RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 FAM9BQ8IZU0 186 aa8.47□□□□□ -1.05
PCNX1-207ENST00000554691 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
PCNX1-207ENST00000554691 TCERG1O14776 1098 aaKnown RBP8.46□□□□□ -1.05
PCNX1-207ENST00000554691 EIF4G2P78344 907 aaKnown RBP eCLIP8.45□□□□□ -1.06
PCNX1-207ENST00000554691 RB1CC1Q8TDY2 1594 aa8.45□□□□□ -1.06
PCNX1-207ENST00000554691 CANXP27824 592 aaKnown RBP8.44□□□□□ -1.06
PCNX1-207ENST00000554691 PNNQ9H307 717 aaKnown RBP8.44□□□□□ -1.06
PCNX1-207ENST00000554691 TMC1Q8TDI8 760 aa8.44□□□□□ -1.06
PCNX1-207ENST00000554691 IRX6P78412 446 aaPredicted RBP8.44□□□□□ -1.06
PCNX1-207ENST00000554691 GOLGA6L22H0YM25 854 aa8.43□□□□□ -1.06
PCNX1-207ENST00000554691 CEP164Q9UPV0 1460 aa8.43□□□□□ -1.06
PCNX1-207ENST00000554691 ARID4BQ4LE39 1312 aaPredicted RBP8.43□□□□□ -1.06
PCNX1-207ENST00000554691 PTMSP20962 102 aa8.42□□□□□ -1.06
PCNX1-207ENST00000554691 RSF1Q96T23 1441 aaPredicted RBP8.42□□□□□ -1.06
PCNX1-207ENST00000554691 LAS1LQ9Y4W2 734 aaKnown RBP8.41□□□□□ -1.06
PCNX1-207ENST00000554691 HSP90AA2PQ14568 343 aaPredicted RBP8.4□□□□□ -1.06
PCNX1-207ENST00000554691 CNGB1Q14028 1251 aaPredicted RBP8.39□□□□□ -1.07
PCNX1-207ENST00000554691 CDK11BP21127 795 aaKnown RBP8.39□□□□□ -1.07
PCNX1-207ENST00000554691 B4GALNT3Q6L9W6 998 aa8.38□□□□□ -1.07
PCNX1-207ENST00000554691 PKNOX2Q96KN3 472 aa8.38□□□□□ -1.07
PCNX1-207ENST00000554691 GSE1Q14687 1217 aa8.38□□□□□ -1.07
PCNX1-207ENST00000554691 UBE2Q2Q8WVN8 375 aa8.38□□□□□ -1.07
PCNX1-207ENST00000554691 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
PCNX1-207ENST00000554691 VPS8Q8N3P4 1428 aa8.36□□□□□ -1.07
PCNX1-207ENST00000554691 MS4A1P11836 297 aa8.35□□□□□ -1.07
PCNX1-207ENST00000554691 VSIG10Q8N0Z9 540 aa8.35□□□□□ -1.07
PCNX1-207ENST00000554691 CCNB3Q8WWL7 1395 aa8.33□□□□□ -1.08
PCNX1-207ENST00000554691 MSNP26038 577 aaKnown RBP8.33□□□□□ -1.08
PCNX1-207ENST00000554691 MAP7D2Q96T17 732 aa8.33□□□□□ -1.08
PCNX1-207ENST00000554691 FAM43AQ8N2R8 423 aa8.31□□□□□ -1.08
PCNX1-207ENST00000554691 ANO8Q9HCE9 1232 aaPredicted RBP8.31□□□□□ -1.08
PCNX1-207ENST00000554691 GOLGA6L3A6NEY3 463 aa8.3□□□□□ -1.08
PCNX1-207ENST00000554691 MTERF4Q7Z6M4 381 aaKnown RBP8.3□□□□□ -1.08
PCNX1-207ENST00000554691 FBLN2P98095 1184 aa8.29□□□□□ -1.08
PCNX1-207ENST00000554691 NUDCQ9Y266 331 aa8.29□□□□□ -1.08
PCNX1-207ENST00000554691 SETD5Q9C0A6 1442 aa8.29□□□□□ -1.08
PCNX1-207ENST00000554691 PDE3BQ13370 1112 aa8.29□□□□□ -1.08
PCNX1-207ENST00000554691 WDR43Q15061 677 aaKnown RBP eCLIP8.28□□□□□ -1.08
PCNX1-207ENST00000554691 SLC24A1O60721 1099 aa8.28□□□□□ -1.08
PCNX1-207ENST00000554691 ZNF326Q5BKZ1 582 aaKnown RBP8.28□□□□□ -1.08
PCNX1-207ENST00000554691 ZBED9Q6R2W3 1325 aa8.28□□□□□ -1.08
PCNX1-207ENST00000554691 CFAP44Q96MT7 982 aa8.27□□□□□ -1.08
PCNX1-207ENST00000554691 DHX57Q6P158 1386 aaKnown RBP8.27□□□□□ -1.08
PCNX1-207ENST00000554691 PTMAP06454 111 aaKnown RBP8.27□□□□□ -1.09
PCNX1-207ENST00000554691 ARXQ96QS3 562 aa8.27□□□□□ -1.09
PCNX1-207ENST00000554691 RRP9O43818 475 aaKnown RBP8.27□□□□□ -1.09
PCNX1-207ENST00000554691 CHAF1AQ13111 956 aaPredicted RBP8.27□□□□□ -1.09
PCNX1-207ENST00000554691 DNTTIP2Q5QJE6 756 aaKnown RBP8.26□□□□□ -1.09
PCNX1-207ENST00000554691 GBP4Q96PP9 640 aa8.26□□□□□ -1.09
PCNX1-207ENST00000554691 MYH16Q9H6N6 1097 aa8.26□□□□□ -1.09
PCNX1-207ENST00000554691 TPM2P07951 284 aa8.25□□□□□ -1.09
PCNX1-207ENST00000554691 SALL2Q9Y467 1007 aaPredicted RBP8.25□□□□□ -1.09
PCNX1-207ENST00000554691 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
PCNX1-207ENST00000554691 PODXL2Q9NZ53 605 aa8.24□□□□□ -1.09
PCNX1-207ENST00000554691 SCRIBQ14160 1630 aa8.24□□□□□ -1.09
PCNX1-207ENST00000554691 ISY1Q9ULR0 285 aaKnown RBP8.24□□□□□ -1.09
PCNX1-207ENST00000554691 HSCBQ8IWL3 235 aa8.23□□□□□ -1.09
PCNX1-207ENST00000554691 NPM1P06748 294 aaKnown RBP eCLIP8.23□□□□□ -1.09
PCNX1-207ENST00000554691 PDE4AP27815 886 aa8.23□□□□□ -1.09
PCNX1-207ENST00000554691 DDX11L8A8MPP1 907 aa8.23□□□□□ -1.09
PCNX1-207ENST00000554691 CHMP4BQ9H444 224 aaKnown RBP8.22□□□□□ -1.09
PCNX1-207ENST00000554691 BAZ1BQ9UIG0 1483 aaKnown RBP8.22□□□□□ -1.09
PCNX1-207ENST00000554691 SKOR2Q2VWA4 1001 aaPredicted RBP8.22□□□□□ -1.09
PCNX1-207ENST00000554691 FHAD1B1AJZ9 1412 aa8.22□□□□□ -1.09
PCNX1-207ENST00000554691 RCAN3Q9UKA8 241 aa8.21□□□□□ -1.09
PCNX1-207ENST00000554691 PHLDB1Q86UU1 1377 aa8.21□□□□□ -1.09
PCNX1-207ENST00000554691 HIRIP3Q9BW71 556 aaPredicted RBP8.21□□□□□ -1.09
PCNX1-207ENST00000554691 MTUS2Q5JR59 1369 aa8.21□□□□□ -1.1
PCNX1-207ENST00000554691 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.21□□□□□ -1.1
PCNX1-207ENST00000554691 ROCK2O75116 1388 aaKnown RBP8.2□□□□□ -1.1
PCNX1-207ENST00000554691 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
PCNX1-207ENST00000554691 RAB3GAP2Q9H2M9 1393 aa8.19□□□□□ -1.1
PCNX1-207ENST00000554691 KIAA2012Q0VF49 1180 aa8.19□□□□□ -1.1
PCNX1-207ENST00000554691 RALBP1Q15311 655 aa8.19□□□□□ -1.1
PCNX1-207ENST00000554691 FAM161AQ3B820 660 aa8.19□□□□□ -1.1
PCNX1-207ENST00000554691 SIN3AQ96ST3 1273 aa8.19□□□□□ -1.1
PCNX1-207ENST00000554691 CDCA8Q53HL2 280 aa8.18□□□□□ -1.1
PCNX1-207ENST00000554691 HSP90AB1P08238 724 aaKnown RBP8.18□□□□□ -1.1
PCNX1-207ENST00000554691 CENPQQ7L2Z9 268 aaPredicted RBP8.18□□□□□ -1.1
PCNX1-207ENST00000554691 C11orf95C9JLR9 678 aaPredicted RBP8.18□□□□□ -1.1
PCNX1-207ENST00000554691 RGS3P49796 1198 aa8.17□□□□□ -1.1
PCNX1-207ENST00000554691 SLC4A1APQ9BWU0 796 aaKnown RBP8.17□□□□□ -1.1
PCNX1-207ENST00000554691 NFKBIBQ15653 356 aa8.17□□□□□ -1.1
PCNX1-207ENST00000554691 IL27Q8NEV9 243 aa8.17□□□□□ -1.1
PCNX1-207ENST00000554691 MRE11P49959 708 aa8.16□□□□□ -1.1
PCNX1-207ENST00000554691 MAPK8IP3Q9UPT6 1336 aa8.16□□□□□ -1.1
PCNX1-207ENST00000554691 BAZ1AQ9NRL2 1556 aaPredicted RBP8.16□□□□□ -1.1
PCNX1-207ENST00000554691 NRDCO43847 1150 aa8.16□□□□□ -1.1
PCNX1-207ENST00000554691 MSH5O43196 834 aa8.16□□□□□ -1.1
PCNX1-207ENST00000554691 HSPA5P11021 654 aaKnown RBP8.16□□□□□ -1.1
PCNX1-207ENST00000554691 CASC1Q6TDU7 716 aa8.16□□□□□ -1.1
PCNX1-207ENST00000554691 KIF27Q86VH2 1401 aa8.15□□□□□ -1.1
PCNX1-207ENST00000554691 SYAP1Q96A49 352 aaPredicted RBP8.15□□□□□ -1.1
PCNX1-207ENST00000554691 GOLGA6L6A8MZA4 724 aa8.15□□□□□ -1.11
PCNX1-207ENST00000554691 TAF3Q5VWG9 929 aa8.13□□□□□ -1.11
PCNX1-207ENST00000554691 PMFBP1Q8TBY8 1022 aa8.13□□□□□ -1.11
PCNX1-207ENST00000554691 SOGA1O94964 1423 aa8.12□□□□□ -1.11
PCNX1-207ENST00000554691 RRP1P56182 461 aaKnown RBP8.12□□□□□ -1.11
PCNX1-207ENST00000554691 TNNT3P45378 269 aaPredicted RBP8.12□□□□□ -1.11
PCNX1-207ENST00000554691 AAMPQ13685 434 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms