RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
NEDD1-205ENST00000553609 JPH4Q96JJ6 628 aa25.47■■□□□ 1.67
NEDD1-205ENST00000553609 ABCC10Q5T3U5 1492 aa25.35■■□□□ 1.65
NEDD1-205ENST00000553609 MAPKBP1O60336 1514 aa25.35■■□□□ 1.65
NEDD1-205ENST00000553609 ADCY10Q96PN6 1610 aa25.33■■□□□ 1.65
NEDD1-205ENST00000553609 KIAA0586Q9BVV6 1533 aa25.3■■□□□ 1.64
NEDD1-205ENST00000553609 DIP2BQ9P265 1576 aa25.3■■□□□ 1.64
NEDD1-205ENST00000553609 IGF1RP08069 1367 aa25.3■■□□□ 1.64
NEDD1-205ENST00000553609 FAM69CQ0P6D2 419 aa25.28■■□□□ 1.64
NEDD1-205ENST00000553609 CUL7Q14999 1698 aa25.23■■□□□ 1.63
NEDD1-205ENST00000553609 KIF27Q86VH2 1401 aa25.21■■□□□ 1.63
NEDD1-205ENST00000553609 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
NEDD1-205ENST00000553609 KDM6BO15054 1643 aa25.11■■□□□ 1.61
NEDD1-205ENST00000553609 PTPRGP23470 1445 aa25.08■■□□□ 1.61
NEDD1-205ENST00000553609 CARMIL1Q5VZK9 1371 aa25.07■■□□□ 1.6
NEDD1-205ENST00000553609 ABCC2Q92887 1545 aa25.04■■□□□ 1.6
NEDD1-205ENST00000553609 TSPOAP1O95153 1857 aa25.02■■□□□ 1.6
NEDD1-205ENST00000553609 KDM4FA0A1W2PPD8 638 aa25.02■■□□□ 1.6
NEDD1-205ENST00000553609 TNIKQ9UKE5 1360 aa25.02■■□□□ 1.6
NEDD1-205ENST00000553609 IQGAP2Q13576 1575 aa25■■□□□ 1.59
NEDD1-205ENST00000553609 CARMIL2Q6F5E8 1435 aa24.99■■□□□ 1.59
NEDD1-205ENST00000553609 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
NEDD1-205ENST00000553609 ASXL2Q76L83 1435 aa24.96■■□□□ 1.59
NEDD1-205ENST00000553609 PPRC1Q5VV67 1664 aaKnown RBP24.95■■□□□ 1.58
NEDD1-205ENST00000553609 GLI2P10070 1586 aa24.95■■□□□ 1.58
NEDD1-205ENST00000553609 DISP1Q96F81 1524 aa24.95■■□□□ 1.58
NEDD1-205ENST00000553609 PLB1Q6P1J6 1458 aa24.94■■□□□ 1.58
NEDD1-205ENST00000553609 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
NEDD1-205ENST00000553609 UACAQ9BZF9 1416 aa24.9■■□□□ 1.58
NEDD1-205ENST00000553609 UGGT2Q9NYU1 1516 aa24.86■■□□□ 1.57
NEDD1-205ENST00000553609 KDM5BQ9UGL1 1544 aa24.86■■□□□ 1.57
NEDD1-205ENST00000553609 COL17A1Q9UMD9 1497 aaPredicted RBP24.83■■□□□ 1.56
NEDD1-205ENST00000553609 EPRSP07814 1512 aaKnown RBP24.82■■□□□ 1.56
NEDD1-205ENST00000553609 RAPGEF2Q9Y4G8 1499 aa24.82■■□□□ 1.56
NEDD1-205ENST00000553609 MAP3K4Q9Y6R4 1608 aa24.8■■□□□ 1.56
NEDD1-205ENST00000553609 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
NEDD1-205ENST00000553609 ZCCHC11Q5TAX3 1644 aaKnown RBP24.77■■□□□ 1.56
NEDD1-205ENST00000553609 ADGRL1O94910 1474 aa24.75■■□□□ 1.55
NEDD1-205ENST00000553609 TEX14Q8IWB6 1497 aa24.7■■□□□ 1.54
NEDD1-205ENST00000553609 WDR7Q9Y4E6 1490 aa24.67■■□□□ 1.54
NEDD1-205ENST00000553609 CTTNBP2Q8WZ74 1663 aa24.62■■□□□ 1.53
NEDD1-205ENST00000553609 ABCA8O94911 1581 aa24.61■■□□□ 1.53
NEDD1-205ENST00000553609 GOLGA3Q08378 1498 aa24.57■■□□□ 1.52
NEDD1-205ENST00000553609 MAGI3Q5TCQ9 1506 aa24.56■■□□□ 1.52
NEDD1-205ENST00000553609 PRXQ9BXM0 1461 aa24.55■■□□□ 1.52
NEDD1-205ENST00000553609 CFAP43Q8NDM7 1665 aa24.53■■□□□ 1.52
NEDD1-205ENST00000553609 CD109Q6YHK3 1445 aa24.52■■□□□ 1.52
NEDD1-205ENST00000553609 ILDR1Q86SU0 546 aaPredicted RBP24.51■■□□□ 1.51
NEDD1-205ENST00000553609 HECW2Q9P2P5 1572 aa24.5■■□□□ 1.51
NEDD1-205ENST00000553609 KCNH8Q96L42 1107 aa24.45■■□□□ 1.5
NEDD1-205ENST00000553609 ARAP3Q8WWN8 1544 aa24.39■■□□□ 1.49
NEDD1-205ENST00000553609 ATP10BO94823 1461 aa24.38■■□□□ 1.49
NEDD1-205ENST00000553609 KIF21BO75037 1637 aa24.36■■□□□ 1.49
NEDD1-205ENST00000553609 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
NEDD1-205ENST00000553609 SAMD9Q5K651 1589 aa24.32■■□□□ 1.48
NEDD1-205ENST00000553609 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
NEDD1-205ENST00000553609 P3H3Q8IVL6 736 aa24.3■■□□□ 1.48
NEDD1-205ENST00000553609 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
NEDD1-205ENST00000553609 RAPGEF6Q8TEU7 1601 aa24.24■■□□□ 1.47
NEDD1-205ENST00000553609 ADAMTSL3P82987 1691 aa24.21■■□□□ 1.47
NEDD1-205ENST00000553609 NEO1Q92859 1461 aa24.21■■□□□ 1.47
NEDD1-205ENST00000553609 FRMPD1Q5SYB0 1578 aa24.2■■□□□ 1.47
NEDD1-205ENST00000553609 NUP153P49790 1475 aaKnown RBP24.2■■□□□ 1.47
NEDD1-205ENST00000553609 RAPGEF3O95398 923 aa24.19■■□□□ 1.46
NEDD1-205ENST00000553609 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
NEDD1-205ENST00000553609 PTPRMP28827 1452 aa24.17■■□□□ 1.46
NEDD1-205ENST00000553609 FAM9AQ8IZU1 332 aaPredicted RBP24.16■■□□□ 1.46
NEDD1-205ENST00000553609 FHOD3Q2V2M9 1422 aa24.11■■□□□ 1.45
NEDD1-205ENST00000553609 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
NEDD1-205ENST00000553609 MADDQ8WXG6 1647 aa24.07■■□□□ 1.44
NEDD1-205ENST00000553609 ARHGEF40Q8TER5 1519 aa24.07■■□□□ 1.44
NEDD1-205ENST00000553609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
NEDD1-205ENST00000553609 HNRNPUL2Q1KMD3 747 aaKnown RBP24.06■■□□□ 1.44
NEDD1-205ENST00000553609 EEA1Q15075 1411 aa24.06■■□□□ 1.44
NEDD1-205ENST00000553609 RICTORQ6R327 1708 aa24.04■■□□□ 1.44
NEDD1-205ENST00000553609 DENND4BO75064 1496 aaPredicted RBP24.02■■□□□ 1.44
NEDD1-205ENST00000553609 LMTK3Q96Q04 1460 aa24.01■■□□□ 1.43
NEDD1-205ENST00000553609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.01■■□□□ 1.43
NEDD1-205ENST00000553609 PCF11O94913 1555 aaKnown RBP24.01■■□□□ 1.43
NEDD1-205ENST00000553609 AKNAQ7Z591 1439 aa24.01■■□□□ 1.43
NEDD1-205ENST00000553609 FANCAO15360 1455 aa24■■□□□ 1.43
NEDD1-205ENST00000553609 TTC37Q6PGP7 1564 aa23.99■■□□□ 1.43
NEDD1-205ENST00000553609 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
NEDD1-205ENST00000553609 FBXO41Q8TF61 875 aa23.98■■□□□ 1.43
NEDD1-205ENST00000553609 EFCAB5A4FU69 1503 aa23.98■■□□□ 1.43
NEDD1-205ENST00000553609 ZMYM4Q5VZL5 1548 aa23.98■■□□□ 1.43
NEDD1-205ENST00000553609 PLEKHD1A6NEE1 506 aa23.97■■□□□ 1.43
NEDD1-205ENST00000553609 ARID4BQ4LE39 1312 aaPredicted RBP23.97■■□□□ 1.43
NEDD1-205ENST00000553609 CFAP74Q9C0B2 1584 aa23.96■■□□□ 1.43
NEDD1-205ENST00000553609 SIGLEC1Q9BZZ2 1709 aa23.95■■□□□ 1.42
NEDD1-205ENST00000553609 RIMS1Q86UR5 1692 aaKnown RBP23.94■■□□□ 1.42
NEDD1-205ENST00000553609 YEATS2Q9ULM3 1422 aa23.93■■□□□ 1.42
NEDD1-205ENST00000553609 CDK13Q14004 1512 aaKnown RBP23.91■■□□□ 1.42
NEDD1-205ENST00000553609 ZFYVE16Q7Z3T8 1539 aa23.89■■□□□ 1.42
NEDD1-205ENST00000553609 MAGI2Q86UL8 1455 aa23.87■■□□□ 1.41
NEDD1-205ENST00000553609 HECW1Q76N89 1606 aa23.86■■□□□ 1.41
NEDD1-205ENST00000553609 PLCH2O75038 1416 aa23.84■■□□□ 1.41
NEDD1-205ENST00000553609 POGZQ7Z3K3 1410 aa23.84■■□□□ 1.41
NEDD1-205ENST00000553609 SCAPERQ9BY12 1400 aa23.81■■□□□ 1.4
NEDD1-205ENST00000553609 HSPA2P54652 639 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms