RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
LETMD1-223ENST00000550442 ABCA10Q8WWZ4 1543 aa18.68■□□□□ 0.58
LETMD1-223ENST00000550442 DIP2BQ9P265 1576 aa18.66■□□□□ 0.58
LETMD1-223ENST00000550442 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
LETMD1-223ENST00000550442 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
LETMD1-223ENST00000550442 MAPKBP1O60336 1514 aa18.64■□□□□ 0.57
LETMD1-223ENST00000550442 TSPOAP1O95153 1857 aa18.63■□□□□ 0.57
LETMD1-223ENST00000550442 PRG4Q92954 1404 aaPredicted RBP18.62■□□□□ 0.57
LETMD1-223ENST00000550442 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
LETMD1-223ENST00000550442 HRCP23327 699 aa18.55■□□□□ 0.56
LETMD1-223ENST00000550442 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
LETMD1-223ENST00000550442 ADGRL1O94910 1474 aa18.54■□□□□ 0.56
LETMD1-223ENST00000550442 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
LETMD1-223ENST00000550442 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
LETMD1-223ENST00000550442 HECW2Q9P2P5 1572 aa18.54■□□□□ 0.56
LETMD1-223ENST00000550442 TNIKQ9UKE5 1360 aa18.54■□□□□ 0.56
LETMD1-223ENST00000550442 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
LETMD1-223ENST00000550442 ADCY10Q96PN6 1610 aa18.5■□□□□ 0.55
LETMD1-223ENST00000550442 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
LETMD1-223ENST00000550442 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
LETMD1-223ENST00000550442 FBXO41Q8TF61 875 aa18.44■□□□□ 0.54
LETMD1-223ENST00000550442 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
LETMD1-223ENST00000550442 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
LETMD1-223ENST00000550442 RUSC2Q8N2Y8 1516 aa18.41■□□□□ 0.54
LETMD1-223ENST00000550442 KIF21BO75037 1637 aa18.4■□□□□ 0.54
LETMD1-223ENST00000550442 BIVM-ERCC5R4GMW8 1640 aa18.4■□□□□ 0.54
LETMD1-223ENST00000550442 PPRC1Q5VV67 1664 aaKnown RBP18.32■□□□□ 0.52
LETMD1-223ENST00000550442 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
LETMD1-223ENST00000550442 GLI2P10070 1586 aa18.29■□□□□ 0.52
LETMD1-223ENST00000550442 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
LETMD1-223ENST00000550442 UBTFP17480 764 aaKnown RBP18.26■□□□□ 0.51
LETMD1-223ENST00000550442 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
LETMD1-223ENST00000550442 ABCC2Q92887 1545 aa18.23■□□□□ 0.51
LETMD1-223ENST00000550442 KIAA0586Q9BVV6 1533 aa18.23■□□□□ 0.51
LETMD1-223ENST00000550442 PTPRGP23470 1445 aa18.23■□□□□ 0.51
LETMD1-223ENST00000550442 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
LETMD1-223ENST00000550442 TEX14Q8IWB6 1497 aa18.22■□□□□ 0.51
LETMD1-223ENST00000550442 COL17A1Q9UMD9 1497 aaPredicted RBP18.22■□□□□ 0.51
LETMD1-223ENST00000550442 TTBK1Q5TCY1 1321 aaPredicted RBP18.21■□□□□ 0.51
LETMD1-223ENST00000550442 LMTK3Q96Q04 1460 aa18.2■□□□□ 0.5
LETMD1-223ENST00000550442 CUL7Q14999 1698 aa18.18■□□□□ 0.5
LETMD1-223ENST00000550442 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
LETMD1-223ENST00000550442 PRXQ9BXM0 1461 aa18.16■□□□□ 0.5
LETMD1-223ENST00000550442 CARMIL2Q6F5E8 1435 aa18.13■□□□□ 0.49
LETMD1-223ENST00000550442 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
LETMD1-223ENST00000550442 CLIP1P30622 1438 aa18.11■□□□□ 0.49
LETMD1-223ENST00000550442 UHRF1BP1LA0JNW5 1464 aa18.1■□□□□ 0.49
LETMD1-223ENST00000550442 VPS8Q8N3P4 1428 aa18.06■□□□□ 0.48
LETMD1-223ENST00000550442 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
LETMD1-223ENST00000550442 RAPGEF2Q9Y4G8 1499 aa18.04■□□□□ 0.48
LETMD1-223ENST00000550442 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
LETMD1-223ENST00000550442 SOCS7O14512 581 aa18.02■□□□□ 0.48
LETMD1-223ENST00000550442 APLP2Q06481 763 aa18.02■□□□□ 0.48
LETMD1-223ENST00000550442 KDM5BQ9UGL1 1544 aa18.02■□□□□ 0.47
LETMD1-223ENST00000550442 ZCCHC11Q5TAX3 1644 aaKnown RBP18.01■□□□□ 0.47
LETMD1-223ENST00000550442 IGF1RP08069 1367 aa17.98■□□□□ 0.47
LETMD1-223ENST00000550442 IQGAP2Q13576 1575 aa17.96■□□□□ 0.47
LETMD1-223ENST00000550442 PTPRMP28827 1452 aa17.96■□□□□ 0.47
LETMD1-223ENST00000550442 DISP3Q9P2K9 1392 aa17.96■□□□□ 0.47
LETMD1-223ENST00000550442 WDR7Q9Y4E6 1490 aa17.95■□□□□ 0.46
LETMD1-223ENST00000550442 CFAP43Q8NDM7 1665 aa17.94■□□□□ 0.46
LETMD1-223ENST00000550442 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
LETMD1-223ENST00000550442 PCF11O94913 1555 aaKnown RBP17.93■□□□□ 0.46
LETMD1-223ENST00000550442 CD109Q6YHK3 1445 aa17.93■□□□□ 0.46
LETMD1-223ENST00000550442 ILDR2Q71H61 639 aa17.92■□□□□ 0.46
LETMD1-223ENST00000550442 ADAMTSL3P82987 1691 aa17.9■□□□□ 0.46
LETMD1-223ENST00000550442 DISP1Q96F81 1524 aa17.89■□□□□ 0.45
LETMD1-223ENST00000550442 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
LETMD1-223ENST00000550442 CERKQ8TCT0 537 aa17.86■□□□□ 0.45
LETMD1-223ENST00000550442 MAP3K1Q13233 1512 aa17.85■□□□□ 0.45
LETMD1-223ENST00000550442 KCNH8Q96L42 1107 aa17.84■□□□□ 0.45
LETMD1-223ENST00000550442 ARAP3Q8WWN8 1544 aa17.82■□□□□ 0.44
LETMD1-223ENST00000550442 BCORL1Q5H9F3 1711 aa17.81■□□□□ 0.44
LETMD1-223ENST00000550442 KIAA0556O60303 1618 aa17.8■□□□□ 0.44
LETMD1-223ENST00000550442 MADDQ8WXG6 1647 aa17.8■□□□□ 0.44
LETMD1-223ENST00000550442 UGGT2Q9NYU1 1516 aa17.79■□□□□ 0.44
LETMD1-223ENST00000550442 ARID4BQ4LE39 1312 aaPredicted RBP17.78■□□□□ 0.44
LETMD1-223ENST00000550442 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
LETMD1-223ENST00000550442 SPATA31D1Q6ZQQ2 1576 aa17.75■□□□□ 0.43
LETMD1-223ENST00000550442 HSPA2P54652 639 aa17.75■□□□□ 0.43
LETMD1-223ENST00000550442 RIMS1Q86UR5 1692 aaKnown RBP17.74■□□□□ 0.43
LETMD1-223ENST00000550442 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
LETMD1-223ENST00000550442 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
LETMD1-223ENST00000550442 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
LETMD1-223ENST00000550442 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
LETMD1-223ENST00000550442 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
LETMD1-223ENST00000550442 RAPGEF3O95398 923 aa17.68■□□□□ 0.42
LETMD1-223ENST00000550442 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
LETMD1-223ENST00000550442 ABCA8O94911 1581 aa17.66■□□□□ 0.42
LETMD1-223ENST00000550442 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.41
LETMD1-223ENST00000550442 NEO1Q92859 1461 aa17.63■□□□□ 0.41
LETMD1-223ENST00000550442 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
LETMD1-223ENST00000550442 POGZQ7Z3K3 1410 aa17.6■□□□□ 0.41
LETMD1-223ENST00000550442 ARHGEF40Q8TER5 1519 aa17.6■□□□□ 0.41
LETMD1-223ENST00000550442 FRMPD1Q5SYB0 1578 aa17.6■□□□□ 0.41
LETMD1-223ENST00000550442 FMN1Q68DA7 1419 aa17.59■□□□□ 0.41
LETMD1-223ENST00000550442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.4
LETMD1-223ENST00000550442 CTTNBP2Q8WZ74 1663 aa17.58■□□□□ 0.4
LETMD1-223ENST00000550442 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
LETMD1-223ENST00000550442 FANCAO15360 1455 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms