RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
ATXN3-230ENST00000554673 CLCN6P51797 869 aa10.65□□□□□ -0.7
ATXN3-230ENST00000554673 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.7
ATXN3-230ENST00000554673 CREBZFQ9NS37 354 aa10.63□□□□□ -0.71
ATXN3-230ENST00000554673 BAZ1AQ9NRL2 1556 aaPredicted RBP10.63□□□□□ -0.71
ATXN3-230ENST00000554673 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
ATXN3-230ENST00000554673 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
ATXN3-230ENST00000554673 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
ATXN3-230ENST00000554673 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
ATXN3-230ENST00000554673 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
ATXN3-230ENST00000554673 EIF4G1Q04637 1599 aaKnown RBP10.59□□□□□ -0.71
ATXN3-230ENST00000554673 GALR2O43603 387 aaPredicted RBP10.58□□□□□ -0.72
ATXN3-230ENST00000554673 PLSCR2Q9NRY7 297 aa10.58□□□□□ -0.72
ATXN3-230ENST00000554673 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
ATXN3-230ENST00000554673 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-230ENST00000554673 PHF12Q96QT6 1004 aa10.52□□□□□ -0.73
ATXN3-230ENST00000554673 ATAD2BQ9ULI0 1458 aa10.51□□□□□ -0.73
ATXN3-230ENST00000554673 TOP2AP11388 1531 aaKnown RBP10.51□□□□□ -0.73
ATXN3-230ENST00000554673 SMARCA2P51531 1590 aa10.49□□□□□ -0.73
ATXN3-230ENST00000554673 CC2D2AQ9P2K1 1620 aa10.47□□□□□ -0.73
ATXN3-230ENST00000554673 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
ATXN3-230ENST00000554673 OTUD5Q96G74 571 aa10.44□□□□□ -0.74
ATXN3-230ENST00000554673 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
ATXN3-230ENST00000554673 CCDC88BA6NC98 1476 aa10.41□□□□□ -0.74
ATXN3-230ENST00000554673 HMGXB3Q12766 1538 aa10.4□□□□□ -0.74
ATXN3-230ENST00000554673 NCAPD3P42695 1498 aa10.39□□□□□ -0.75
ATXN3-230ENST00000554673 PELP1Q8IZL8 1130 aaKnown RBP10.38□□□□□ -0.75
ATXN3-230ENST00000554673 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-230ENST00000554673 BAZ1BQ9UIG0 1483 aaKnown RBP10.36□□□□□ -0.75
ATXN3-230ENST00000554673 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
ATXN3-230ENST00000554673 POTEMA6NI47 508 aa10.32□□□□□ -0.76
ATXN3-230ENST00000554673 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
ATXN3-230ENST00000554673 TSPYL2Q9H2G4 693 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-230ENST00000554673 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
ATXN3-230ENST00000554673 ATMINO43313 823 aaPredicted RBP10.27□□□□□ -0.77
ATXN3-230ENST00000554673 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
ATXN3-230ENST00000554673 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
ATXN3-230ENST00000554673 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
ATXN3-230ENST00000554673 C7P10643 843 aa10.24□□□□□ -0.77
ATXN3-230ENST00000554673 PRDM2Q13029 1718 aa10.24□□□□□ -0.77
ATXN3-230ENST00000554673 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
ATXN3-230ENST00000554673 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-230ENST00000554673 NESP48681 1621 aa10.19□□□□□ -0.78
ATXN3-230ENST00000554673 MAMSTRQ6ZN01 415 aa10.18□□□□□ -0.78
ATXN3-230ENST00000554673 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
ATXN3-230ENST00000554673 SYNJ1O43426 1573 aa10.18□□□□□ -0.78
ATXN3-230ENST00000554673 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-230ENST00000554673 CFTRP13569 1480 aa10.16□□□□□ -0.78
ATXN3-230ENST00000554673 KIF12Q96FN5 646 aa10.15□□□□□ -0.78
ATXN3-230ENST00000554673 SCUBE2Q9NQ36 999 aa10.15□□□□□ -0.78
ATXN3-230ENST00000554673 TRPC6Q9Y210 931 aa10.15□□□□□ -0.78
ATXN3-230ENST00000554673 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
ATXN3-230ENST00000554673 MIER1Q8N108 512 aa10.13□□□□□ -0.79
ATXN3-230ENST00000554673 BMP2KQ9NSY1 1161 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-230ENST00000554673 MAP3K13O43283 966 aa10.11□□□□□ -0.79
ATXN3-230ENST00000554673 PROM2Q8N271 834 aa10.11□□□□□ -0.79
ATXN3-230ENST00000554673 KIF21AQ7Z4S6 1674 aa10.11□□□□□ -0.79
ATXN3-230ENST00000554673 CUX1P39880 1505 aa10.1□□□□□ -0.79
ATXN3-230ENST00000554673 BIVM-ERCC5R4GMW8 1640 aa10.09□□□□□ -0.79
ATXN3-230ENST00000554673 FKBP8Q14318 412 aa10.09□□□□□ -0.79
ATXN3-230ENST00000554673 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
ATXN3-230ENST00000554673 POTEFA5A3E0 1075 aa10.07□□□□□ -0.8
ATXN3-230ENST00000554673 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-230ENST00000554673 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
ATXN3-230ENST00000554673 CADPSQ9ULU8 1353 aa10.06□□□□□ -0.8
ATXN3-230ENST00000554673 SEC24BO95487 1268 aa10.06□□□□□ -0.8
ATXN3-230ENST00000554673 RUSC2Q8N2Y8 1516 aa10.06□□□□□ -0.8
ATXN3-230ENST00000554673 TIE1P35590 1138 aa10.05□□□□□ -0.8
ATXN3-230ENST00000554673 TOP2BQ02880 1626 aa10.04□□□□□ -0.8
ATXN3-230ENST00000554673 LAMC3Q9Y6N6 1575 aa10.03□□□□□ -0.8
ATXN3-230ENST00000554673 PLCD3Q8N3E9 789 aa10.02□□□□□ -0.81
ATXN3-230ENST00000554673 COLQQ9Y215 455 aaPredicted RBP10.02□□□□□ -0.81
ATXN3-230ENST00000554673 WRNQ14191 1432 aaPredicted RBP eCLIP10.01□□□□□ -0.81
ATXN3-230ENST00000554673 TTLL13PA6NNM8 815 aa10.01□□□□□ -0.81
ATXN3-230ENST00000554673 URB2Q14146 1524 aaKnown RBP10□□□□□ -0.81
ATXN3-230ENST00000554673 FANCD2Q9BXW9 1451 aa9.99□□□□□ -0.81
ATXN3-230ENST00000554673 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
ATXN3-230ENST00000554673 SOGA1O94964 1423 aa9.99□□□□□ -0.81
ATXN3-230ENST00000554673 WDR97A6NE52 1622 aa9.97□□□□□ -0.81
ATXN3-230ENST00000554673 TRIM35Q9UPQ4 493 aa9.97□□□□□ -0.81
ATXN3-230ENST00000554673 THOC2Q8NI27 1593 aaKnown RBP9.94□□□□□ -0.82
ATXN3-230ENST00000554673 DNMBPQ6XZF7 1577 aa9.93□□□□□ -0.82
ATXN3-230ENST00000554673 TOPBP1Q92547 1522 aa9.93□□□□□ -0.82
ATXN3-230ENST00000554673 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
ATXN3-230ENST00000554673 IFNL1Q8IU54 200 aa9.9□□□□□ -0.82
ATXN3-230ENST00000554673 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
ATXN3-230ENST00000554673 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
ATXN3-230ENST00000554673 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
ATXN3-230ENST00000554673 TARBP1Q13395 1621 aaKnown RBP9.89□□□□□ -0.83
ATXN3-230ENST00000554673 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
ATXN3-230ENST00000554673 IER5LQ5T953 404 aa9.89□□□□□ -0.83
ATXN3-230ENST00000554673 TMEM106CQ9BVX2 250 aa9.89□□□□□ -0.83
ATXN3-230ENST00000554673 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
ATXN3-230ENST00000554673 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-230ENST00000554673 RAD54L2Q9Y4B4 1467 aa9.88□□□□□ -0.83
ATXN3-230ENST00000554673 SGIP1Q9BQI5 828 aa9.88□□□□□ -0.83
ATXN3-230ENST00000554673 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
ATXN3-230ENST00000554673 CUX2O14529 1486 aa9.87□□□□□ -0.83
ATXN3-230ENST00000554673 NUBP1P53384 320 aa9.87□□□□□ -0.83
ATXN3-230ENST00000554673 FAM212AQ96EL1 285 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms