RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 CNGB1Q14028 1251 aaPredicted RBP6.62□□□□□ -1.35
APAF1-209ENST00000550527 IPO9Q96P70 1041 aaKnown RBP6.61□□□□□ -1.35
APAF1-209ENST00000550527 TIMELESSQ9UNS1 1208 aa6.61□□□□□ -1.35
APAF1-209ENST00000550527 ATP1B4Q9UN42 357 aaPredicted RBP6.61□□□□□ -1.35
APAF1-209ENST00000550527 AMER1Q5JTC6 1135 aaPredicted RBP6.57□□□□□ -1.36
APAF1-209ENST00000550527 GSE1Q14687 1217 aa6.56□□□□□ -1.36
APAF1-209ENST00000550527 FAM9BQ8IZU0 186 aa6.56□□□□□ -1.36
APAF1-209ENST00000550527 MSNP26038 577 aaKnown RBP6.55□□□□□ -1.36
APAF1-209ENST00000550527 PDE4CQ08493 712 aa6.55□□□□□ -1.36
APAF1-209ENST00000550527 ARID4BQ4LE39 1312 aaPredicted RBP6.55□□□□□ -1.36
APAF1-209ENST00000550527 IL27Q8NEV9 243 aa6.54□□□□□ -1.36
APAF1-209ENST00000550527 B4GALNT3Q6L9W6 998 aa6.54□□□□□ -1.36
APAF1-209ENST00000550527 CANXP27824 592 aaKnown RBP6.54□□□□□ -1.36
APAF1-209ENST00000550527 DNTTIP2Q5QJE6 756 aaKnown RBP6.54□□□□□ -1.36
APAF1-209ENST00000550527 CCER2I3L3R5 266 aa6.53□□□□□ -1.36
APAF1-209ENST00000550527 GOLGA6L22H0YM25 854 aa6.53□□□□□ -1.36
APAF1-209ENST00000550527 PTMSP20962 102 aa6.52□□□□□ -1.37
APAF1-209ENST00000550527 FAM43AQ8N2R8 423 aa6.52□□□□□ -1.37
APAF1-209ENST00000550527 RRP9O43818 475 aaKnown RBP6.52□□□□□ -1.37
APAF1-209ENST00000550527 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.51□□□□□ -1.37
APAF1-209ENST00000550527 PTMAP06454 111 aaKnown RBP6.51□□□□□ -1.37
APAF1-209ENST00000550527 MRS2Q9HD23 443 aa6.51□□□□□ -1.37
APAF1-209ENST00000550527 GOLGA6L3A6NEY3 463 aa6.5□□□□□ -1.37
APAF1-209ENST00000550527 TNNT3P45378 269 aaPredicted RBP6.5□□□□□ -1.37
APAF1-209ENST00000550527 FAM50AQ14320 339 aaKnown RBP6.5□□□□□ -1.37
APAF1-209ENST00000550527 TCERG1O14776 1098 aaKnown RBP6.49□□□□□ -1.37
APAF1-209ENST00000550527 TONSLQ96HA7 1378 aa6.49□□□□□ -1.37
APAF1-209ENST00000550527 ZMYND15Q9H091 742 aa6.49□□□□□ -1.37
APAF1-209ENST00000550527 MAP7D2Q96T17 732 aa6.48□□□□□ -1.37
APAF1-209ENST00000550527 TPM2P07951 284 aa6.47□□□□□ -1.37
APAF1-209ENST00000550527 CHAF1AQ13111 956 aaPredicted RBP6.47□□□□□ -1.37
APAF1-209ENST00000550527 EEA1Q15075 1411 aa6.46□□□□□ -1.38
APAF1-209ENST00000550527 MTERF4Q7Z6M4 381 aaKnown RBP6.46□□□□□ -1.38
APAF1-209ENST00000550527 PLEKHG5O94827 1062 aa6.45□□□□□ -1.38
APAF1-209ENST00000550527 ARID3AQ99856 593 aa6.45□□□□□ -1.38
APAF1-209ENST00000550527 BRPF3Q9ULD4 1205 aa6.45□□□□□ -1.38
APAF1-209ENST00000550527 APPP05067 770 aa6.44□□□□□ -1.38
APAF1-209ENST00000550527 TMC1Q8TDI8 760 aa6.44□□□□□ -1.38
APAF1-209ENST00000550527 MSH5O43196 834 aa6.43□□□□□ -1.38
APAF1-209ENST00000550527 MYH16Q9H6N6 1097 aa6.43□□□□□ -1.38
APAF1-209ENST00000550527 PDIA4P13667 645 aaKnown RBP6.42□□□□□ -1.38
APAF1-209ENST00000550527 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.42□□□□□ -1.38
APAF1-209ENST00000550527 ZNF771Q7L3S4 317 aaPredicted RBP6.41□□□□□ -1.38
APAF1-209ENST00000550527 FRAT1Q92837 279 aaPredicted RBP6.4□□□□□ -1.38
APAF1-209ENST00000550527 TAF7LQ5H9L4 462 aa6.4□□□□□ -1.39
APAF1-209ENST00000550527 TAF3Q5VWG9 929 aa6.4□□□□□ -1.39
APAF1-209ENST00000550527 FAM13BQ9NYF5 915 aa6.4□□□□□ -1.39
APAF1-209ENST00000550527 KIAA2012Q0VF49 1180 aa6.39□□□□□ -1.39
APAF1-209ENST00000550527 GZF1Q9H116 711 aaPredicted RBP6.39□□□□□ -1.39
APAF1-209ENST00000550527 GBP4Q96PP9 640 aa6.38□□□□□ -1.39
APAF1-209ENST00000550527 CSPP1Q1MSJ5 1256 aa6.38□□□□□ -1.39
APAF1-209ENST00000550527 RBM10P98175 930 aaKnown RBP6.38□□□□□ -1.39
APAF1-209ENST00000550527 HSCBQ8IWL3 235 aa6.38□□□□□ -1.39
APAF1-209ENST00000550527 NFKBIBQ15653 356 aa6.37□□□□□ -1.39
APAF1-209ENST00000550527 HIRIP3Q9BW71 556 aaPredicted RBP6.37□□□□□ -1.39
APAF1-209ENST00000550527 HSP90AB1P08238 724 aaKnown RBP6.37□□□□□ -1.39
APAF1-209ENST00000550527 PDE4AP27815 886 aa6.36□□□□□ -1.39
APAF1-209ENST00000550527 PAK3O75914 559 aaPredicted RBP6.36□□□□□ -1.39
APAF1-209ENST00000550527 MS4A1P11836 297 aa6.36□□□□□ -1.39
APAF1-209ENST00000550527 EIF4G2P78344 907 aaKnown RBP eCLIP6.36□□□□□ -1.39
APAF1-209ENST00000550527 DDX11L8A8MPP1 907 aa6.36□□□□□ -1.39
APAF1-209ENST00000550527 PDCL3Q9H2J4 239 aa6.36□□□□□ -1.39
APAF1-209ENST00000550527 RGS3P49796 1198 aa6.36□□□□□ -1.39
APAF1-209ENST00000550527 CEP162Q5TB80 1403 aa6.36□□□□□ -1.39
APAF1-209ENST00000550527 CCDC66A2RUB6 948 aa6.35□□□□□ -1.39
APAF1-209ENST00000550527 CALRP27797 417 aaKnown RBP6.35□□□□□ -1.39
APAF1-209ENST00000550527 BBXQ8WY36 941 aaPredicted RBP6.34□□□□□ -1.39
APAF1-209ENST00000550527 GOLGA6L6A8MZA4 724 aa6.34□□□□□ -1.39
APAF1-209ENST00000550527 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
APAF1-209ENST00000550527 GOLGA6L1Q8N7Z2 621 aa6.34□□□□□ -1.39
APAF1-209ENST00000550527 MRE11P49959 708 aa6.33□□□□□ -1.4
APAF1-209ENST00000550527 SKOR2Q2VWA4 1001 aaPredicted RBP6.33□□□□□ -1.4
APAF1-209ENST00000550527 NUDCQ9Y266 331 aa6.32□□□□□ -1.4
APAF1-209ENST00000550527 ABCC9O60706 1549 aa6.32□□□□□ -1.4
APAF1-209ENST00000550527 C11orf95C9JLR9 678 aaPredicted RBP6.32□□□□□ -1.4
APAF1-209ENST00000550527 WDR43Q15061 677 aaKnown RBP eCLIP6.31□□□□□ -1.4
APAF1-209ENST00000550527 SETQ01105 290 aaPredicted RBP6.31□□□□□ -1.4
APAF1-209ENST00000550527 PABPN1Q86U42 306 aaKnown RBP eCLIP6.31□□□□□ -1.4
APAF1-209ENST00000550527 KCNH8Q96L42 1107 aa6.31□□□□□ -1.4
APAF1-209ENST00000550527 SLC4A1APQ9BWU0 796 aaKnown RBP6.31□□□□□ -1.4
APAF1-209ENST00000550527 SPRYD3Q8NCJ5 442 aa6.31□□□□□ -1.4
APAF1-209ENST00000550527 PLCB2Q00722 1185 aa6.3□□□□□ -1.4
APAF1-209ENST00000550527 R3HCC1Q9Y3T6 440 aaKnown RBP6.3□□□□□ -1.4
APAF1-209ENST00000550527 SLC4A3P48751 1232 aa6.29□□□□□ -1.4
APAF1-209ENST00000550527 CALD1Q05682 793 aaKnown RBP6.29□□□□□ -1.4
APAF1-209ENST00000550527 FAM161AQ3B820 660 aa6.29□□□□□ -1.4
APAF1-209ENST00000550527 NRDCO43847 1150 aa6.29□□□□□ -1.4
APAF1-209ENST00000550527 NOM1Q5C9Z4 860 aaKnown RBP6.29□□□□□ -1.4
APAF1-209ENST00000550527 TNIKQ9UKE5 1360 aa6.29□□□□□ -1.4
APAF1-209ENST00000550527 ZBTB7CA1YPR0 619 aa6.29□□□□□ -1.4
APAF1-209ENST00000550527 TSPYL1Q9H0U9 437 aa6.29□□□□□ -1.4
APAF1-209ENST00000550527 SYAP1Q96A49 352 aaPredicted RBP6.28□□□□□ -1.4
APAF1-209ENST00000550527 RCAN3Q9UKA8 241 aa6.28□□□□□ -1.4
APAF1-209ENST00000550527 TEX35Q5T0J7 233 aa6.28□□□□□ -1.4
APAF1-209ENST00000550527 KIAA1211Q6ZU35 1233 aa6.28□□□□□ -1.4
APAF1-209ENST00000550527 CLIP1P30622 1438 aa6.28□□□□□ -1.4
APAF1-209ENST00000550527 FGD1P98174 961 aa6.28□□□□□ -1.4
APAF1-209ENST00000550527 BCL11BQ9C0K0 894 aaPredicted RBP6.27□□□□□ -1.41
APAF1-209ENST00000550527 NAP1L2Q9ULW6 460 aaPredicted RBP6.27□□□□□ -1.41
APAF1-209ENST00000550527 ISY1Q9ULR0 285 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms