RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
GPN3-208ENST00000550974 TSPOAP1O95153 1857 aa21.4■■□□□ 1.02
GPN3-208ENST00000550974 ABCA5Q8WWZ7 1642 aa21.38■■□□□ 1.01
GPN3-208ENST00000550974 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1
GPN3-208ENST00000550974 JPH4Q96JJ6 628 aa21.32■■□□□ 1
GPN3-208ENST00000550974 ADAMTS12P58397 1594 aa21.31■■□□□ 1
GPN3-208ENST00000550974 LMTK3Q96Q04 1460 aa21.3■■□□□ 1
GPN3-208ENST00000550974 ADCY10Q96PN6 1610 aa21.26■□□□□ 0.99
GPN3-208ENST00000550974 FHAD1B1AJZ9 1412 aa21.24■□□□□ 0.99
GPN3-208ENST00000550974 SOCS7O14512 581 aa21.12■□□□□ 0.97
GPN3-208ENST00000550974 COL17A1Q9UMD9 1497 aaPredicted RBP21.11■□□□□ 0.97
GPN3-208ENST00000550974 ILDR2Q71H61 639 aa21.09■□□□□ 0.97
GPN3-208ENST00000550974 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
GPN3-208ENST00000550974 PPRC1Q5VV67 1664 aaKnown RBP21.07■□□□□ 0.96
GPN3-208ENST00000550974 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
GPN3-208ENST00000550974 ERICH3Q5RHP9 1530 aa21.03■□□□□ 0.96
GPN3-208ENST00000550974 TOP2BQ02880 1626 aa21.02■□□□□ 0.96
GPN3-208ENST00000550974 TTBK1Q5TCY1 1321 aaPredicted RBP21.01■□□□□ 0.95
GPN3-208ENST00000550974 DISP3Q9P2K9 1392 aa20.99■□□□□ 0.95
GPN3-208ENST00000550974 GLI2P10070 1586 aa20.99■□□□□ 0.95
GPN3-208ENST00000550974 ASXL2Q76L83 1435 aa20.98■□□□□ 0.95
GPN3-208ENST00000550974 PLB1Q6P1J6 1458 aa20.96■□□□□ 0.95
GPN3-208ENST00000550974 PTPRGP23470 1445 aa20.92■□□□□ 0.94
GPN3-208ENST00000550974 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
GPN3-208ENST00000550974 TEX14Q8IWB6 1497 aa20.9■□□□□ 0.94
GPN3-208ENST00000550974 KIAA0586Q9BVV6 1533 aa20.84■□□□□ 0.93
GPN3-208ENST00000550974 MAP3K4Q9Y6R4 1608 aa20.84■□□□□ 0.93
GPN3-208ENST00000550974 EPRSP07814 1512 aaKnown RBP20.83■□□□□ 0.93
GPN3-208ENST00000550974 CUL7Q14999 1698 aa20.81■□□□□ 0.92
GPN3-208ENST00000550974 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
GPN3-208ENST00000550974 CERKQ8TCT0 537 aa20.77■□□□□ 0.92
GPN3-208ENST00000550974 BIVM-ERCC5R4GMW8 1640 aa20.77■□□□□ 0.92
GPN3-208ENST00000550974 PTPRMP28827 1452 aa20.76■□□□□ 0.91
GPN3-208ENST00000550974 KIF21BO75037 1637 aa20.75■□□□□ 0.91
GPN3-208ENST00000550974 UHRF1BP1LA0JNW5 1464 aa20.72■□□□□ 0.91
GPN3-208ENST00000550974 PCF11O94913 1555 aaKnown RBP20.71■□□□□ 0.91
GPN3-208ENST00000550974 CARMIL2Q6F5E8 1435 aa20.7■□□□□ 0.9
GPN3-208ENST00000550974 UACAQ9BZF9 1416 aa20.7■□□□□ 0.9
GPN3-208ENST00000550974 KDM5BQ9UGL1 1544 aa20.64■□□□□ 0.9
GPN3-208ENST00000550974 HSPA2P54652 639 aa20.64■□□□□ 0.89
GPN3-208ENST00000550974 SPATA31D1Q6ZQQ2 1576 aa20.63■□□□□ 0.89
GPN3-208ENST00000550974 ADAMTSL3P82987 1691 aa20.61■□□□□ 0.89
GPN3-208ENST00000550974 CD109Q6YHK3 1445 aa20.61■□□□□ 0.89
GPN3-208ENST00000550974 ZCCHC11Q5TAX3 1644 aaKnown RBP20.6■□□□□ 0.89
GPN3-208ENST00000550974 MAGI3Q5TCQ9 1506 aa20.58■□□□□ 0.89
GPN3-208ENST00000550974 WDR7Q9Y4E6 1490 aa20.57■□□□□ 0.88
GPN3-208ENST00000550974 IGF1RP08069 1367 aa20.56■□□□□ 0.88
GPN3-208ENST00000550974 KCNH8Q96L42 1107 aa20.55■□□□□ 0.88
GPN3-208ENST00000550974 ARID4BQ4LE39 1312 aaPredicted RBP20.53■□□□□ 0.88
GPN3-208ENST00000550974 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
GPN3-208ENST00000550974 MADDQ8WXG6 1647 aa20.5■□□□□ 0.87
GPN3-208ENST00000550974 CFAP43Q8NDM7 1665 aa20.48■□□□□ 0.87
GPN3-208ENST00000550974 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
GPN3-208ENST00000550974 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
GPN3-208ENST00000550974 BCORL1Q5H9F3 1711 aa20.46■□□□□ 0.87
GPN3-208ENST00000550974 ARAP3Q8WWN8 1544 aa20.45■□□□□ 0.86
GPN3-208ENST00000550974 RAPGEF3O95398 923 aa20.41■□□□□ 0.86
GPN3-208ENST00000550974 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
GPN3-208ENST00000550974 CARMIL1Q5VZK9 1371 aa20.4■□□□□ 0.86
GPN3-208ENST00000550974 RIMS1Q86UR5 1692 aaKnown RBP20.4■□□□□ 0.86
GPN3-208ENST00000550974 KIAA0556O60303 1618 aa20.3■□□□□ 0.84
GPN3-208ENST00000550974 PHLDB1Q86UU1 1377 aa20.29■□□□□ 0.84
GPN3-208ENST00000550974 UGGT2Q9NYU1 1516 aa20.28■□□□□ 0.84
GPN3-208ENST00000550974 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
GPN3-208ENST00000550974 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
GPN3-208ENST00000550974 YEATS2Q9ULM3 1422 aa20.23■□□□□ 0.83
GPN3-208ENST00000550974 FRMPD1Q5SYB0 1578 aa20.21■□□□□ 0.83
GPN3-208ENST00000550974 ARID3CA6NKF2 412 aa20.2■□□□□ 0.82
GPN3-208ENST00000550974 POGZQ7Z3K3 1410 aa20.19■□□□□ 0.82
GPN3-208ENST00000550974 MLECQ14165 292 aa20.19■□□□□ 0.82
GPN3-208ENST00000550974 ABCA8O94911 1581 aa20.18■□□□□ 0.82
GPN3-208ENST00000550974 NEO1Q92859 1461 aa20.18■□□□□ 0.82
GPN3-208ENST00000550974 ARHGEF40Q8TER5 1519 aa20.16■□□□□ 0.82
GPN3-208ENST00000550974 FANCAO15360 1455 aa20.14■□□□□ 0.81
GPN3-208ENST00000550974 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
GPN3-208ENST00000550974 ABCA9Q8IUA7 1624 aa20.13■□□□□ 0.81
GPN3-208ENST00000550974 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
GPN3-208ENST00000550974 PREX1Q8TCU6 1659 aa20.1■□□□□ 0.81
GPN3-208ENST00000550974 CEBPAP49715 358 aaPredicted RBP20.09■□□□□ 0.81
GPN3-208ENST00000550974 TTC37Q6PGP7 1564 aa20.08■□□□□ 0.81
GPN3-208ENST00000550974 LTBP4Q8N2S1 1624 aa20.07■□□□□ 0.8
GPN3-208ENST00000550974 DENND4BO75064 1496 aaPredicted RBP20.06■□□□□ 0.8
GPN3-208ENST00000550974 IQSEC2Q5JU85 1478 aa20.06■□□□□ 0.8
GPN3-208ENST00000550974 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
GPN3-208ENST00000550974 FER1L4A9Z1Z3 1794 aa20.06■□□□□ 0.8
GPN3-208ENST00000550974 PTPRTO14522 1441 aa20.06■□□□□ 0.8
GPN3-208ENST00000550974 ATP10BO94823 1461 aa20.05■□□□□ 0.8
GPN3-208ENST00000550974 SIGLEC1Q9BZZ2 1709 aa20.05■□□□□ 0.8
GPN3-208ENST00000550974 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
GPN3-208ENST00000550974 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
GPN3-208ENST00000550974 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.8
GPN3-208ENST00000550974 FHOD3Q2V2M9 1422 aa20.01■□□□□ 0.79
GPN3-208ENST00000550974 RICTORQ6R327 1708 aa20■□□□□ 0.79
GPN3-208ENST00000550974 ZFYVE16Q7Z3T8 1539 aa20■□□□□ 0.79
GPN3-208ENST00000550974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
GPN3-208ENST00000550974 HNRNPUL2Q1KMD3 747 aaKnown RBP19.98■□□□□ 0.79
GPN3-208ENST00000550974 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
GPN3-208ENST00000550974 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
GPN3-208ENST00000550974 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
GPN3-208ENST00000550974 ARHGEF12Q9NZN5 1544 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms