492 aa17.07■□□□□ 0.32
HNRNPC-216ENST00000555137 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
HNRNPC-216ENST00000555137 CUL7Q14999 1698 aa17.06■□□□□ 0.32
HNRNPC-216ENST00000555137 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
HNRNPC-216ENST00000555137 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
HNRNPC-216ENST00000555137 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
HNRNPC-216ENST00000555137 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
HNRNPC-216ENST00000555137 PTPRGP23470 1445 aa16.94■□□□□ 0.3
HNRNPC-216ENST00000555137 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
HNRNPC-216ENST00000555137 TTBK1Q5TCY1 1321 aaPredicted RBP16.92■□□□□ 0.3
HNRNPC-216ENST00000555137 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
HNRNPC-216ENST00000555137 KDM6BO15054 1643 aa16.91■□□□□ 0.3
HNRNPC-216ENST00000555137 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.3
HNRNPC-216ENST00000555137 ABCC2Q92887 1545 aa16.89■□□□□ 0.29
HNRNPC-216ENST00000555137 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
HNRNPC-216ENST00000555137 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
HNRNPC-216ENST00000555137 ASXL2Q76L83 1435 aa16.85■□□□□ 0.29
HNRNPC-216ENST00000555137 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
HNRNPC-216ENST00000555137 PPRC1Q5VV67 1664 aaKnown RBP16.84■□□□□ 0.29
HNRNPC-216ENST00000555137 KDM4FA0A1W2PPD8 638 aa16.82■□□□□ 0.28
HNRNPC-216ENST00000555137 UACAQ9BZF9 1416 aa16.81■□□□□ 0.28
HNRNPC-216ENST00000555137 GLI2P10070 1586 aa16.81■□□□□ 0.28
HNRNPC-216ENST00000555137 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
HNRNPC-216ENST00000555137 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
HNRNPC-216ENST00000555137 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
HNRNPC-216ENST00000555137 KIAA0556O60303 1618 aa16.78■□□□□ 0.28
HNRNPC-216ENST00000555137 KDM5BQ9UGL1 1544 aa16.77■□□□□ 0.28
HNRNPC-216ENST00000555137 ZCCHC11Q5TAX3 1644 aaKnown RBP16.75■□□□□ 0.27
HNRNPC-216ENST00000555137 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
HNRNPC-216ENST00000555137 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
HNRNPC-216ENST00000555137 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
HNRNPC-216ENST00000555137 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
HNRNPC-216ENST00000555137 ADGRL1O94910 1474 aa16.66■□□□□ 0.26
HNRNPC-216ENST00000555137 WDR7Q9Y4E6 1490 aa16.66■□□□□ 0.26
HNRNPC-216ENST00000555137 TEX14Q8IWB6 1497 aa16.64■□□□□ 0.25
HNRNPC-216ENST00000555137 ABCA8O94911 1581 aa16.64■□□□□ 0.25
HNRNPC-216ENST00000555137 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
HNRNPC-216ENST00000555137 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
HNRNPC-216ENST00000555137 CFAP43Q8NDM7 1665 aa16.56■□□□□ 0.24
HNRNPC-216ENST00000555137 MAGI3Q5TCQ9 1506 aa16.55■□□□□ 0.24
HNRNPC-216ENST00000555137 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
HNRNPC-216ENST00000555137 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
HNRNPC-216ENST00000555137 ARID3CA6NKF2 412 aa16.5■□□□□ 0.23
HNRNPC-216ENST00000555137 P3H3Q8IVL6 736 aa16.49■□□□□ 0.23
HNRNPC-216ENST00000555137 ATP10BO94823 1461 aa16.48■□□□□ 0.23
HNRNPC-216ENST00000555137 HECW2Q9P2P5 1572 aa16.48■□□□□ 0.23
HNRNPC-216ENST00000555137 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
HNRNPC-216ENST00000555137 KIF21BO75037 1637 aa16.45■□□□□ 0.22
HNRNPC-216ENST00000555137 ILDR1Q86SU0 546 aaPredicted RBP16.43■□□□□ 0.22
HNRNPC-216ENST00000555137 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
HNRNPC-216ENST00000555137 ABCA9Q8IUA7 1624 aa16.42■□□□□ 0.22
HNRNPC-216ENST00000555137 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
HNRNPC-216ENST00000555137 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
HNRNPC-216ENST00000555137 NUP153P49790 1475 aaKnown RBP16.38■□□□□ 0.21
HNRNPC-216ENST00000555137 FRMPD1Q5SYB0 1578 aa16.35■□□□□ 0.21
HNRNPC-216ENST00000555137 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
HNRNPC-216ENST00000555137 RAPGEF3O95398 923 aa16.34■□□□□ 0.21
HNRNPC-216ENST00000555137 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
HNRNPC-216ENST00000555137 NEO1Q92859 1461 aa16.33■□□□□ 0.2
HNRNPC-216ENST00000555137 PHLDB1Q86UU1 1377 aa16.32■□□□□ 0.2
HNRNPC-216ENST00000555137 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
HNRNPC-216ENST00000555137 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
HNRNPC-216ENST00000555137 EEA1Q15075 1411 aa16.3■□□□□ 0.2
HNRNPC-216ENST00000555137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
HNRNPC-216ENST00000555137 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
HNRNPC-216ENST00000555137 PTPRMP28827 1452 aa16.29■□□□□ 0.2
HNRNPC-216ENST00000555137 BCORL1Q5H9F3 1711 aa16.26■□□□□ 0.19
HNRNPC-216ENST00000555137 TTC37Q6PGP7 1564 aa16.25■□□□□ 0.19
HNRNPC-216ENST00000555137 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.191e-13■■■□□ 15.2
HNRNPC-216ENST00000555137 ARHGEF40Q8TER5 1519 aa16.24■□□□□ 0.19
HNRNPC-216ENST00000555137 MADDQ8WXG6 1647 aa16.24■□□□□ 0.19
HNRNPC-216ENST00000555137 RICTORQ6R327 1708 aa16.24■□□□□ 0.19
HNRNPC-216ENST00000555137 EFCAB5A4FU69 1503 aa16.24■□□□□ 0.19
HNRNPC-216ENST00000555137 CDK13Q14004 1512 aaKnown RBP16.22■□□□□ 0.19
HNRNPC-216ENST00000555137 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
HNRNPC-216ENST00000555137 AKNAQ7Z591 1439 aa16.21■□□□□ 0.19
HNRNPC-216ENST00000555137 PLEKHD1A6NEE1 506 aa16.21■□□□□ 0.19
HNRNPC-216ENST00000555137 FANCAO15360 1455 aa16.21■□□□□ 0.19
HNRNPC-216ENST00000555137 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
HNRNPC-216ENST00000555137 ARID4BQ4LE39 1312 aaPredicted RBP16.19■□□□□ 0.18
HNRNPC-216ENST00000555137 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
HNRNPC-216ENST00000555137 ZMYM4Q5VZL5 1548 aa16.18■□□□□ 0.18
HNRNPC-216ENST00000555137 YEATS2Q9ULM3 1422 aa16.17■□□□□ 0.18
HNRNPC-216ENST00000555137 RIMS1Q86UR5 1692 aaKnown RBP16.17■□□□□ 0.18
HNRNPC-216ENST00000555137 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
HNRNPC-216ENST00000555137 LMTK3Q96Q04 1460 aa16.16■□□□□ 0.18
HNRNPC-216ENST00000555137 ZFYVE16Q7Z3T8 1539 aa16.14■□□□□ 0.17
HNRNPC-216ENST00000555137 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
HNRNPC-216ENST00000555137 HECW1Q76N89 1606 aa16.12■□□□□ 0.17
HNRNPC-216ENST00000555137 ARHGAP35Q9NRY4 1499 aa16.11■□□□□ 0.17
HNRNPC-216ENST00000555137 PLCH2O75038 1416 aa16.11■□□□□ 0.17
HNRNPC-216ENST00000555137 POGZQ7Z3K3 1410 aa16.11■□□□□ 0.17
HNRNPC-216ENST00000555137 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
HNRNPC-216ENST00000555137 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
HNRNPC-216ENST00000555137 KIF14Q15058 1648 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms