RNA–Protein interactions for RNA: ENST00000553892.2

RALGAPA1-204, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 5 BASIC

Gene RALGAPA1, Length 6,271 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-204ENST00000553892 DNTTIP2Q5QJE6 756 aaKnown RBP6.64□□□□□ -1.35
RALGAPA1-204ENST00000553892 USP35Q9P2H5 1018 aa6.64□□□□□ -1.35
RALGAPA1-204ENST00000553892 LAS1LQ9Y4W2 734 aaKnown RBP6.64□□□□□ -1.35
RALGAPA1-204ENST00000553892 GOLGA6L22H0YM25 854 aa6.64□□□□□ -1.35
RALGAPA1-204ENST00000553892 MSNP26038 577 aaKnown RBP6.64□□□□□ -1.35
RALGAPA1-204ENST00000553892 CANXP27824 592 aaKnown RBP6.64□□□□□ -1.35
RALGAPA1-204ENST00000553892 ATP1B4Q9UN42 357 aaPredicted RBP6.63□□□□□ -1.35
RALGAPA1-204ENST00000553892 PTMAP06454 111 aaKnown RBP6.62□□□□□ -1.35
RALGAPA1-204ENST00000553892 FANCIQ9NVI1 1328 aa6.61□□□□□ -1.35
RALGAPA1-204ENST00000553892 CHAF1AQ13111 956 aaPredicted RBP6.61□□□□□ -1.35
RALGAPA1-204ENST00000553892 MYO15BQ96JP2 1530 aa6.6□□□□□ -1.35
RALGAPA1-204ENST00000553892 PDE4CQ08493 712 aa6.6□□□□□ -1.35
RALGAPA1-204ENST00000553892 APPP05067 770 aa6.59□□□□□ -1.35
RALGAPA1-204ENST00000553892 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.59□□□□□ -1.35
RALGAPA1-204ENST00000553892 TRIM52Q96A61 297 aa6.58□□□□□ -1.36
RALGAPA1-204ENST00000553892 ARID4BQ4LE39 1312 aaPredicted RBP6.57□□□□□ -1.36
RALGAPA1-204ENST00000553892 IRX6P78412 446 aaPredicted RBP6.57□□□□□ -1.36
RALGAPA1-204ENST00000553892 IPO9Q96P70 1041 aaKnown RBP6.57□□□□□ -1.36
RALGAPA1-204ENST00000553892 SALL2Q9Y467 1007 aaPredicted RBP6.57□□□□□ -1.36
RALGAPA1-204ENST00000553892 CALRP27797 417 aaKnown RBP6.56□□□□□ -1.36
RALGAPA1-204ENST00000553892 TIMELESSQ9UNS1 1208 aa6.56□□□□□ -1.36
RALGAPA1-204ENST00000553892 MAP7D2Q96T17 732 aa6.55□□□□□ -1.36
RALGAPA1-204ENST00000553892 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
RALGAPA1-204ENST00000553892 GSE1Q14687 1217 aa6.54□□□□□ -1.36
RALGAPA1-204ENST00000553892 MTERF4Q7Z6M4 381 aaKnown RBP6.54□□□□□ -1.36
RALGAPA1-204ENST00000553892 GOLGA6L3A6NEY3 463 aa6.53□□□□□ -1.36
RALGAPA1-204ENST00000553892 SCRIBQ14160 1630 aa6.53□□□□□ -1.36
RALGAPA1-204ENST00000553892 EEA1Q15075 1411 aa6.52□□□□□ -1.36
RALGAPA1-204ENST00000553892 RRP9O43818 475 aaKnown RBP6.52□□□□□ -1.37
RALGAPA1-204ENST00000553892 FAM9BQ8IZU0 186 aa6.52□□□□□ -1.37
RALGAPA1-204ENST00000553892 TPM2P07951 284 aa6.52□□□□□ -1.37
RALGAPA1-204ENST00000553892 GOLGA6L6A8MZA4 724 aa6.51□□□□□ -1.37
RALGAPA1-204ENST00000553892 SETQ01105 290 aaPredicted RBP6.51□□□□□ -1.37
RALGAPA1-204ENST00000553892 FAM43AQ8N2R8 423 aa6.51□□□□□ -1.37
RALGAPA1-204ENST00000553892 TAF3Q5VWG9 929 aa6.5□□□□□ -1.37
RALGAPA1-204ENST00000553892 ZNF771Q7L3S4 317 aaPredicted RBP6.49□□□□□ -1.37
RALGAPA1-204ENST00000553892 GOLGA6L1Q8N7Z2 621 aa6.49□□□□□ -1.37
RALGAPA1-204ENST00000553892 KIAA2012Q0VF49 1180 aa6.48□□□□□ -1.37
RALGAPA1-204ENST00000553892 FAM50AQ14320 339 aaKnown RBP6.47□□□□□ -1.37
RALGAPA1-204ENST00000553892 TCERG1O14776 1098 aaKnown RBP6.47□□□□□ -1.37
RALGAPA1-204ENST00000553892 MRS2Q9HD23 443 aa6.47□□□□□ -1.37
RALGAPA1-204ENST00000553892 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.47□□□□□ -1.37
RALGAPA1-204ENST00000553892 ARID3AQ99856 593 aa6.47□□□□□ -1.37
RALGAPA1-204ENST00000553892 TONSLQ96HA7 1378 aa6.46□□□□□ -1.37
RALGAPA1-204ENST00000553892 CCER2I3L3R5 266 aa6.46□□□□□ -1.38
RALGAPA1-204ENST00000553892 TAF7LQ5H9L4 462 aa6.46□□□□□ -1.38
RALGAPA1-204ENST00000553892 PDIA4P13667 645 aaKnown RBP6.45□□□□□ -1.38
RALGAPA1-204ENST00000553892 CCDC66A2RUB6 948 aa6.45□□□□□ -1.38
RALGAPA1-204ENST00000553892 NRDCO43847 1150 aa6.45□□□□□ -1.38
RALGAPA1-204ENST00000553892 BAZ1AQ9NRL2 1556 aaPredicted RBP6.45□□□□□ -1.38
RALGAPA1-204ENST00000553892 CSPP1Q1MSJ5 1256 aa6.45□□□□□ -1.38
RALGAPA1-204ENST00000553892 B4GALNT3Q6L9W6 998 aa6.45□□□□□ -1.38
RALGAPA1-204ENST00000553892 GBP4Q96PP9 640 aa6.45□□□□□ -1.38
RALGAPA1-204ENST00000553892 NOM1Q5C9Z4 860 aaKnown RBP6.44□□□□□ -1.38
RALGAPA1-204ENST00000553892 MYH16Q9H6N6 1097 aa6.44□□□□□ -1.38
RALGAPA1-204ENST00000553892 NPM1P06748 294 aaKnown RBP eCLIP6.43□□□□□ -1.38
RALGAPA1-204ENST00000553892 HSCBQ8IWL3 235 aa6.43□□□□□ -1.38
RALGAPA1-204ENST00000553892 TMC1Q8TDI8 760 aa6.43□□□□□ -1.38
RALGAPA1-204ENST00000553892 ZMYND15Q9H091 742 aa6.43□□□□□ -1.38
RALGAPA1-204ENST00000553892 PABPN1Q86U42 306 aaKnown RBP eCLIP6.43□□□□□ -1.38
RALGAPA1-204ENST00000553892 HSP90AB1P08238 724 aaKnown RBP6.42□□□□□ -1.38
RALGAPA1-204ENST00000553892 SMARCA2P51531 1590 aa6.42□□□□□ -1.38
RALGAPA1-204ENST00000553892 IL27Q8NEV9 243 aa6.42□□□□□ -1.38
RALGAPA1-204ENST00000553892 SLC4A1APQ9BWU0 796 aaKnown RBP6.41□□□□□ -1.38
RALGAPA1-204ENST00000553892 FAM13BQ9NYF5 915 aa6.41□□□□□ -1.38
RALGAPA1-204ENST00000553892 BAZ1BQ9UIG0 1483 aaKnown RBP6.4□□□□□ -1.38
RALGAPA1-204ENST00000553892 DDX11L8A8MPP1 907 aa6.4□□□□□ -1.38
RALGAPA1-204ENST00000553892 TEX35Q5T0J7 233 aa6.4□□□□□ -1.38
RALGAPA1-204ENST00000553892 TSPYL1Q9H0U9 437 aa6.4□□□□□ -1.39
RALGAPA1-204ENST00000553892 ZRSR1Q15695 479 aaKnown RBP6.39□□□□□ -1.39
RALGAPA1-204ENST00000553892 HAP1P54257 671 aaPredicted RBP6.39□□□□□ -1.39
RALGAPA1-204ENST00000553892 CASC1Q6TDU7 716 aa6.39□□□□□ -1.39
RALGAPA1-204ENST00000553892 HOMEZQ8IX15 550 aa6.38□□□□□ -1.39
RALGAPA1-204ENST00000553892 RSF1Q96T23 1441 aaPredicted RBP6.38□□□□□ -1.39
RALGAPA1-204ENST00000553892 SKOR2Q2VWA4 1001 aaPredicted RBP6.38□□□□□ -1.39
RALGAPA1-204ENST00000553892 SYAP1Q96A49 352 aaPredicted RBP6.38□□□□□ -1.39
RALGAPA1-204ENST00000553892 CWC15Q9P013 229 aaKnown RBP6.38□□□□□ -1.39
RALGAPA1-204ENST00000553892 PLCB2Q00722 1185 aa6.37□□□□□ -1.39
RALGAPA1-204ENST00000553892 HTATSF1O43719 755 aaKnown RBP6.37□□□□□ -1.39
RALGAPA1-204ENST00000553892 PLEKHG5O94827 1062 aa6.37□□□□□ -1.39
RALGAPA1-204ENST00000553892 GZF1Q9H116 711 aaPredicted RBP6.37□□□□□ -1.39
RALGAPA1-204ENST00000553892 DRC7Q8IY82 874 aa6.36□□□□□ -1.39
RALGAPA1-204ENST00000553892 PATL2C9JE40 543 aaKnown RBP6.36□□□□□ -1.39
RALGAPA1-204ENST00000553892 ESF1Q9H501 851 aaKnown RBP6.36□□□□□ -1.39
RALGAPA1-204ENST00000553892 GPS2Q13227 327 aa6.36□□□□□ -1.39
RALGAPA1-204ENST00000553892 WDR43Q15061 677 aaKnown RBP eCLIP6.36□□□□□ -1.39
RALGAPA1-204ENST00000553892 CFAP44Q96MT7 982 aa6.36□□□□□ -1.39
RALGAPA1-204ENST00000553892 PDCL3Q9H2J4 239 aa6.35□□□□□ -1.39
RALGAPA1-204ENST00000553892 BBXQ8WY36 941 aaPredicted RBP6.35□□□□□ -1.39
RALGAPA1-204ENST00000553892 HMGB1P09429 215 aaKnown RBP6.35□□□□□ -1.39
RALGAPA1-204ENST00000553892 BRPF3Q9ULD4 1205 aa6.35□□□□□ -1.39
RALGAPA1-204ENST00000553892 RBM10P98175 930 aaKnown RBP6.34□□□□□ -1.39
RALGAPA1-204ENST00000553892 PHF14O94880 888 aa6.33□□□□□ -1.4
RALGAPA1-204ENST00000553892 RGS3P49796 1198 aa6.33□□□□□ -1.4
RALGAPA1-204ENST00000553892 IRX3P78415 501 aaPredicted RBP6.33□□□□□ -1.4
RALGAPA1-204ENST00000553892 MRE11P49959 708 aa6.33□□□□□ -1.4
RALGAPA1-204ENST00000553892 FRAT1Q92837 279 aaPredicted RBP6.33□□□□□ -1.4
RALGAPA1-204ENST00000553892 ABCC8Q09428 1581 aa6.33□□□□□ -1.4
RALGAPA1-204ENST00000553892 MS4A1P11836 297 aa6.32□□□□□ -1.4
RALGAPA1-204ENST00000553892 EIF4G2P78344 907 aaKnown RBP eCLIP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms