RNA–Protein interactions for RNA: ENST00000553654.1

NEMP1-203, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 5

Gene NEMP1, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-203ENST00000553654 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
NEMP1-203ENST00000553654 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
NEMP1-203ENST00000553654 JPH4Q96JJ6 628 aa17.95■□□□□ 0.46
NEMP1-203ENST00000553654 CUL7Q14999 1698 aa17.93■□□□□ 0.46
NEMP1-203ENST00000553654 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
NEMP1-203ENST00000553654 KIAA0586Q9BVV6 1533 aa17.89■□□□□ 0.45
NEMP1-203ENST00000553654 IGF1RP08069 1367 aa17.89■□□□□ 0.45
NEMP1-203ENST00000553654 KIF13AQ9H1H9 1805 aa17.86■□□□□ 0.45
NEMP1-203ENST00000553654 MAPKBP1O60336 1514 aa17.85■□□□□ 0.45
NEMP1-203ENST00000553654 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
NEMP1-203ENST00000553654 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
NEMP1-203ENST00000553654 ABCC10Q5T3U5 1492 aa17.81■□□□□ 0.44
NEMP1-203ENST00000553654 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
NEMP1-203ENST00000553654 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.43
NEMP1-203ENST00000553654 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
NEMP1-203ENST00000553654 FAM69CQ0P6D2 419 aa17.72■□□□□ 0.43
NEMP1-203ENST00000553654 CARMIL2Q6F5E8 1435 aa17.72■□□□□ 0.43
NEMP1-203ENST00000553654 IQGAP2Q13576 1575 aa17.71■□□□□ 0.43
NEMP1-203ENST00000553654 PTPRGP23470 1445 aa17.71■□□□□ 0.43
NEMP1-203ENST00000553654 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
NEMP1-203ENST00000553654 ABCC2Q92887 1545 aa17.66■□□□□ 0.42
NEMP1-203ENST00000553654 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
NEMP1-203ENST00000553654 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
NEMP1-203ENST00000553654 UGGT2Q9NYU1 1516 aa17.62■□□□□ 0.41
NEMP1-203ENST00000553654 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
NEMP1-203ENST00000553654 KDM6BO15054 1643 aa17.61■□□□□ 0.41
NEMP1-203ENST00000553654 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
NEMP1-203ENST00000553654 UACAQ9BZF9 1416 aa17.58■□□□□ 0.41
NEMP1-203ENST00000553654 GLI2P10070 1586 aa17.57■□□□□ 0.4
NEMP1-203ENST00000553654 ASXL2Q76L83 1435 aa17.56■□□□□ 0.4
NEMP1-203ENST00000553654 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
NEMP1-203ENST00000553654 TSPOAP1O95153 1857 aa17.55■□□□□ 0.4
NEMP1-203ENST00000553654 KDM5BQ9UGL1 1544 aa17.54■□□□□ 0.4
NEMP1-203ENST00000553654 TTBK1Q5TCY1 1321 aaPredicted RBP17.51■□□□□ 0.39
NEMP1-203ENST00000553654 CTTNBP2Q8WZ74 1663 aa17.5■□□□□ 0.39
NEMP1-203ENST00000553654 PPRC1Q5VV67 1664 aaKnown RBP17.49■□□□□ 0.39
NEMP1-203ENST00000553654 EPRSP07814 1512 aaKnown RBP17.47■□□□□ 0.39
NEMP1-203ENST00000553654 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
NEMP1-203ENST00000553654 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
NEMP1-203ENST00000553654 MAP3K4Q9Y6R4 1608 aa17.46■□□□□ 0.39
NEMP1-203ENST00000553654 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
NEMP1-203ENST00000553654 TEX14Q8IWB6 1497 aa17.44■□□□□ 0.38
NEMP1-203ENST00000553654 WDR7Q9Y4E6 1490 aa17.42■□□□□ 0.38
NEMP1-203ENST00000553654 FOXD1Q16676 465 aa17.4■□□□□ 0.38
NEMP1-203ENST00000553654 ABCA8O94911 1581 aa17.4■□□□□ 0.38
NEMP1-203ENST00000553654 KDM4FA0A1W2PPD8 638 aa17.38■□□□□ 0.37
NEMP1-203ENST00000553654 COL17A1Q9UMD9 1497 aaPredicted RBP17.34■□□□□ 0.37
NEMP1-203ENST00000553654 CFAP43Q8NDM7 1665 aa17.32■□□□□ 0.36
NEMP1-203ENST00000553654 MAGI3Q5TCQ9 1506 aa17.32■□□□□ 0.36
NEMP1-203ENST00000553654 ADGRL1O94910 1474 aa17.3■□□□□ 0.36
NEMP1-203ENST00000553654 CD109Q6YHK3 1445 aa17.29■□□□□ 0.36
NEMP1-203ENST00000553654 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
NEMP1-203ENST00000553654 EEA1Q15075 1411 aa17.26■□□□□ 0.35
NEMP1-203ENST00000553654 SAMD9Q5K651 1589 aa17.26■□□□□ 0.35
NEMP1-203ENST00000553654 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
NEMP1-203ENST00000553654 ATP10BO94823 1461 aa17.21■□□□□ 0.35
NEMP1-203ENST00000553654 RAPGEF6Q8TEU7 1601 aa17.19■□□□□ 0.34
NEMP1-203ENST00000553654 KCNH8Q96L42 1107 aa17.19■□□□□ 0.34
NEMP1-203ENST00000553654 ARAP3Q8WWN8 1544 aa17.19■□□□□ 0.34
NEMP1-203ENST00000553654 ABCA9Q8IUA7 1624 aa17.18■□□□□ 0.34
NEMP1-203ENST00000553654 PHLDB1Q86UU1 1377 aa17.17■□□□□ 0.34
NEMP1-203ENST00000553654 P3H3Q8IVL6 736 aa17.14■□□□□ 0.33
NEMP1-203ENST00000553654 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
NEMP1-203ENST00000553654 NEO1Q92859 1461 aa17.12■□□□□ 0.33
NEMP1-203ENST00000553654 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
NEMP1-203ENST00000553654 KIF21BO75037 1637 aa17.1■□□□□ 0.33
NEMP1-203ENST00000553654 ARID3CA6NKF2 412 aa17.1■□□□□ 0.33
NEMP1-203ENST00000553654 HECW2Q9P2P5 1572 aa17.07■□□□□ 0.32
NEMP1-203ENST00000553654 FHOD3Q2V2M9 1422 aa17.07■□□□□ 0.32
NEMP1-203ENST00000553654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
NEMP1-203ENST00000553654 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
NEMP1-203ENST00000553654 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.31
NEMP1-203ENST00000553654 CFAP74Q9C0B2 1584 aa17.01■□□□□ 0.31
NEMP1-203ENST00000553654 PLEKHD1A6NEE1 506 aa16.99■□□□□ 0.31
NEMP1-203ENST00000553654 ADAMTSL3P82987 1691 aa16.99■□□□□ 0.31
NEMP1-203ENST00000553654 ARHGEF40Q8TER5 1519 aa16.98■□□□□ 0.31
NEMP1-203ENST00000553654 RAPGEF3O95398 923 aa16.98■□□□□ 0.31
NEMP1-203ENST00000553654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.96■□□□□ 0.31
NEMP1-203ENST00000553654 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
NEMP1-203ENST00000553654 FANCAO15360 1455 aa16.96■□□□□ 0.31
NEMP1-203ENST00000553654 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.31
NEMP1-203ENST00000553654 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
NEMP1-203ENST00000553654 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
NEMP1-203ENST00000553654 BCORL1Q5H9F3 1711 aa16.94■□□□□ 0.3
NEMP1-203ENST00000553654 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
NEMP1-203ENST00000553654 ZMYM4Q5VZL5 1548 aa16.94■□□□□ 0.3
NEMP1-203ENST00000553654 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
NEMP1-203ENST00000553654 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
NEMP1-203ENST00000553654 PTPRMP28827 1452 aa16.93■□□□□ 0.3
NEMP1-203ENST00000553654 ADRA2BP18089 450 aa16.91■□□□□ 0.3
NEMP1-203ENST00000553654 HECW1Q76N89 1606 aa16.91■□□□□ 0.3
NEMP1-203ENST00000553654 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
NEMP1-203ENST00000553654 MAGI2Q86UL8 1455 aa16.89■□□□□ 0.29
NEMP1-203ENST00000553654 ILDR1Q86SU0 546 aaPredicted RBP16.89■□□□□ 0.29
NEMP1-203ENST00000553654 MADDQ8WXG6 1647 aa16.88■□□□□ 0.29
NEMP1-203ENST00000553654 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
NEMP1-203ENST00000553654 PLCH2O75038 1416 aa16.87■□□□□ 0.29
NEMP1-203ENST00000553654 ZFYVE16Q7Z3T8 1539 aa16.86■□□□□ 0.29
NEMP1-203ENST00000553654 ARID4BQ4LE39 1312 aaPredicted RBP16.86■□□□□ 0.29
NEMP1-203ENST00000553654 POGZQ7Z3K3 1410 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms