RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
EFCAB11-203ENST00000550103 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
EFCAB11-203ENST00000550103 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
EFCAB11-203ENST00000550103 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
EFCAB11-203ENST00000550103 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
EFCAB11-203ENST00000550103 SHROOM4Q9ULL8 1493 aa12.53□□□□□ -0.4
EFCAB11-203ENST00000550103 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
EFCAB11-203ENST00000550103 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
EFCAB11-203ENST00000550103 GSE1Q14687 1217 aa12.48□□□□□ -0.41
EFCAB11-203ENST00000550103 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
EFCAB11-203ENST00000550103 NBR1Q14596 966 aa12.41□□□□□ -0.42
EFCAB11-203ENST00000550103 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
EFCAB11-203ENST00000550103 CC2D2AQ9P2K1 1620 aa12.34□□□□□ -0.43
EFCAB11-203ENST00000550103 NUBP1P53384 320 aa12.33□□□□□ -0.44
EFCAB11-203ENST00000550103 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
EFCAB11-203ENST00000550103 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
EFCAB11-203ENST00000550103 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
EFCAB11-203ENST00000550103 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
EFCAB11-203ENST00000550103 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
EFCAB11-203ENST00000550103 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
EFCAB11-203ENST00000550103 SPDYE1Q8NFV5 336 aaPredicted RBP12.25□□□□□ -0.45
EFCAB11-203ENST00000550103 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
EFCAB11-203ENST00000550103 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
EFCAB11-203ENST00000550103 RYDENQ9NUL5 291 aaKnown RBP12.22□□□□□ -0.45
EFCAB11-203ENST00000550103 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
EFCAB11-203ENST00000550103 SMARCA4P51532 1647 aa12.2□□□□□ -0.46
EFCAB11-203ENST00000550103 STK25O00506 426 aa12.2□□□□□ -0.46
EFCAB11-203ENST00000550103 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
EFCAB11-203ENST00000550103 CECR2Q9BXF3 1484 aa12.15□□□□□ -0.46
EFCAB11-203ENST00000550103 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
EFCAB11-203ENST00000550103 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
EFCAB11-203ENST00000550103 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
EFCAB11-203ENST00000550103 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
EFCAB11-203ENST00000550103 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
EFCAB11-203ENST00000550103 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
EFCAB11-203ENST00000550103 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
EFCAB11-203ENST00000550103 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
EFCAB11-203ENST00000550103 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
EFCAB11-203ENST00000550103 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-203ENST00000550103 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
EFCAB11-203ENST00000550103 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
EFCAB11-203ENST00000550103 P3H3Q8IVL6 736 aa12.05□□□□□ -0.48
EFCAB11-203ENST00000550103 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
EFCAB11-203ENST00000550103 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
EFCAB11-203ENST00000550103 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
EFCAB11-203ENST00000550103 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
EFCAB11-203ENST00000550103 WIZO95785 1651 aa12.01□□□□□ -0.49
EFCAB11-203ENST00000550103 PYGBP11216 843 aa11.99□□□□□ -0.49
EFCAB11-203ENST00000550103 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
EFCAB11-203ENST00000550103 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
EFCAB11-203ENST00000550103 ATAD2BQ9ULI0 1458 aa11.98□□□□□ -0.49
EFCAB11-203ENST00000550103 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-203ENST00000550103 GTF3C3Q9Y5Q9 886 aa11.95□□□□□ -0.5
EFCAB11-203ENST00000550103 WDR70Q9NW82 654 aa11.94□□□□□ -0.5
EFCAB11-203ENST00000550103 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
EFCAB11-203ENST00000550103 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
EFCAB11-203ENST00000550103 TMEM132AQ24JP5 1023 aa11.91□□□□□ -0.5
EFCAB11-203ENST00000550103 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
EFCAB11-203ENST00000550103 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
EFCAB11-203ENST00000550103 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
EFCAB11-203ENST00000550103 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
EFCAB11-203ENST00000550103 TOP2AP11388 1531 aaKnown RBP11.83□□□□□ -0.52
EFCAB11-203ENST00000550103 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
EFCAB11-203ENST00000550103 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.82□□□□□ -0.52
EFCAB11-203ENST00000550103 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
EFCAB11-203ENST00000550103 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
EFCAB11-203ENST00000550103 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
EFCAB11-203ENST00000550103 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
EFCAB11-203ENST00000550103 CADPS2Q86UW7 1296 aa11.8□□□□□ -0.52
EFCAB11-203ENST00000550103 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
EFCAB11-203ENST00000550103 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.53
EFCAB11-203ENST00000550103 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
EFCAB11-203ENST00000550103 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
EFCAB11-203ENST00000550103 NESP48681 1621 aa11.74□□□□□ -0.53
EFCAB11-203ENST00000550103 PSEN1P49768 467 aa11.73□□□□□ -0.53
EFCAB11-203ENST00000550103 MFRPQ9BY79 579 aa11.73□□□□□ -0.53
EFCAB11-203ENST00000550103 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
EFCAB11-203ENST00000550103 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-203ENST00000550103 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
EFCAB11-203ENST00000550103 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
EFCAB11-203ENST00000550103 SUPT5HO00267 1087 aaKnown RBP11.69□□□□□ -0.54
EFCAB11-203ENST00000550103 THOC2Q8NI27 1593 aaKnown RBP11.69□□□□□ -0.54
EFCAB11-203ENST00000550103 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
EFCAB11-203ENST00000550103 SOX12O15370 315 aa11.67□□□□□ -0.54
EFCAB11-203ENST00000550103 NLRP6P59044 892 aa11.67□□□□□ -0.54
EFCAB11-203ENST00000550103 E2F4Q16254 413 aa11.67□□□□□ -0.54
EFCAB11-203ENST00000550103 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
EFCAB11-203ENST00000550103 ARXQ96QS3 562 aa11.64□□□□□ -0.55
EFCAB11-203ENST00000550103 PAK3O75914 559 aaPredicted RBP11.61□□□□□ -0.55
EFCAB11-203ENST00000550103 FBXO22Q8NEZ5 403 aa11.61□□□□□ -0.55
EFCAB11-203ENST00000550103 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
EFCAB11-203ENST00000550103 PPP1R37O75864 691 aa11.6□□□□□ -0.55
EFCAB11-203ENST00000550103 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
EFCAB11-203ENST00000550103 C14orf37Q86TY3 774 aa11.6□□□□□ -0.55
EFCAB11-203ENST00000550103 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
EFCAB11-203ENST00000550103 EFCAB3Q8N7B9 438 aa11.59□□□□□ -0.55
EFCAB11-203ENST00000550103 CCDC88BA6NC98 1476 aa11.58□□□□□ -0.56
EFCAB11-203ENST00000550103 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
EFCAB11-203ENST00000550103 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
EFCAB11-203ENST00000550103 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms