RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 JPH4Q96JJ6 628 aa19.6■□□□□ 0.73
TRAFD1-206ENST00000549358 NPM1P06748 294 aaKnown RBP eCLIP19.57■□□□□ 0.72
TRAFD1-206ENST00000549358 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
TRAFD1-206ENST00000549358 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
TRAFD1-206ENST00000549358 ABCC10Q5T3U5 1492 aa19.53■□□□□ 0.72
TRAFD1-206ENST00000549358 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
TRAFD1-206ENST00000549358 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
TRAFD1-206ENST00000549358 KDM4FA0A1W2PPD8 638 aa19.49■□□□□ 0.71
TRAFD1-206ENST00000549358 MAPKBP1O60336 1514 aa19.45■□□□□ 0.7
TRAFD1-206ENST00000549358 DIP2BQ9P265 1576 aa19.43■□□□□ 0.7
TRAFD1-206ENST00000549358 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
TRAFD1-206ENST00000549358 KDM6BO15054 1643 aa19.4■□□□□ 0.7
TRAFD1-206ENST00000549358 ADCY10Q96PN6 1610 aa19.4■□□□□ 0.7
TRAFD1-206ENST00000549358 ILDR1Q86SU0 546 aaPredicted RBP19.38■□□□□ 0.69
TRAFD1-206ENST00000549358 TSPOAP1O95153 1857 aa19.31■□□□□ 0.68
TRAFD1-206ENST00000549358 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
TRAFD1-206ENST00000549358 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
TRAFD1-206ENST00000549358 IGF1RP08069 1367 aa19.26■□□□□ 0.67
TRAFD1-206ENST00000549358 PTPRGP23470 1445 aa19.25■□□□□ 0.67
TRAFD1-206ENST00000549358 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
TRAFD1-206ENST00000549358 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
TRAFD1-206ENST00000549358 ADGRL1O94910 1474 aa19.17■□□□□ 0.66
TRAFD1-206ENST00000549358 ABCC2Q92887 1545 aa19.17■□□□□ 0.66
TRAFD1-206ENST00000549358 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
TRAFD1-206ENST00000549358 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
TRAFD1-206ENST00000549358 CARMIL2Q6F5E8 1435 aa19.15■□□□□ 0.66
TRAFD1-206ENST00000549358 PLB1Q6P1J6 1458 aa19.15■□□□□ 0.66
TRAFD1-206ENST00000549358 CUL7Q14999 1698 aa19.14■□□□□ 0.66
TRAFD1-206ENST00000549358 GLI2P10070 1586 aa19.12■□□□□ 0.65
TRAFD1-206ENST00000549358 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
TRAFD1-206ENST00000549358 COL17A1Q9UMD9 1497 aaPredicted RBP19.1■□□□□ 0.65
TRAFD1-206ENST00000549358 CARMIL1Q5VZK9 1371 aa19.1■□□□□ 0.65
TRAFD1-206ENST00000549358 UHRF1BP1LA0JNW5 1464 aa19.07■□□□□ 0.64
TRAFD1-206ENST00000549358 UACAQ9BZF9 1416 aa19.07■□□□□ 0.64
TRAFD1-206ENST00000549358 HECW2Q9P2P5 1572 aa19.04■□□□□ 0.64
TRAFD1-206ENST00000549358 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
TRAFD1-206ENST00000549358 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
TRAFD1-206ENST00000549358 TEX14Q8IWB6 1497 aa19.01■□□□□ 0.63
TRAFD1-206ENST00000549358 MAP3K4Q9Y6R4 1608 aa19■□□□□ 0.63
TRAFD1-206ENST00000549358 DISP1Q96F81 1524 aa19■□□□□ 0.63
TRAFD1-206ENST00000549358 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
TRAFD1-206ENST00000549358 ZCCHC11Q5TAX3 1644 aaKnown RBP18.94■□□□□ 0.62
TRAFD1-206ENST00000549358 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
TRAFD1-206ENST00000549358 WDR7Q9Y4E6 1490 aa18.89■□□□□ 0.61
TRAFD1-206ENST00000549358 UGGT2Q9NYU1 1516 aa18.89■□□□□ 0.61
TRAFD1-206ENST00000549358 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
TRAFD1-206ENST00000549358 CD109Q6YHK3 1445 aa18.86■□□□□ 0.61
TRAFD1-206ENST00000549358 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
TRAFD1-206ENST00000549358 MSH5O43196 834 aa18.83■□□□□ 0.6
TRAFD1-206ENST00000549358 FBXO41Q8TF61 875 aa18.82■□□□□ 0.6
TRAFD1-206ENST00000549358 MAGI3Q5TCQ9 1506 aa18.82■□□□□ 0.6
TRAFD1-206ENST00000549358 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
TRAFD1-206ENST00000549358 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
TRAFD1-206ENST00000549358 KIF21BO75037 1637 aa18.75■□□□□ 0.59
TRAFD1-206ENST00000549358 PIAS4Q8N2W9 510 aaPredicted RBP18.74■□□□□ 0.59
TRAFD1-206ENST00000549358 GOLGA3Q08378 1498 aa18.72■□□□□ 0.59
TRAFD1-206ENST00000549358 ABCA8O94911 1581 aa18.72■□□□□ 0.59
TRAFD1-206ENST00000549358 ARID3CA6NKF2 412 aa18.71■□□□□ 0.59
TRAFD1-206ENST00000549358 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
TRAFD1-206ENST00000549358 ADRA2BP18089 450 aa18.68■□□□□ 0.58
TRAFD1-206ENST00000549358 PTPRMP28827 1452 aa18.68■□□□□ 0.58
TRAFD1-206ENST00000549358 RAPGEF3O95398 923 aa18.66■□□□□ 0.58
TRAFD1-206ENST00000549358 FAM9AQ8IZU1 332 aaPredicted RBP18.65■□□□□ 0.58
TRAFD1-206ENST00000549358 CTTNBP2Q8WZ74 1663 aa18.65■□□□□ 0.58
TRAFD1-206ENST00000549358 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
TRAFD1-206ENST00000549358 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
TRAFD1-206ENST00000549358 ADAMTSL3P82987 1691 aa18.62■□□□□ 0.57
TRAFD1-206ENST00000549358 ATP10BO94823 1461 aa18.61■□□□□ 0.57
TRAFD1-206ENST00000549358 PHLDB1Q86UU1 1377 aa18.61■□□□□ 0.57
TRAFD1-206ENST00000549358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
TRAFD1-206ENST00000549358 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
TRAFD1-206ENST00000549358 ABCA9Q8IUA7 1624 aa18.56■□□□□ 0.56
TRAFD1-206ENST00000549358 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
TRAFD1-206ENST00000549358 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
TRAFD1-206ENST00000549358 NEO1Q92859 1461 aa18.53■□□□□ 0.56
TRAFD1-206ENST00000549358 PRXQ9BXM0 1461 aa18.53■□□□□ 0.56
TRAFD1-206ENST00000549358 MADDQ8WXG6 1647 aa18.52■□□□□ 0.56
TRAFD1-206ENST00000549358 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.56
TRAFD1-206ENST00000549358 HSPA2P54652 639 aa18.51■□□□□ 0.55
TRAFD1-206ENST00000549358 FRMPD1Q5SYB0 1578 aa18.48■□□□□ 0.55
TRAFD1-206ENST00000549358 RIMS1Q86UR5 1692 aaKnown RBP18.44■□□□□ 0.54
TRAFD1-206ENST00000549358 RAPGEF6Q8TEU7 1601 aa18.43■□□□□ 0.54
TRAFD1-206ENST00000549358 CERKQ8TCT0 537 aa18.43■□□□□ 0.54
TRAFD1-206ENST00000549358 DENND4BO75064 1496 aaPredicted RBP18.42■□□□□ 0.54
TRAFD1-206ENST00000549358 PLEKHD1A6NEE1 506 aa18.41■□□□□ 0.54
TRAFD1-206ENST00000549358 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
TRAFD1-206ENST00000549358 ARHGEF40Q8TER5 1519 aa18.4■□□□□ 0.54
TRAFD1-206ENST00000549358 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
TRAFD1-206ENST00000549358 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.54
TRAFD1-206ENST00000549358 SAMD9Q5K651 1589 aa18.39■□□□□ 0.53
TRAFD1-206ENST00000549358 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
TRAFD1-206ENST00000549358 POGZQ7Z3K3 1410 aa18.39■□□□□ 0.53
TRAFD1-206ENST00000549358 MLECQ14165 292 aa18.38■□□□□ 0.53
TRAFD1-206ENST00000549358 FHOD3Q2V2M9 1422 aa18.37■□□□□ 0.53
TRAFD1-206ENST00000549358 FANCAO15360 1455 aa18.37■□□□□ 0.53
TRAFD1-206ENST00000549358 RICTORQ6R327 1708 aa18.36■□□□□ 0.53
TRAFD1-206ENST00000549358 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
TRAFD1-206ENST00000549358 YEATS2Q9ULM3 1422 aa18.34■□□□□ 0.53
TRAFD1-206ENST00000549358 ZFYVE16Q7Z3T8 1539 aa18.32■□□□□ 0.52
TRAFD1-206ENST00000549358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms