RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 RUSC2Q8N2Y8 1516 aa38.48■■■■□ 3.75
SMARCD1-212ENST00000551966 FAM69CQ0P6D2 419 aa38.42■■■■□ 3.74
SMARCD1-212ENST00000551966 NPM1P06748 294 aaKnown RBP eCLIP38.39■■■■□ 3.74
SMARCD1-212ENST00000551966 IGF1RP08069 1367 aa38.39■■■■□ 3.74
SMARCD1-212ENST00000551966 ABCC10Q5T3U5 1492 aa38.37■■■■□ 3.73
SMARCD1-212ENST00000551966 KIAA0586Q9BVV6 1533 aa38.32■■■■□ 3.72
SMARCD1-212ENST00000551966 MAPKBP1O60336 1514 aa38.3■■■■□ 3.72
SMARCD1-212ENST00000551966 ADCY10Q96PN6 1610 aa38.3■■■■□ 3.72
SMARCD1-212ENST00000551966 KIF27Q86VH2 1401 aa38.24■■■■□ 3.71
SMARCD1-212ENST00000551966 DIP2BQ9P265 1576 aa38.22■■■■□ 3.71
SMARCD1-212ENST00000551966 CUL7Q14999 1698 aa38.15■■■■□ 3.7
SMARCD1-212ENST00000551966 CARMIL1Q5VZK9 1371 aa38.07■■■■□ 3.69
SMARCD1-212ENST00000551966 PTPRGP23470 1445 aa38.07■■■■□ 3.69
SMARCD1-212ENST00000551966 TTBK1Q5TCY1 1321 aaPredicted RBP38.02■■■■□ 3.68
SMARCD1-212ENST00000551966 KDM6BO15054 1643 aa37.98■■■■□ 3.67
SMARCD1-212ENST00000551966 TSPOAP1O95153 1857 aa37.97■■■■□ 3.67
SMARCD1-212ENST00000551966 KDM4FA0A1W2PPD8 638 aa37.96■■■■□ 3.67
SMARCD1-212ENST00000551966 TNIKQ9UKE5 1360 aa37.94■■■■□ 3.66
SMARCD1-212ENST00000551966 CARMIL2Q6F5E8 1435 aa37.91■■■■□ 3.66
SMARCD1-212ENST00000551966 ABCC2Q92887 1545 aa37.87■■■■□ 3.65
SMARCD1-212ENST00000551966 ASXL2Q76L83 1435 aa37.83■■■■□ 3.65
SMARCD1-212ENST00000551966 IQGAP2Q13576 1575 aa37.82■■■■□ 3.65
SMARCD1-212ENST00000551966 UHRF1BP1LA0JNW5 1464 aa37.77■■■■□ 3.64
SMARCD1-212ENST00000551966 PLB1Q6P1J6 1458 aa37.77■■■■□ 3.64
SMARCD1-212ENST00000551966 DISP1Q96F81 1524 aa37.77■■■■□ 3.64
SMARCD1-212ENST00000551966 UACAQ9BZF9 1416 aa37.75■■■■□ 3.63
SMARCD1-212ENST00000551966 GLI2P10070 1586 aa37.73■■■■□ 3.63
SMARCD1-212ENST00000551966 PPRC1Q5VV67 1664 aaKnown RBP37.71■■■■□ 3.63
SMARCD1-212ENST00000551966 RAPGEF2Q9Y4G8 1499 aa37.64■■■■□ 3.62
SMARCD1-212ENST00000551966 KDM5BQ9UGL1 1544 aa37.62■■■■□ 3.61
SMARCD1-212ENST00000551966 UGGT2Q9NYU1 1516 aa37.61■■■■□ 3.61
SMARCD1-212ENST00000551966 COL17A1Q9UMD9 1497 aaPredicted RBP37.59■■■■□ 3.61
SMARCD1-212ENST00000551966 EPRSP07814 1512 aaKnown RBP37.58■■■■□ 3.61
SMARCD1-212ENST00000551966 KIAA0556O60303 1618 aa37.5■■■■□ 3.59
SMARCD1-212ENST00000551966 ZCCHC11Q5TAX3 1644 aaKnown RBP37.5■■■■□ 3.59
SMARCD1-212ENST00000551966 MAP3K4Q9Y6R4 1608 aa37.5■■■■□ 3.59
SMARCD1-212ENST00000551966 ADGRL1O94910 1474 aa37.43■■■■□ 3.58
SMARCD1-212ENST00000551966 TEX14Q8IWB6 1497 aa37.38■■■■□ 3.57
SMARCD1-212ENST00000551966 WDR7Q9Y4E6 1490 aa37.34■■■■□ 3.57
SMARCD1-212ENST00000551966 CTTNBP2Q8WZ74 1663 aa37.26■■■■□ 3.56
SMARCD1-212ENST00000551966 KCNH8Q96L42 1107 aa37.25■■■■□ 3.55
SMARCD1-212ENST00000551966 ABCA8O94911 1581 aa37.23■■■■□ 3.55
SMARCD1-212ENST00000551966 GOLGA3Q08378 1498 aa37.23■■■■□ 3.55
SMARCD1-212ENST00000551966 CD109Q6YHK3 1445 aa37.2■■■■□ 3.55
SMARCD1-212ENST00000551966 ILDR1Q86SU0 546 aaPredicted RBP37.2■■■■□ 3.55
SMARCD1-212ENST00000551966 PRXQ9BXM0 1461 aa37.18■■■■□ 3.54
SMARCD1-212ENST00000551966 MAGI3Q5TCQ9 1506 aa37.17■■■■□ 3.54
SMARCD1-212ENST00000551966 CFAP43Q8NDM7 1665 aa37.11■■■■□ 3.53
SMARCD1-212ENST00000551966 P3H3Q8IVL6 736 aa37.03■■■■□ 3.52
SMARCD1-212ENST00000551966 HECW2Q9P2P5 1572 aa37.03■■■■□ 3.52
SMARCD1-212ENST00000551966 ARID3CA6NKF2 412 aa37.01■■■■□ 3.52
SMARCD1-212ENST00000551966 ATP10BO94823 1461 aa36.98■■■■□ 3.51
SMARCD1-212ENST00000551966 ARAP3Q8WWN8 1544 aa36.9■■■■□ 3.5
SMARCD1-212ENST00000551966 FAM9AQ8IZU1 332 aaPredicted RBP36.89■■■■□ 3.5
SMARCD1-212ENST00000551966 KIF21BO75037 1637 aa36.85■■■■□ 3.49
SMARCD1-212ENST00000551966 CSRNP3Q8WYN3 585 aa36.83■■■■□ 3.49
SMARCD1-212ENST00000551966 ABCA9Q8IUA7 1624 aa36.78■■■■□ 3.48
SMARCD1-212ENST00000551966 SAMD9Q5K651 1589 aa36.77■■■■□ 3.48
SMARCD1-212ENST00000551966 RAPGEF3O95398 923 aa36.76■■■■□ 3.48
SMARCD1-212ENST00000551966 PHLDB1Q86UU1 1377 aa36.76■■■■□ 3.47
SMARCD1-212ENST00000551966 RAPGEF6Q8TEU7 1601 aa36.7■■■■□ 3.47
SMARCD1-212ENST00000551966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.7■■■■□ 3.47
SMARCD1-212ENST00000551966 HNRNPUL2Q1KMD3 747 aaKnown RBP36.7■■■■□ 3.47
SMARCD1-212ENST00000551966 NEO1Q92859 1461 aa36.65■■■■□ 3.46
SMARCD1-212ENST00000551966 RANGAP1P46060 587 aaPredicted RBP36.63■■■■□ 3.45
SMARCD1-212ENST00000551966 NUP153P49790 1475 aaKnown RBP36.62■■■■□ 3.45
SMARCD1-212ENST00000551966 ADAMTSL3P82987 1691 aa36.61■■■■□ 3.45
SMARCD1-212ENST00000551966 PTPRMP28827 1452 aa36.6■■■■□ 3.45
SMARCD1-212ENST00000551966 FRMPD1Q5SYB0 1578 aa36.56■■■■□ 3.44
SMARCD1-212ENST00000551966 FHOD3Q2V2M9 1422 aa36.55■■■■□ 3.44
SMARCD1-212ENST00000551966 PLEKHD1A6NEE1 506 aa36.51■■■■□ 3.44
SMARCD1-212ENST00000551966 ARID4BQ4LE39 1312 aaPredicted RBP36.49■■■■□ 3.43
SMARCD1-212ENST00000551966 BCORL1Q5H9F3 1711 aa36.47■■■■□ 3.43
SMARCD1-212ENST00000551966 EEA1Q15075 1411 aa36.46■■■■□ 3.43
SMARCD1-212ENST00000551966 AKNAQ7Z591 1439 aa36.42■■■■□ 3.42
SMARCD1-212ENST00000551966 DENND4BO75064 1496 aaPredicted RBP36.41■■■■□ 3.42
SMARCD1-212ENST00000551966 MADDQ8WXG6 1647 aa36.4■■■■□ 3.42
SMARCD1-212ENST00000551966 FBXO41Q8TF61 875 aa36.38■■■■□ 3.41
SMARCD1-212ENST00000551966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.37■■■■□ 3.41
SMARCD1-212ENST00000551966 RICTORQ6R327 1708 aa36.35■■■■□ 3.41
SMARCD1-212ENST00000551966 FANCAO15360 1455 aa36.35■■■■□ 3.41
SMARCD1-212ENST00000551966 ARHGEF40Q8TER5 1519 aa36.32■■■■□ 3.4
SMARCD1-212ENST00000551966 LMTK3Q96Q04 1460 aa36.29■■■■□ 3.4
SMARCD1-212ENST00000551966 PCF11O94913 1555 aaKnown RBP36.28■■■■□ 3.4
SMARCD1-212ENST00000551966 TTC37Q6PGP7 1564 aa36.27■■■■□ 3.4
SMARCD1-212ENST00000551966 EFCAB5A4FU69 1503 aa36.26■■■■□ 3.4
SMARCD1-212ENST00000551966 RIMS1Q86UR5 1692 aaKnown RBP36.25■■■■□ 3.39
SMARCD1-212ENST00000551966 YEATS2Q9ULM3 1422 aa36.23■■■■□ 3.39
SMARCD1-212ENST00000551966 CDK13Q14004 1512 aaKnown RBP36.23■■■■□ 3.39
SMARCD1-212ENST00000551966 CFAP74Q9C0B2 1584 aa36.23■■■■□ 3.39
SMARCD1-212ENST00000551966 SIGLEC1Q9BZZ2 1709 aa36.2■■■■□ 3.39
SMARCD1-212ENST00000551966 ZMYM4Q5VZL5 1548 aa36.2■■■■□ 3.39
SMARCD1-212ENST00000551966 PLPPR3Q6T4P5 718 aa36.17■■■■□ 3.38
SMARCD1-212ENST00000551966 HSPA2P54652 639 aa36.16■■■■□ 3.38
SMARCD1-212ENST00000551966 ZFYVE16Q7Z3T8 1539 aa36.16■■■■□ 3.38
SMARCD1-212ENST00000551966 PLCH2O75038 1416 aa36.16■■■■□ 3.38
SMARCD1-212ENST00000551966 POGZQ7Z3K3 1410 aa36.15■■■■□ 3.38
SMARCD1-212ENST00000551966 SCAPERQ9BY12 1400 aa36.15■■■■□ 3.38
SMARCD1-212ENST00000551966 MAGI2Q86UL8 1455 aa36.14■■■■□ 3.38
SMARCD1-212ENST00000551966 HECW1Q76N89 1606 aa36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms