RNA–Protein interactions for RNA: ENST00000549733.5

NPIPB12-204, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 4

Gene NPIPB12, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-204ENST00000549733 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
NPIPB12-204ENST00000549733 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
NPIPB12-204ENST00000549733 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.46
NPIPB12-204ENST00000549733 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
NPIPB12-204ENST00000549733 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
NPIPB12-204ENST00000549733 EVX2Q03828 476 aa12.12□□□□□ -0.47
NPIPB12-204ENST00000549733 TRIM41Q8WV44 630 aa12.1□□□□□ -0.47
NPIPB12-204ENST00000549733 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
NPIPB12-204ENST00000549733 NCAPD3P42695 1498 aa12.06□□□□□ -0.48
NPIPB12-204ENST00000549733 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
NPIPB12-204ENST00000549733 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
NPIPB12-204ENST00000549733 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
NPIPB12-204ENST00000549733 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
NPIPB12-204ENST00000549733 NUBP1P53384 320 aa11.96□□□□□ -0.49
NPIPB12-204ENST00000549733 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
NPIPB12-204ENST00000549733 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
NPIPB12-204ENST00000549733 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
NPIPB12-204ENST00000549733 NESP48681 1621 aa11.95□□□□□ -0.5
NPIPB12-204ENST00000549733 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
NPIPB12-204ENST00000549733 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
NPIPB12-204ENST00000549733 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
NPIPB12-204ENST00000549733 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
NPIPB12-204ENST00000549733 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
NPIPB12-204ENST00000549733 GABBR2O75899 941 aa11.87□□□□□ -0.51
NPIPB12-204ENST00000549733 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
NPIPB12-204ENST00000549733 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
NPIPB12-204ENST00000549733 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
NPIPB12-204ENST00000549733 SPOCK2Q92563 424 aa11.84□□□□□ -0.51
NPIPB12-204ENST00000549733 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
NPIPB12-204ENST00000549733 CLCN6P51797 869 aa11.83□□□□□ -0.52
NPIPB12-204ENST00000549733 SMARCA2P51531 1590 aa11.8□□□□□ -0.52
NPIPB12-204ENST00000549733 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
NPIPB12-204ENST00000549733 DCAF8Q5TAQ9 597 aa11.77□□□□□ -0.53
NPIPB12-204ENST00000549733 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.53
NPIPB12-204ENST00000549733 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
NPIPB12-204ENST00000549733 GALR2O43603 387 aaPredicted RBP11.74□□□□□ -0.53
NPIPB12-204ENST00000549733 GSE1Q14687 1217 aa11.74□□□□□ -0.53
NPIPB12-204ENST00000549733 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
NPIPB12-204ENST00000549733 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
NPIPB12-204ENST00000549733 SMARCA4P51532 1647 aa11.71□□□□□ -0.54
NPIPB12-204ENST00000549733 MAP3K13O43283 966 aa11.7□□□□□ -0.54
NPIPB12-204ENST00000549733 KIF21AQ7Z4S6 1674 aa11.69□□□□□ -0.54
NPIPB12-204ENST00000549733 PYGBP11216 843 aa11.67□□□□□ -0.54
NPIPB12-204ENST00000549733 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
NPIPB12-204ENST00000549733 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
NPIPB12-204ENST00000549733 WDR62O43379 1518 aa11.66□□□□□ -0.54
NPIPB12-204ENST00000549733 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
NPIPB12-204ENST00000549733 BAZ1AQ9NRL2 1556 aaPredicted RBP11.66□□□□□ -0.54
NPIPB12-204ENST00000549733 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
NPIPB12-204ENST00000549733 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
NPIPB12-204ENST00000549733 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
NPIPB12-204ENST00000549733 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
NPIPB12-204ENST00000549733 RSF1Q96T23 1441 aaPredicted RBP11.63□□□□□ -0.55
NPIPB12-204ENST00000549733 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
NPIPB12-204ENST00000549733 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
NPIPB12-204ENST00000549733 IFNL1Q8IU54 200 aa11.6□□□□□ -0.55
NPIPB12-204ENST00000549733 TRPC6Q9Y210 931 aa11.6□□□□□ -0.55
NPIPB12-204ENST00000549733 RIMBP3CA6NJZ7 1639 aa11.56□□□□□ -0.56
NPIPB12-204ENST00000549733 RIMBP3BA6NNM3 1639 aa11.56□□□□□ -0.56
NPIPB12-204ENST00000549733 RIMBP3Q9UFD9 1639 aa11.56□□□□□ -0.56
NPIPB12-204ENST00000549733 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
NPIPB12-204ENST00000549733 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
NPIPB12-204ENST00000549733 TIE1P35590 1138 aa11.53□□□□□ -0.56
NPIPB12-204ENST00000549733 BMP2KQ9NSY1 1161 aaPredicted RBP11.53□□□□□ -0.56
NPIPB12-204ENST00000549733 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
NPIPB12-204ENST00000549733 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
NPIPB12-204ENST00000549733 MROH2BQ7Z745 1585 aa11.52□□□□□ -0.57
NPIPB12-204ENST00000549733 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
NPIPB12-204ENST00000549733 CEP164Q9UPV0 1460 aa11.5□□□□□ -0.57
NPIPB12-204ENST00000549733 PKD2Q13563 968 aa11.49□□□□□ -0.57
NPIPB12-204ENST00000549733 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
NPIPB12-204ENST00000549733 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
NPIPB12-204ENST00000549733 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
NPIPB12-204ENST00000549733 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
NPIPB12-204ENST00000549733 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
NPIPB12-204ENST00000549733 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
NPIPB12-204ENST00000549733 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
NPIPB12-204ENST00000549733 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
NPIPB12-204ENST00000549733 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
NPIPB12-204ENST00000549733 CFTRP13569 1480 aa11.41□□□□□ -0.58
NPIPB12-204ENST00000549733 PDAP1Q13442 181 aaKnown RBP11.41□□□□□ -0.58
NPIPB12-204ENST00000549733 WIZO95785 1651 aa11.4□□□□□ -0.58
NPIPB12-204ENST00000549733 RIOK3O14730 519 aaKnown RBP11.4□□□□□ -0.58
NPIPB12-204ENST00000549733 PSEN1P49768 467 aa11.4□□□□□ -0.58
NPIPB12-204ENST00000549733 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
NPIPB12-204ENST00000549733 SLC39A7Q92504 469 aa11.39□□□□□ -0.59
NPIPB12-204ENST00000549733 C7P10643 843 aa11.37□□□□□ -0.59
NPIPB12-204ENST00000549733 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
NPIPB12-204ENST00000549733 ARAP1Q96P48 1450 aa11.37□□□□□ -0.59
NPIPB12-204ENST00000549733 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
NPIPB12-204ENST00000549733 RGL2O15211 777 aa11.34□□□□□ -0.59
NPIPB12-204ENST00000549733 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
NPIPB12-204ENST00000549733 IER5LQ5T953 404 aa11.33□□□□□ -0.6
NPIPB12-204ENST00000549733 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
NPIPB12-204ENST00000549733 TOP2AP11388 1531 aaKnown RBP11.32□□□□□ -0.6
NPIPB12-204ENST00000549733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.29□□□□□ -0.6
NPIPB12-204ENST00000549733 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
NPIPB12-204ENST00000549733 LHX8Q68G74 356 aa11.29□□□□□ -0.6
NPIPB12-204ENST00000549733 ZFP91Q96JP5 570 aaPredicted RBP11.29□□□□□ -0.6
NPIPB12-204ENST00000549733 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms