RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
SNRPF-203ENST00000551316 ADCY10Q96PN6 1610 aa25.86■■□□□ 1.73
SNRPF-203ENST00000551316 ADGRL1O94910 1474 aa25.85■■□□□ 1.73
SNRPF-203ENST00000551316 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
SNRPF-203ENST00000551316 PPRC1Q5VV67 1664 aaKnown RBP25.75■■□□□ 1.71
SNRPF-203ENST00000551316 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
SNRPF-203ENST00000551316 FHAD1B1AJZ9 1412 aa25.63■■□□□ 1.69
SNRPF-203ENST00000551316 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
SNRPF-203ENST00000551316 ERICH3Q5RHP9 1530 aa25.52■■□□□ 1.68
SNRPF-203ENST00000551316 FBXO41Q8TF61 875 aa25.51■■□□□ 1.67
SNRPF-203ENST00000551316 JPH4Q96JJ6 628 aa25.51■■□□□ 1.67
SNRPF-203ENST00000551316 NPM1P06748 294 aaKnown RBP eCLIP25.48■■□□□ 1.67
SNRPF-203ENST00000551316 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.67
SNRPF-203ENST00000551316 WRNQ14191 1432 aaPredicted RBP eCLIP25.41■■□□□ 1.66
SNRPF-203ENST00000551316 GLI2P10070 1586 aa25.39■■□□□ 1.66
SNRPF-203ENST00000551316 CUL7Q14999 1698 aa25.38■■□□□ 1.65
SNRPF-203ENST00000551316 TOP2BQ02880 1626 aa25.37■■□□□ 1.65
SNRPF-203ENST00000551316 MAP3K4Q9Y6R4 1608 aa25.34■■□□□ 1.65
SNRPF-203ENST00000551316 LMTK3Q96Q04 1460 aa25.32■■□□□ 1.64
SNRPF-203ENST00000551316 ASXL2Q76L83 1435 aa25.29■■□□□ 1.64
SNRPF-203ENST00000551316 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
SNRPF-203ENST00000551316 KIF21BO75037 1637 aa25.23■■□□□ 1.63
SNRPF-203ENST00000551316 PLB1Q6P1J6 1458 aa25.19■■□□□ 1.62
SNRPF-203ENST00000551316 EPRSP07814 1512 aaKnown RBP25.17■■□□□ 1.62
SNRPF-203ENST00000551316 KIAA0586Q9BVV6 1533 aa25.17■■□□□ 1.62
SNRPF-203ENST00000551316 ILDR2Q71H61 639 aa25.15■■□□□ 1.62
SNRPF-203ENST00000551316 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
SNRPF-203ENST00000551316 PTPRGP23470 1445 aa25.11■■□□□ 1.61
SNRPF-203ENST00000551316 TEX14Q8IWB6 1497 aa25.09■■□□□ 1.61
SNRPF-203ENST00000551316 ZCCHC11Q5TAX3 1644 aaKnown RBP25.09■■□□□ 1.61
SNRPF-203ENST00000551316 UHRF1BP1LA0JNW5 1464 aa25.04■■□□□ 1.6
SNRPF-203ENST00000551316 ADAMTSL3P82987 1691 aa25.01■■□□□ 1.59
SNRPF-203ENST00000551316 SOCS7O14512 581 aa25■■□□□ 1.59
SNRPF-203ENST00000551316 KDM5BQ9UGL1 1544 aa24.99■■□□□ 1.59
SNRPF-203ENST00000551316 PCF11O94913 1555 aaKnown RBP24.98■■□□□ 1.59
SNRPF-203ENST00000551316 TNIKQ9UKE5 1360 aa24.98■■□□□ 1.59
SNRPF-203ENST00000551316 PTPRMP28827 1452 aa24.97■■□□□ 1.59
SNRPF-203ENST00000551316 UACAQ9BZF9 1416 aa24.94■■□□□ 1.58
SNRPF-203ENST00000551316 DISP3Q9P2K9 1392 aa24.91■■□□□ 1.58
SNRPF-203ENST00000551316 CFAP43Q8NDM7 1665 aa24.9■■□□□ 1.58
SNRPF-203ENST00000551316 DISP1Q96F81 1524 aa24.89■■□□□ 1.57
SNRPF-203ENST00000551316 MADDQ8WXG6 1647 aa24.89■■□□□ 1.57
SNRPF-203ENST00000551316 IQGAP2Q13576 1575 aa24.88■■□□□ 1.57
SNRPF-203ENST00000551316 WDR7Q9Y4E6 1490 aa24.85■■□□□ 1.57
SNRPF-203ENST00000551316 MAGI3Q5TCQ9 1506 aa24.84■■□□□ 1.57
SNRPF-203ENST00000551316 CARMIL2Q6F5E8 1435 aa24.84■■□□□ 1.57
SNRPF-203ENST00000551316 SPATA31D1Q6ZQQ2 1576 aa24.84■■□□□ 1.57
SNRPF-203ENST00000551316 BCORL1Q5H9F3 1711 aa24.83■■□□□ 1.57
SNRPF-203ENST00000551316 IGF1RP08069 1367 aa24.83■■□□□ 1.57
SNRPF-203ENST00000551316 RIMS1Q86UR5 1692 aaKnown RBP24.77■■□□□ 1.56
SNRPF-203ENST00000551316 CD109Q6YHK3 1445 aa24.75■■□□□ 1.55
SNRPF-203ENST00000551316 KIAA0556O60303 1618 aa24.75■■□□□ 1.55
SNRPF-203ENST00000551316 CERKQ8TCT0 537 aa24.7■■□□□ 1.54
SNRPF-203ENST00000551316 HSPA2P54652 639 aa24.69■■□□□ 1.54
SNRPF-203ENST00000551316 FRMPD1Q5SYB0 1578 aa24.68■■□□□ 1.54
SNRPF-203ENST00000551316 ARAP3Q8WWN8 1544 aa24.68■■□□□ 1.54
SNRPF-203ENST00000551316 UGGT2Q9NYU1 1516 aa24.65■■□□□ 1.54
SNRPF-203ENST00000551316 KIF27Q86VH2 1401 aa24.63■■□□□ 1.53
SNRPF-203ENST00000551316 SIGLEC1Q9BZZ2 1709 aa24.61■■□□□ 1.53
SNRPF-203ENST00000551316 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
SNRPF-203ENST00000551316 ABCA8O94911 1581 aa24.57■■□□□ 1.52
SNRPF-203ENST00000551316 KCNH8Q96L42 1107 aa24.55■■□□□ 1.52
SNRPF-203ENST00000551316 ARHGEF40Q8TER5 1519 aa24.52■■□□□ 1.52
SNRPF-203ENST00000551316 ABCA9Q8IUA7 1624 aa24.49■■□□□ 1.51
SNRPF-203ENST00000551316 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
SNRPF-203ENST00000551316 RAPGEF3O95398 923 aa24.47■■□□□ 1.51
SNRPF-203ENST00000551316 PLPPR3Q6T4P5 718 aa24.44■■□□□ 1.5
SNRPF-203ENST00000551316 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
SNRPF-203ENST00000551316 CTTNBP2Q8WZ74 1663 aa24.42■■□□□ 1.5
SNRPF-203ENST00000551316 FER1L4A9Z1Z3 1794 aa24.42■■□□□ 1.5
SNRPF-203ENST00000551316 RICTORQ6R327 1708 aa24.41■■□□□ 1.5
SNRPF-203ENST00000551316 ARID4BQ4LE39 1312 aaPredicted RBP24.39■■□□□ 1.5
SNRPF-203ENST00000551316 PREX1Q8TCU6 1659 aa24.38■■□□□ 1.49
SNRPF-203ENST00000551316 TTC37Q6PGP7 1564 aa24.37■■□□□ 1.49
SNRPF-203ENST00000551316 NEO1Q92859 1461 aa24.32■■□□□ 1.48
SNRPF-203ENST00000551316 ARID3CA6NKF2 412 aa24.29■■□□□ 1.48
SNRPF-203ENST00000551316 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
SNRPF-203ENST00000551316 ATP10BO94823 1461 aa24.26■■□□□ 1.47
SNRPF-203ENST00000551316 LTBP4Q8N2S1 1624 aa24.25■■□□□ 1.47
SNRPF-203ENST00000551316 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
SNRPF-203ENST00000551316 YEATS2Q9ULM3 1422 aa24.23■■□□□ 1.47
SNRPF-203ENST00000551316 FANCAO15360 1455 aa24.23■■□□□ 1.47
SNRPF-203ENST00000551316 ZMYM4Q5VZL5 1548 aa24.21■■□□□ 1.47
SNRPF-203ENST00000551316 ZFYVE16Q7Z3T8 1539 aa24.18■■□□□ 1.46
SNRPF-203ENST00000551316 GOLGA3Q08378 1498 aa24.17■■□□□ 1.46
SNRPF-203ENST00000551316 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
SNRPF-203ENST00000551316 DENND4BO75064 1496 aaPredicted RBP24.13■■□□□ 1.45
SNRPF-203ENST00000551316 FHOD3Q2V2M9 1422 aa24.13■■□□□ 1.45
SNRPF-203ENST00000551316 AKNAQ7Z591 1439 aa24.12■■□□□ 1.45
SNRPF-203ENST00000551316 MLECQ14165 292 aa24.12■■□□□ 1.45
SNRPF-203ENST00000551316 POGZQ7Z3K3 1410 aa24.11■■□□□ 1.45
SNRPF-203ENST00000551316 EFCAB5A4FU69 1503 aa24.11■■□□□ 1.45
SNRPF-203ENST00000551316 HECW1Q76N89 1606 aa24.11■■□□□ 1.45
SNRPF-203ENST00000551316 CEBPAP49715 358 aaPredicted RBP24.07■■□□□ 1.44
SNRPF-203ENST00000551316 MED1Q15648 1581 aaPredicted RBP24.07■■□□□ 1.44
SNRPF-203ENST00000551316 IQSEC2Q5JU85 1478 aa24.07■■□□□ 1.44
SNRPF-203ENST00000551316 RAPGEF6Q8TEU7 1601 aa24.06■■□□□ 1.44
SNRPF-203ENST00000551316 CFAP74Q9C0B2 1584 aa24.06■■□□□ 1.44
SNRPF-203ENST00000551316 PTPRTO14522 1441 aa24.04■■□□□ 1.44
SNRPF-203ENST00000551316 C3P01024 1663 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms