RNA–Protein interactions for RNA: ENST00000549872.5

CHPT1-205, Transcript of choline phosphotransferase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHPT1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-205ENST00000549872 ARHGAP35Q9NRY4 1499 aa41.74■■■■■ 4.27
CHPT1-205ENST00000549872 SNAPC4Q5SXM2 1469 aa41.68■■■■■ 4.26
CHPT1-205ENST00000549872 TRIM26Q12899 539 aaPredicted RBP41.68■■■■■ 4.26
CHPT1-205ENST00000549872 MAGI1Q96QZ7 1491 aaPredicted RBP41.54■■■■■ 4.24
CHPT1-205ENST00000549872 TTBK1Q5TCY1 1321 aaPredicted RBP41.45■■■■■ 4.23
CHPT1-205ENST00000549872 EFCAB5A4FU69 1503 aa41.44■■■■■ 4.23
CHPT1-205ENST00000549872 P3H3Q8IVL6 736 aa41.44■■■■■ 4.22
CHPT1-205ENST00000549872 GRIN2AQ12879 1464 aa41.43■■■■■ 4.22
CHPT1-205ENST00000549872 SYNJ2O15056 1496 aa41.4■■■■■ 4.22
CHPT1-205ENST00000549872 APLP2Q06481 763 aa41.37■■■■■ 4.21
CHPT1-205ENST00000549872 FHOD3Q2V2M9 1422 aa41.35■■■■■ 4.21
CHPT1-205ENST00000549872 CHMP7Q8WUX9 453 aaPredicted RBP41.35■■■■■ 4.21
CHPT1-205ENST00000549872 IQGAP2Q13576 1575 aa41.35■■■■■ 4.21
CHPT1-205ENST00000549872 SAMD9Q5K651 1589 aa41.32■■■■■ 4.21
CHPT1-205ENST00000549872 FBLN2P98095 1184 aa41.3■■■■■ 4.2
CHPT1-205ENST00000549872 KIAA0586Q9BVV6 1533 aa41.22■■■■■ 4.19
CHPT1-205ENST00000549872 CEP170Q5SW79 1584 aa41.2■■■■■ 4.19
CHPT1-205ENST00000549872 PCF11O94913 1555 aaKnown RBP41.15■■■■■ 4.18
CHPT1-205ENST00000549872 UGGT2Q9NYU1 1516 aa41.12■■■■■ 4.17
CHPT1-205ENST00000549872 NUP160Q12769 1436 aa41.1■■■■■ 4.17
CHPT1-205ENST00000549872 FMN1Q68DA7 1419 aa41.09■■■■■ 4.17
CHPT1-205ENST00000549872 KANK4Q5T7N3 995 aaPredicted RBP41.06■■■■■ 4.16
CHPT1-205ENST00000549872 CASKIN1Q8WXD9 1431 aa41.02■■■■■ 4.16
CHPT1-205ENST00000549872 FYCO1Q9BQS8 1478 aa41.02■■■■■ 4.16
CHPT1-205ENST00000549872 CHD1O14646 1710 aa41.01■■■■■ 4.16
CHPT1-205ENST00000549872 ATP1B4Q9UN42 357 aaPredicted RBP41■■■■■ 4.15
CHPT1-205ENST00000549872 TIAM1Q13009 1591 aa41■■■■■ 4.15
CHPT1-205ENST00000549872 MAP3K1Q13233 1512 aa40.98■■■■■ 4.15
CHPT1-205ENST00000549872 DISP1Q96F81 1524 aa40.95■■■■■ 4.15
CHPT1-205ENST00000549872 KIAA0556O60303 1618 aa40.93■■■■■ 4.14
CHPT1-205ENST00000549872 CFAP43Q8NDM7 1665 aa40.91■■■■■ 4.14
CHPT1-205ENST00000549872 JPH4Q96JJ6 628 aa40.84■■■■■ 4.13
CHPT1-205ENST00000549872 LRRIQ1Q96JM4 1722 aa40.8■■■■■ 4.12
CHPT1-205ENST00000549872 LRRC9Q6ZRR7 1453 aa40.8■■■■■ 4.12
CHPT1-205ENST00000549872 CARMIL2Q6F5E8 1435 aa40.7■■■■■ 4.11
CHPT1-205ENST00000549872 HECW1Q76N89 1606 aa40.67■■■■■ 4.1
CHPT1-205ENST00000549872 PRG4Q92954 1404 aaPredicted RBP40.57■■■■■ 4.09
CHPT1-205ENST00000549872 CCDC18Q5T9S5 1454 aa40.57■■■■■ 4.08
CHPT1-205ENST00000549872 RAPGEF6Q8TEU7 1601 aa40.55■■■■■ 4.08
CHPT1-205ENST00000549872 EPRSP07814 1512 aaKnown RBP40.54■■■■■ 4.08
CHPT1-205ENST00000549872 SHROOM2Q13796 1616 aa40.54■■■■■ 4.08
CHPT1-205ENST00000549872 HRCP23327 699 aa40.52■■■■■ 4.08
CHPT1-205ENST00000549872 RRBP1Q9P2E9 1410 aaKnown RBP40.52■■■■■ 4.08
CHPT1-205ENST00000549872 MTUS2Q5JR59 1369 aa40.51■■■■■ 4.07
CHPT1-205ENST00000549872 CDK13Q14004 1512 aaKnown RBP40.49■■■■■ 4.07
CHPT1-205ENST00000549872 ARID3CA6NKF2 412 aa40.48■■■■■ 4.07
CHPT1-205ENST00000549872 PHLDB1Q86UU1 1377 aa40.48■■■■■ 4.07
CHPT1-205ENST00000549872 CLASP1Q7Z460 1538 aa40.47■■■■■ 4.07
CHPT1-205ENST00000549872 NUP153P49790 1475 aaKnown RBP40.46■■■■■ 4.07
CHPT1-205ENST00000549872 HNRNPUL2Q1KMD3 747 aaKnown RBP40.46■■■■■ 4.07
CHPT1-205ENST00000549872 PLB1Q6P1J6 1458 aa40.46■■■■■ 4.07
CHPT1-205ENST00000549872 MAGI3Q5TCQ9 1506 aa40.43■■■■■ 4.06
CHPT1-205ENST00000549872 CCNB3Q8WWL7 1395 aa40.41■■■■■ 4.06
CHPT1-205ENST00000549872 EHBP1L1Q8N3D4 1523 aa40.4■■■■■ 4.06
CHPT1-205ENST00000549872 ERCC6L2Q5T890 1561 aa40.34■■■■■ 4.05
CHPT1-205ENST00000549872 SUPT6HQ7KZ85 1726 aaKnown RBP40.33■■■■■ 4.05
CHPT1-205ENST00000549872 ABCA8O94911 1581 aa40.32■■■■■ 4.05
CHPT1-205ENST00000549872 PTPRGP23470 1445 aa40.31■■■■■ 4.04
CHPT1-205ENST00000549872 NCOA2Q15596 1464 aa40.3■■■■■ 4.04
CHPT1-205ENST00000549872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.25■■■■■ 4.03
CHPT1-205ENST00000549872 ARHGEF11O15085 1522 aa40.2■■■■■ 4.03
CHPT1-205ENST00000549872 FAM50AQ14320 339 aaKnown RBP40.15■■■■■ 4.02
CHPT1-205ENST00000549872 FGD6Q6ZV73 1430 aa40.14■■■■■ 4.02
CHPT1-205ENST00000549872 CDK11AQ9UQ88 783 aaPredicted RBP40.14■■■■■ 4.02
CHPT1-205ENST00000549872 ITGAEP38570 1179 aa40.13■■■■■ 4.02
CHPT1-205ENST00000549872 MYOM3Q5VTT5 1437 aa40.13■■■■■ 4.01
CHPT1-205ENST00000549872 ATP10BO94823 1461 aa40.09■■■■■ 4.01
CHPT1-205ENST00000549872 UACAQ9BZF9 1416 aa40.08■■■■■ 4.01
CHPT1-205ENST00000549872 OSCARQ8IYS5 282 aa40.07■■■■■ 4.01
CHPT1-205ENST00000549872 CCER1Q8TC90 406 aaPredicted RBP40.06■■■■■ 4
CHPT1-205ENST00000549872 TROQ12816 1431 aaPredicted RBP40.04■■■■■ 4
CHPT1-205ENST00000549872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.02■■■■■ 46e-6■□□□□ 11
CHPT1-205ENST00000549872 PTPN23Q9H3S7 1636 aa39.95■■■■□ 3.99
CHPT1-205ENST00000549872 ABCC2Q92887 1545 aa39.95■■■■□ 3.99
CHPT1-205ENST00000549872 ZEB1P37275 1124 aaPredicted RBP39.94■■■■□ 3.98
CHPT1-205ENST00000549872 KIF14Q15058 1648 aa39.92■■■■□ 3.98
CHPT1-205ENST00000549872 ADCY10Q96PN6 1610 aa39.92■■■■□ 3.98
CHPT1-205ENST00000549872 PLEKHD1A6NEE1 506 aa39.92■■■■□ 3.98
CHPT1-205ENST00000549872 MIA2Q96PC5 1412 aa39.85■■■■□ 3.97
CHPT1-205ENST00000549872 TCOF1Q13428 1488 aaKnown RBP39.84■■■■□ 3.97
CHPT1-205ENST00000549872 UHRF1BP1LA0JNW5 1464 aa39.8■■■■□ 3.96
CHPT1-205ENST00000549872 PTPRKQ15262 1439 aa39.74■■■■□ 3.95
CHPT1-205ENST00000549872 ITSN2Q9NZM3 1697 aa39.73■■■■□ 3.95
CHPT1-205ENST00000549872 GPATCH8Q9UKJ3 1502 aaKnown RBP39.72■■■■□ 3.95
CHPT1-205ENST00000549872 ZCCHC11Q5TAX3 1644 aaKnown RBP39.72■■■■□ 3.95
CHPT1-205ENST00000549872 ABCC10Q5T3U5 1492 aa39.7■■■■□ 3.95
CHPT1-205ENST00000549872 SETD5Q9C0A6 1442 aa39.69■■■■□ 3.94
CHPT1-205ENST00000549872 RAB3GAP2Q9H2M9 1393 aa39.69■■■■□ 3.94
CHPT1-205ENST00000549872 KDM5BQ9UGL1 1544 aa39.69■■■■□ 3.94
CHPT1-205ENST00000549872 CDC42BPAQ5VT25 1732 aa39.65■■■■□ 3.94
CHPT1-205ENST00000549872 ZNF644Q9H582 1327 aaPredicted RBP39.64■■■■□ 3.94
CHPT1-205ENST00000549872 CFDP1Q9UEE9 299 aaPredicted RBP39.64■■■■□ 3.94
CHPT1-205ENST00000549872 DHX57Q6P158 1386 aaKnown RBP39.58■■■■□ 3.93
CHPT1-205ENST00000549872 CAMSAP2Q08AD1 1489 aa39.56■■■■□ 3.92
CHPT1-205ENST00000549872 ZNF777Q9ULD5 760 aaPredicted RBP39.53■■■■□ 3.92
CHPT1-205ENST00000549872 DNMT1P26358 1616 aaKnown RBP39.51■■■■□ 3.92
CHPT1-205ENST00000549872 CHIC2Q9UKJ5 165 aa39.51■■■■□ 3.92
CHPT1-205ENST00000549872 HFM1A2PYH4 1435 aa39.51■■■■□ 3.92
CHPT1-205ENST00000549872 DAPK1P53355 1430 aa39.49■■■■□ 3.91
CHPT1-205ENST00000549872 TTC37Q6PGP7 1564 aa39.49■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms