RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
SRP54-205ENST00000554803 PRG4Q92954 1404 aaPredicted RBP19.02■□□□□ 0.64
SRP54-205ENST00000554803 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
SRP54-205ENST00000554803 ADCY10Q96PN6 1610 aa18.98■□□□□ 0.63
SRP54-205ENST00000554803 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
SRP54-205ENST00000554803 NPM1P06748 294 aaKnown RBP eCLIP18.95■□□□□ 0.62
SRP54-205ENST00000554803 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
SRP54-205ENST00000554803 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
SRP54-205ENST00000554803 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
SRP54-205ENST00000554803 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
SRP54-205ENST00000554803 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
SRP54-205ENST00000554803 HECW2Q9P2P5 1572 aa18.87■□□□□ 0.61
SRP54-205ENST00000554803 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
SRP54-205ENST00000554803 PPRC1Q5VV67 1664 aaKnown RBP18.83■□□□□ 0.61
SRP54-205ENST00000554803 GLI2P10070 1586 aa18.74■□□□□ 0.59
SRP54-205ENST00000554803 KIAA0586Q9BVV6 1533 aa18.69■□□□□ 0.58
SRP54-205ENST00000554803 CUL7Q14999 1698 aa18.66■□□□□ 0.58
SRP54-205ENST00000554803 ABCC2Q92887 1545 aa18.66■□□□□ 0.58
SRP54-205ENST00000554803 PLB1Q6P1J6 1458 aa18.65■□□□□ 0.58
SRP54-205ENST00000554803 COL17A1Q9UMD9 1497 aaPredicted RBP18.65■□□□□ 0.58
SRP54-205ENST00000554803 ASXL2Q76L83 1435 aa18.65■□□□□ 0.58
SRP54-205ENST00000554803 MAP3K4Q9Y6R4 1608 aa18.64■□□□□ 0.57
SRP54-205ENST00000554803 FBXO41Q8TF61 875 aa18.64■□□□□ 0.57
SRP54-205ENST00000554803 PTPRGP23470 1445 aa18.62■□□□□ 0.57
SRP54-205ENST00000554803 TEX14Q8IWB6 1497 aa18.57■□□□□ 0.56
SRP54-205ENST00000554803 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
SRP54-205ENST00000554803 EPRSP07814 1512 aaKnown RBP18.55■□□□□ 0.56
SRP54-205ENST00000554803 TNIKQ9UKE5 1360 aa18.54■□□□□ 0.56
SRP54-205ENST00000554803 CARMIL2Q6F5E8 1435 aa18.51■□□□□ 0.55
SRP54-205ENST00000554803 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
SRP54-205ENST00000554803 ZCCHC11Q5TAX3 1644 aaKnown RBP18.49■□□□□ 0.55
SRP54-205ENST00000554803 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
SRP54-205ENST00000554803 UACAQ9BZF9 1416 aa18.48■□□□□ 0.55
SRP54-205ENST00000554803 IGF1RP08069 1367 aa18.47■□□□□ 0.55
SRP54-205ENST00000554803 IQGAP2Q13576 1575 aa18.45■□□□□ 0.54
SRP54-205ENST00000554803 KIF21BO75037 1637 aa18.44■□□□□ 0.54
SRP54-205ENST00000554803 CFAP43Q8NDM7 1665 aa18.41■□□□□ 0.54
SRP54-205ENST00000554803 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
SRP54-205ENST00000554803 DISP1Q96F81 1524 aa18.39■□□□□ 0.54
SRP54-205ENST00000554803 LMTK3Q96Q04 1460 aa18.37■□□□□ 0.53
SRP54-205ENST00000554803 MAGI3Q5TCQ9 1506 aa18.37■□□□□ 0.53
SRP54-205ENST00000554803 WDR7Q9Y4E6 1490 aa18.36■□□□□ 0.53
SRP54-205ENST00000554803 ADAMTSL3P82987 1691 aa18.34■□□□□ 0.53
SRP54-205ENST00000554803 CARMIL1Q5VZK9 1371 aa18.33■□□□□ 0.53
SRP54-205ENST00000554803 PTPRMP28827 1452 aa18.32■□□□□ 0.52
SRP54-205ENST00000554803 CD109Q6YHK3 1445 aa18.31■□□□□ 0.52
SRP54-205ENST00000554803 KIAA0556O60303 1618 aa18.3■□□□□ 0.52
SRP54-205ENST00000554803 UGGT2Q9NYU1 1516 aa18.29■□□□□ 0.52
SRP54-205ENST00000554803 PCF11O94913 1555 aaKnown RBP18.28■□□□□ 0.52
SRP54-205ENST00000554803 ARAP3Q8WWN8 1544 aa18.24■□□□□ 0.51
SRP54-205ENST00000554803 BCORL1Q5H9F3 1711 aa18.24■□□□□ 0.51
SRP54-205ENST00000554803 MADDQ8WXG6 1647 aa18.21■□□□□ 0.51
SRP54-205ENST00000554803 SOCS7O14512 581 aa18.18■□□□□ 0.5
SRP54-205ENST00000554803 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
SRP54-205ENST00000554803 ABCA8O94911 1581 aa18.17■□□□□ 0.5
SRP54-205ENST00000554803 ILDR2Q71H61 639 aa18.14■□□□□ 0.49
SRP54-205ENST00000554803 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
SRP54-205ENST00000554803 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
SRP54-205ENST00000554803 DISP3Q9P2K9 1392 aa18.11■□□□□ 0.49
SRP54-205ENST00000554803 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
SRP54-205ENST00000554803 ABCA9Q8IUA7 1624 aa18.1■□□□□ 0.49
SRP54-205ENST00000554803 PHLDB1Q86UU1 1377 aa18.1■□□□□ 0.49
SRP54-205ENST00000554803 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
SRP54-205ENST00000554803 CERKQ8TCT0 537 aa18.1■□□□□ 0.49
SRP54-205ENST00000554803 FRMPD1Q5SYB0 1578 aa18.08■□□□□ 0.48
SRP54-205ENST00000554803 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
SRP54-205ENST00000554803 NEO1Q92859 1461 aa18.03■□□□□ 0.48
SRP54-205ENST00000554803 RAPGEF3O95398 923 aa18.03■□□□□ 0.48
SRP54-205ENST00000554803 HSPA2P54652 639 aa18.03■□□□□ 0.48
SRP54-205ENST00000554803 ARHGEF40Q8TER5 1519 aa18.03■□□□□ 0.48
SRP54-205ENST00000554803 ARID4BQ4LE39 1312 aaPredicted RBP18.02■□□□□ 0.48
SRP54-205ENST00000554803 SPATA31D1Q6ZQQ2 1576 aa18.01■□□□□ 0.47
SRP54-205ENST00000554803 RICTORQ6R327 1708 aa17.99■□□□□ 0.47
SRP54-205ENST00000554803 ATP10BO94823 1461 aa17.96■□□□□ 0.47
SRP54-205ENST00000554803 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.47
SRP54-205ENST00000554803 SIGLEC1Q9BZZ2 1709 aa17.95■□□□□ 0.46
SRP54-205ENST00000554803 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
SRP54-205ENST00000554803 TTC37Q6PGP7 1564 aa17.91■□□□□ 0.46
SRP54-205ENST00000554803 FANCAO15360 1455 aa17.91■□□□□ 0.46
SRP54-205ENST00000554803 STRCQ7RTU9 1775 aa17.91■□□□□ 0.46
SRP54-205ENST00000554803 POGZQ7Z3K3 1410 aa17.9■□□□□ 0.46
SRP54-205ENST00000554803 ARID3CA6NKF2 412 aa17.88■□□□□ 0.45
SRP54-205ENST00000554803 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
SRP54-205ENST00000554803 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
SRP54-205ENST00000554803 FHOD3Q2V2M9 1422 aa17.87■□□□□ 0.45
SRP54-205ENST00000554803 ZMYM4Q5VZL5 1548 aa17.87■□□□□ 0.45
SRP54-205ENST00000554803 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
SRP54-205ENST00000554803 AKNAQ7Z591 1439 aa17.86■□□□□ 0.45
SRP54-205ENST00000554803 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
SRP54-205ENST00000554803 RAPGEF6Q8TEU7 1601 aa17.84■□□□□ 0.45
SRP54-205ENST00000554803 ZFYVE16Q7Z3T8 1539 aa17.84■□□□□ 0.45
SRP54-205ENST00000554803 SETD1BQ9UPS6 1966 aaKnown RBP17.84■□□□□ 0.45
SRP54-205ENST00000554803 YEATS2Q9ULM3 1422 aa17.83■□□□□ 0.45
SRP54-205ENST00000554803 FAM9AQ8IZU1 332 aaPredicted RBP17.82■□□□□ 0.44
SRP54-205ENST00000554803 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
SRP54-205ENST00000554803 MAGI2Q86UL8 1455 aa17.8■□□□□ 0.44
SRP54-205ENST00000554803 ARHGEF12Q9NZN5 1544 aa17.79■□□□□ 0.44
SRP54-205ENST00000554803 HRCP23327 699 aa17.79■□□□□ 0.44
SRP54-205ENST00000554803 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
SRP54-205ENST00000554803 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms