RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 NPM1P06748 294 aaKnown RBP eCLIP42.65■■■■■ 4.42
FOXA1-204ENST00000554607 KIF13AQ9H1H9 1805 aa42.62■■■■■ 4.41
FOXA1-204ENST00000554607 IGF1RP08069 1367 aa42.58■■■■■ 4.41
FOXA1-204ENST00000554607 KIF27Q86VH2 1401 aa42.57■■■■■ 4.41
FOXA1-204ENST00000554607 KIAA0586Q9BVV6 1533 aa42.55■■■■■ 4.4
FOXA1-204ENST00000554607 FAM69CQ0P6D2 419 aa42.5■■■■■ 4.39
FOXA1-204ENST00000554607 ABCC10Q5T3U5 1492 aa42.49■■■■■ 4.39
FOXA1-204ENST00000554607 CUL7Q14999 1698 aa42.48■■■■■ 4.39
FOXA1-204ENST00000554607 MAPKBP1O60336 1514 aa42.46■■■■■ 4.39
FOXA1-204ENST00000554607 ADCY10Q96PN6 1610 aa42.4■■■■■ 4.38
FOXA1-204ENST00000554607 DIP2BQ9P265 1576 aa42.31■■■■■ 4.36
FOXA1-204ENST00000554607 CARMIL1Q5VZK9 1371 aa42.3■■■■■ 4.36
FOXA1-204ENST00000554607 PTPRGP23470 1445 aa42.24■■■■■ 4.35
FOXA1-204ENST00000554607 CARMIL2Q6F5E8 1435 aa42.19■■■■■ 4.34
FOXA1-204ENST00000554607 TNIKQ9UKE5 1360 aa42.14■■■■■ 4.34
FOXA1-204ENST00000554607 TTBK1Q5TCY1 1321 aaPredicted RBP42.1■■■■■ 4.33
FOXA1-204ENST00000554607 KDM6BO15054 1643 aa42.06■■■■■ 4.32
FOXA1-204ENST00000554607 IQGAP2Q13576 1575 aa42.05■■■■■ 4.32
FOXA1-204ENST00000554607 ABCC2Q92887 1545 aa42.02■■■■■ 4.32
FOXA1-204ENST00000554607 TSPOAP1O95153 1857 aa42.02■■■■■ 4.32
FOXA1-204ENST00000554607 UHRF1BP1LA0JNW5 1464 aa41.93■■■■■ 4.3
FOXA1-204ENST00000554607 PLB1Q6P1J6 1458 aa41.93■■■■■ 4.3
FOXA1-204ENST00000554607 ASXL2Q76L83 1435 aa41.9■■■■■ 4.3
FOXA1-204ENST00000554607 UACAQ9BZF9 1416 aa41.89■■■■■ 4.3
FOXA1-204ENST00000554607 RAPGEF2Q9Y4G8 1499 aa41.87■■■■■ 4.29
FOXA1-204ENST00000554607 DISP1Q96F81 1524 aa41.86■■■■■ 4.29
FOXA1-204ENST00000554607 GLI2P10070 1586 aa41.84■■■■■ 4.29
FOXA1-204ENST00000554607 KDM4FA0A1W2PPD8 638 aa41.8■■■■■ 4.28
FOXA1-204ENST00000554607 UGGT2Q9NYU1 1516 aa41.79■■■■■ 4.28
FOXA1-204ENST00000554607 KDM5BQ9UGL1 1544 aa41.72■■■■■ 4.27
FOXA1-204ENST00000554607 PPRC1Q5VV67 1664 aaKnown RBP41.68■■■■■ 4.26
FOXA1-204ENST00000554607 KIAA0556O60303 1618 aa41.66■■■■■ 4.26
FOXA1-204ENST00000554607 EPRSP07814 1512 aaKnown RBP41.64■■■■■ 4.26
FOXA1-204ENST00000554607 ZCCHC11Q5TAX3 1644 aaKnown RBP41.58■■■■■ 4.25
FOXA1-204ENST00000554607 TEX14Q8IWB6 1497 aa41.55■■■■■ 4.24
FOXA1-204ENST00000554607 MAP3K4Q9Y6R4 1608 aa41.55■■■■■ 4.24
FOXA1-204ENST00000554607 GOLGA3Q08378 1498 aa41.48■■■■■ 4.23
FOXA1-204ENST00000554607 CTTNBP2Q8WZ74 1663 aa41.46■■■■■ 4.23
FOXA1-204ENST00000554607 COL17A1Q9UMD9 1497 aaPredicted RBP41.46■■■■■ 4.23
FOXA1-204ENST00000554607 WDR7Q9Y4E6 1490 aa41.44■■■■■ 4.22
FOXA1-204ENST00000554607 ADGRL1O94910 1474 aa41.37■■■■■ 4.21
FOXA1-204ENST00000554607 PRXQ9BXM0 1461 aa41.34■■■■■ 4.21
FOXA1-204ENST00000554607 ABCA8O94911 1581 aa41.31■■■■■ 4.2
FOXA1-204ENST00000554607 FAM9AQ8IZU1 332 aaPredicted RBP41.28■■■■■ 4.2
FOXA1-204ENST00000554607 KCNH8Q96L42 1107 aa41.27■■■■■ 4.2
FOXA1-204ENST00000554607 CD109Q6YHK3 1445 aa41.27■■■■■ 4.2
FOXA1-204ENST00000554607 MAGI3Q5TCQ9 1506 aa41.23■■■■■ 4.19
FOXA1-204ENST00000554607 CFAP43Q8NDM7 1665 aa41.21■■■■■ 4.19
FOXA1-204ENST00000554607 P3H3Q8IVL6 736 aa41.05■■■■■ 4.16
FOXA1-204ENST00000554607 CSRNP3Q8WYN3 585 aa41■■■■■ 4.15
FOXA1-204ENST00000554607 ATP10BO94823 1461 aa40.99■■■■■ 4.15
FOXA1-204ENST00000554607 ARID3CA6NKF2 412 aa40.98■■■■■ 4.15
FOXA1-204ENST00000554607 ARAP3Q8WWN8 1544 aa40.93■■■■■ 4.14
FOXA1-204ENST00000554607 PHLDB1Q86UU1 1377 aa40.89■■■■■ 4.14
FOXA1-204ENST00000554607 HECW2Q9P2P5 1572 aa40.88■■■■■ 4.13
FOXA1-204ENST00000554607 SAMD9Q5K651 1589 aa40.87■■■■■ 4.13
FOXA1-204ENST00000554607 ILDR1Q86SU0 546 aaPredicted RBP40.86■■■■■ 4.13
FOXA1-204ENST00000554607 ABCA9Q8IUA7 1624 aa40.82■■■■■ 4.13
FOXA1-204ENST00000554607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.8■■■■■ 4.12
FOXA1-204ENST00000554607 HNRNPUL2Q1KMD3 747 aaKnown RBP40.8■■■■■ 4.12
FOXA1-204ENST00000554607 RAPGEF6Q8TEU7 1601 aa40.8■■■■■ 4.12
FOXA1-204ENST00000554607 KIF21BO75037 1637 aa40.77■■■■■ 4.12
FOXA1-204ENST00000554607 EEA1Q15075 1411 aa40.76■■■■■ 4.12
FOXA1-204ENST00000554607 NEO1Q92859 1461 aa40.71■■■■■ 4.11
FOXA1-204ENST00000554607 RAPGEF3O95398 923 aa40.66■■■■■ 4.1
FOXA1-204ENST00000554607 NUP153P49790 1475 aaKnown RBP40.65■■■■■ 4.1
FOXA1-204ENST00000554607 RANGAP1P46060 587 aaPredicted RBP40.65■■■■■ 4.1
FOXA1-204ENST00000554607 PLEKHD1A6NEE1 506 aa40.6■■■■■ 4.09
FOXA1-204ENST00000554607 FHOD3Q2V2M9 1422 aa40.59■■■■■ 4.09
FOXA1-204ENST00000554607 ADAMTSL3P82987 1691 aa40.5■■■■■ 4.07
FOXA1-204ENST00000554607 PTPRMP28827 1452 aa40.49■■■■■ 4.07
FOXA1-204ENST00000554607 ARID4BQ4LE39 1312 aaPredicted RBP40.46■■■■■ 4.07
FOXA1-204ENST00000554607 FRMPD1Q5SYB0 1578 aa40.46■■■■■ 4.07
FOXA1-204ENST00000554607 EFCAB5A4FU69 1503 aa40.46■■■■■ 4.07
FOXA1-204ENST00000554607 DENND4BO75064 1496 aaPredicted RBP40.42■■■■■ 4.06
FOXA1-204ENST00000554607 AKNAQ7Z591 1439 aa40.4■■■■■ 4.06
FOXA1-204ENST00000554607 BCORL1Q5H9F3 1711 aa40.39■■■■■ 4.06
FOXA1-204ENST00000554607 FANCAO15360 1455 aa40.37■■■■■ 4.05
FOXA1-204ENST00000554607 CFAP74Q9C0B2 1584 aa40.35■■■■■ 4.05
FOXA1-204ENST00000554607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.34■■■■■ 4.05
FOXA1-204ENST00000554607 ARHGEF40Q8TER5 1519 aa40.31■■■■■ 4.04
FOXA1-204ENST00000554607 RICTORQ6R327 1708 aa40.3■■■■■ 4.04
FOXA1-204ENST00000554607 MADDQ8WXG6 1647 aa40.28■■■■■ 4.04
FOXA1-204ENST00000554607 TTC37Q6PGP7 1564 aa40.24■■■■■ 4.03
FOXA1-204ENST00000554607 POGZQ7Z3K3 1410 aa40.21■■■■■ 4.03
FOXA1-204ENST00000554607 UBTFP17480 764 aaKnown RBP40.19■■■■■ 4.02
FOXA1-204ENST00000554607 CDK13Q14004 1512 aaKnown RBP40.19■■■■■ 4.02
FOXA1-204ENST00000554607 ZMYM4Q5VZL5 1548 aa40.19■■■■■ 4.02
FOXA1-204ENST00000554607 MAGI2Q86UL8 1455 aa40.18■■■■■ 4.02
FOXA1-204ENST00000554607 PCF11O94913 1555 aaKnown RBP40.17■■■■■ 4.02
FOXA1-204ENST00000554607 FBXO41Q8TF61 875 aa40.15■■■■■ 4.02
FOXA1-204ENST00000554607 ZFYVE16Q7Z3T8 1539 aa40.15■■■■■ 4.02
FOXA1-204ENST00000554607 PLCH2O75038 1416 aa40.15■■■■■ 4.02
FOXA1-204ENST00000554607 FMN1Q68DA7 1419 aa40.15■■■■■ 4.02
FOXA1-204ENST00000554607 RIMS1Q86UR5 1692 aaKnown RBP40.13■■■■■ 4.01
FOXA1-204ENST00000554607 ATP1B4Q9UN42 357 aaPredicted RBP40.13■■■■■ 4.01
FOXA1-204ENST00000554607 CDK11AQ9UQ88 783 aaPredicted RBP40.11■■■■■ 4.01
FOXA1-204ENST00000554607 LMTK3Q96Q04 1460 aa40.1■■■■■ 4.01
FOXA1-204ENST00000554607 SCAPERQ9BY12 1400 aa40.09■■■■■ 4.01
FOXA1-204ENST00000554607 YEATS2Q9ULM3 1422 aa40.09■■■■■ 4.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms