RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
SCN8A-207ENST00000551216 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
SCN8A-207ENST00000551216 GRIN2BQ13224 1484 aa22.18■■□□□ 1.14
SCN8A-207ENST00000551216 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
SCN8A-207ENST00000551216 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.13
SCN8A-207ENST00000551216 SAMD9Q5K651 1589 aa22.09■■□□□ 1.13
SCN8A-207ENST00000551216 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
SCN8A-207ENST00000551216 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
SCN8A-207ENST00000551216 FYCO1Q9BQS8 1478 aa22.05■■□□□ 1.12
SCN8A-207ENST00000551216 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
SCN8A-207ENST00000551216 EIF4G3O43432 1585 aaKnown RBP22.02■■□□□ 1.12
SCN8A-207ENST00000551216 CFAP43Q8NDM7 1665 aa22.02■■□□□ 1.12
SCN8A-207ENST00000551216 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.11
SCN8A-207ENST00000551216 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
SCN8A-207ENST00000551216 PCF11O94913 1555 aaKnown RBP21.99■■□□□ 1.11
SCN8A-207ENST00000551216 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
SCN8A-207ENST00000551216 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
SCN8A-207ENST00000551216 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
SCN8A-207ENST00000551216 FHOD3Q2V2M9 1422 aa21.97■■□□□ 1.11
SCN8A-207ENST00000551216 KANK4Q5T7N3 995 aaPredicted RBP21.95■■□□□ 1.1
SCN8A-207ENST00000551216 LRRC9Q6ZRR7 1453 aa21.95■■□□□ 1.1
SCN8A-207ENST00000551216 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
SCN8A-207ENST00000551216 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
SCN8A-207ENST00000551216 KIAA0586Q9BVV6 1533 aa21.9■■□□□ 1.1
SCN8A-207ENST00000551216 GRIN2AQ12879 1464 aa21.89■■□□□ 1.09
SCN8A-207ENST00000551216 CCER1Q8TC90 406 aaPredicted RBP21.88■■□□□ 1.09
SCN8A-207ENST00000551216 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
SCN8A-207ENST00000551216 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
SCN8A-207ENST00000551216 CCNB3Q8WWL7 1395 aa21.84■■□□□ 1.09
SCN8A-207ENST00000551216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.08
SCN8A-207ENST00000551216 CCDC18Q5T9S5 1454 aa21.79■■□□□ 1.08
SCN8A-207ENST00000551216 HECW1Q76N89 1606 aa21.77■■□□□ 1.08
SCN8A-207ENST00000551216 HNRNPUL2Q1KMD3 747 aaKnown RBP21.77■■□□□ 1.07
SCN8A-207ENST00000551216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.76■■□□□ 1.07
SCN8A-207ENST00000551216 NUP160Q12769 1436 aa21.74■■□□□ 1.07
SCN8A-207ENST00000551216 KIAA0556O60303 1618 aa21.74■■□□□ 1.07
SCN8A-207ENST00000551216 CHMP7Q8WUX9 453 aaPredicted RBP21.73■■□□□ 1.07
SCN8A-207ENST00000551216 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
SCN8A-207ENST00000551216 EHBP1L1Q8N3D4 1523 aa21.71■■□□□ 1.07
SCN8A-207ENST00000551216 DISP1Q96F81 1524 aa21.7■■□□□ 1.06
SCN8A-207ENST00000551216 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
SCN8A-207ENST00000551216 PHLDB1Q86UU1 1377 aa21.7■■□□□ 1.06
SCN8A-207ENST00000551216 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
SCN8A-207ENST00000551216 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
SCN8A-207ENST00000551216 MTUS2Q5JR59 1369 aa21.67■■□□□ 1.06
SCN8A-207ENST00000551216 SUPT6HQ7KZ85 1726 aaKnown RBP21.67■■□□□ 1.06
SCN8A-207ENST00000551216 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
SCN8A-207ENST00000551216 CARMIL2Q6F5E8 1435 aa21.62■■□□□ 1.05
SCN8A-207ENST00000551216 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
SCN8A-207ENST00000551216 NCOA2Q15596 1464 aa21.58■■□□□ 1.05
SCN8A-207ENST00000551216 FGD6Q6ZV73 1430 aa21.58■■□□□ 1.05
SCN8A-207ENST00000551216 RAPGEF6Q8TEU7 1601 aa21.58■■□□□ 1.04
SCN8A-207ENST00000551216 MYOM3Q5VTT5 1437 aa21.56■■□□□ 1.04
SCN8A-207ENST00000551216 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
SCN8A-207ENST00000551216 FBLN2P98095 1184 aa21.51■■□□□ 1.03
SCN8A-207ENST00000551216 MAGI3Q5TCQ9 1506 aa21.51■■□□□ 1.03
SCN8A-207ENST00000551216 DHX57Q6P158 1386 aaKnown RBP21.51■■□□□ 1.03
SCN8A-207ENST00000551216 NUP153P49790 1475 aaKnown RBP21.5■■□□□ 1.03
SCN8A-207ENST00000551216 SETD5Q9C0A6 1442 aa21.5■■□□□ 1.03
SCN8A-207ENST00000551216 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
SCN8A-207ENST00000551216 MIA2Q96PC5 1412 aa21.47■■□□□ 1.03
SCN8A-207ENST00000551216 CDK11AQ9UQ88 783 aaPredicted RBP21.47■■□□□ 1.03
SCN8A-207ENST00000551216 CHD1O14646 1710 aa21.47■■□□□ 1.03
SCN8A-207ENST00000551216 TCOF1Q13428 1488 aaKnown RBP21.47■■□□□ 1.03
SCN8A-207ENST00000551216 CDK13Q14004 1512 aaKnown RBP21.46■■□□□ 1.03
SCN8A-207ENST00000551216 PTPN23Q9H3S7 1636 aa21.44■■□□□ 1.02
SCN8A-207ENST00000551216 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
SCN8A-207ENST00000551216 SHROOM2Q13796 1616 aa21.42■■□□□ 1.02
SCN8A-207ENST00000551216 ABCA8O94911 1581 aa21.41■■□□□ 1.02
SCN8A-207ENST00000551216 ITGAEP38570 1179 aa21.39■■□□□ 1.01
SCN8A-207ENST00000551216 ADCY10Q96PN6 1610 aa21.37■■□□□ 1.01
SCN8A-207ENST00000551216 PLB1Q6P1J6 1458 aa21.36■■□□□ 1.01
SCN8A-207ENST00000551216 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
SCN8A-207ENST00000551216 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
SCN8A-207ENST00000551216 AKNAQ7Z591 1439 aa21.35■■□□□ 1.01
SCN8A-207ENST00000551216 PRG4Q92954 1404 aaPredicted RBP21.35■■□□□ 1.01
SCN8A-207ENST00000551216 ACIN1Q9UKV3 1341 aaKnown RBP21.32■■□□□ 1
SCN8A-207ENST00000551216 ITSN2Q9NZM3 1697 aa21.32■■□□□ 1
SCN8A-207ENST00000551216 PTPRGP23470 1445 aa21.29■■□□□ 1
SCN8A-207ENST00000551216 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
SCN8A-207ENST00000551216 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
SCN8A-207ENST00000551216 GCC2Q8IWJ2 1684 aa21.26■□□□□ 0.99
SCN8A-207ENST00000551216 MAPKBP1O60336 1514 aa21.25■□□□□ 0.99
SCN8A-207ENST00000551216 NAIPQ13075 1403 aa21.24■□□□□ 0.99
SCN8A-207ENST00000551216 ATP10BO94823 1461 aa21.24■□□□□ 0.99
SCN8A-207ENST00000551216 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
SCN8A-207ENST00000551216 TIMELESSQ9UNS1 1208 aa21.22■□□□□ 0.99
SCN8A-207ENST00000551216 UACAQ9BZF9 1416 aa21.22■□□□□ 0.99
SCN8A-207ENST00000551216 KIF14Q15058 1648 aa21.21■□□□□ 0.99
SCN8A-207ENST00000551216 PLEKHD1A6NEE1 506 aa21.21■□□□□ 0.99
SCN8A-207ENST00000551216 ROCK1Q13464 1354 aa21.21■□□□□ 0.99
SCN8A-207ENST00000551216 ZNF316A6NFI3 1004 aaPredicted RBP21.19■□□□□ 0.98
SCN8A-207ENST00000551216 GPATCH8Q9UKJ3 1502 aaKnown RBP21.18■□□□□ 0.98
SCN8A-207ENST00000551216 ARID3CA6NKF2 412 aa21.18■□□□□ 0.98
SCN8A-207ENST00000551216 DAPK1P53355 1430 aa21.16■□□□□ 0.98
SCN8A-207ENST00000551216 ABCC10Q5T3U5 1492 aa21.15■□□□□ 0.98
SCN8A-207ENST00000551216 ABCC2Q92887 1545 aa21.14■□□□□ 0.98
SCN8A-207ENST00000551216 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
SCN8A-207ENST00000551216 UHRF1BP1LA0JNW5 1464 aa21.12■□□□□ 0.97
SCN8A-207ENST00000551216 CAMSAP2Q08AD1 1489 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms