RNA–Protein interactions for RNA: ENST00000549340.5

LETMD1-218, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-218ENST00000549340 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.221e-6■■□□□ 12.7
LETMD1-218ENST00000549340 APLP2Q06481 763 aa22.65■■□□□ 1.22
LETMD1-218ENST00000549340 PPARGC1BQ86YN6 1023 aaKnown RBP22.65■■□□□ 1.22
LETMD1-218ENST00000549340 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.22
LETMD1-218ENST00000549340 HRCP23327 699 aa22.64■■□□□ 1.21
LETMD1-218ENST00000549340 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
LETMD1-218ENST00000549340 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
LETMD1-218ENST00000549340 SAMD9Q5K651 1589 aa22.58■■□□□ 1.2
LETMD1-218ENST00000549340 MAGI1Q96QZ7 1491 aaPredicted RBP22.53■■□□□ 1.2
LETMD1-218ENST00000549340 IQGAP2Q13576 1575 aa22.5■■□□□ 1.19
LETMD1-218ENST00000549340 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
LETMD1-218ENST00000549340 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
LETMD1-218ENST00000549340 TIAM1Q13009 1591 aa22.48■■□□□ 1.19
LETMD1-218ENST00000549340 PCF11O94913 1555 aaKnown RBP22.47■■□□□ 1.19
LETMD1-218ENST00000549340 FYCO1Q9BQS8 1478 aa22.47■■□□□ 1.19
LETMD1-218ENST00000549340 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
LETMD1-218ENST00000549340 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
LETMD1-218ENST00000549340 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
LETMD1-218ENST00000549340 CASKIN1Q8WXD9 1431 aa22.43■■□□□ 1.18
LETMD1-218ENST00000549340 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
LETMD1-218ENST00000549340 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
LETMD1-218ENST00000549340 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
LETMD1-218ENST00000549340 KIAA0586Q9BVV6 1533 aa22.4■■□□□ 1.18
LETMD1-218ENST00000549340 ZEB1P37275 1124 aaPredicted RBP22.35■■□□□ 1.17
LETMD1-218ENST00000549340 KANK4Q5T7N3 995 aaPredicted RBP22.34■■□□□ 1.17
LETMD1-218ENST00000549340 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
LETMD1-218ENST00000549340 P3H3Q8IVL6 736 aa22.33■■□□□ 1.17
LETMD1-218ENST00000549340 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
LETMD1-218ENST00000549340 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
LETMD1-218ENST00000549340 NUP160Q12769 1436 aa22.28■■□□□ 1.16
LETMD1-218ENST00000549340 KIAA0556O60303 1618 aa22.27■■□□□ 1.16
LETMD1-218ENST00000549340 LRRIQ1Q96JM4 1722 aa22.26■■□□□ 1.15
LETMD1-218ENST00000549340 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
LETMD1-218ENST00000549340 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
LETMD1-218ENST00000549340 CCDC18Q5T9S5 1454 aa22.22■■□□□ 1.15
LETMD1-218ENST00000549340 DISP1Q96F81 1524 aa22.21■■□□□ 1.15
LETMD1-218ENST00000549340 CCNB3Q8WWL7 1395 aa22.16■■□□□ 1.14
LETMD1-218ENST00000549340 CHD1O14646 1710 aa22.15■■□□□ 1.14
LETMD1-218ENST00000549340 EHBP1L1Q8N3D4 1523 aa22.15■■□□□ 1.14
LETMD1-218ENST00000549340 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
LETMD1-218ENST00000549340 SUPT6HQ7KZ85 1726 aaKnown RBP22.11■■□□□ 1.13
LETMD1-218ENST00000549340 CARMIL2Q6F5E8 1435 aa22.1■■□□□ 1.13
LETMD1-218ENST00000549340 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
LETMD1-218ENST00000549340 EPRSP07814 1512 aaKnown RBP22.08■■□□□ 1.13
LETMD1-218ENST00000549340 HNRNPUL2Q1KMD3 747 aaKnown RBP22.08■■□□□ 1.13
LETMD1-218ENST00000549340 PHLDB1Q86UU1 1377 aa22.08■■□□□ 1.12
LETMD1-218ENST00000549340 FBLN2P98095 1184 aa22.07■■□□□ 1.12
LETMD1-218ENST00000549340 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
LETMD1-218ENST00000549340 DNAJC5Q9H3Z4 198 aa22.07■■□□□ 1.12
LETMD1-218ENST00000549340 MTUS2Q5JR59 1369 aa22.07■■□□□ 1.12
LETMD1-218ENST00000549340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
LETMD1-218ENST00000549340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.06■■□□□ 1.12
LETMD1-218ENST00000549340 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
LETMD1-218ENST00000549340 JPH4Q96JJ6 628 aa22.03■■□□□ 1.12
LETMD1-218ENST00000549340 SHROOM2Q13796 1616 aa22.01■■□□□ 1.11
LETMD1-218ENST00000549340 NCOA2Q15596 1464 aa22■■□□□ 1.11
LETMD1-218ENST00000549340 MAGI3Q5TCQ9 1506 aa22■■□□□ 1.11
LETMD1-218ENST00000549340 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
LETMD1-218ENST00000549340 CDK13Q14004 1512 aaKnown RBP21.97■■□□□ 1.11
LETMD1-218ENST00000549340 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
LETMD1-218ENST00000549340 MYOM3Q5VTT5 1437 aa21.95■■□□□ 1.1
LETMD1-218ENST00000549340 ABCA8O94911 1581 aa21.94■■□□□ 1.1
LETMD1-218ENST00000549340 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.09
LETMD1-218ENST00000549340 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
LETMD1-218ENST00000549340 ADCY10Q96PN6 1610 aa21.88■■□□□ 1.09
LETMD1-218ENST00000549340 PTPN23Q9H3S7 1636 aa21.88■■□□□ 1.09
LETMD1-218ENST00000549340 PLB1Q6P1J6 1458 aa21.87■■□□□ 1.09
LETMD1-218ENST00000549340 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
LETMD1-218ENST00000549340 TCOF1Q13428 1488 aaKnown RBP21.86■■□□□ 1.09
LETMD1-218ENST00000549340 CDK11AQ9UQ88 783 aaPredicted RBP21.86■■□□□ 1.09
LETMD1-218ENST00000549340 MIA2Q96PC5 1412 aa21.85■■□□□ 1.09
LETMD1-218ENST00000549340 FAM50AQ14320 339 aaKnown RBP21.84■■□□□ 1.09
LETMD1-218ENST00000549340 TROQ12816 1431 aaPredicted RBP21.81■■□□□ 1.08
LETMD1-218ENST00000549340 SETD5Q9C0A6 1442 aa21.8■■□□□ 1.08
LETMD1-218ENST00000549340 PTPRGP23470 1445 aa21.8■■□□□ 1.08
LETMD1-218ENST00000549340 DHX57Q6P158 1386 aaKnown RBP21.79■■□□□ 1.08
LETMD1-218ENST00000549340 ITSN2Q9NZM3 1697 aa21.79■■□□□ 1.08
LETMD1-218ENST00000549340 ITGAEP38570 1179 aa21.76■■□□□ 1.07
LETMD1-218ENST00000549340 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
LETMD1-218ENST00000549340 ATP10BO94823 1461 aa21.73■■□□□ 1.07
LETMD1-218ENST00000549340 UACAQ9BZF9 1416 aa21.71■■□□□ 1.07
LETMD1-218ENST00000549340 KIF14Q15058 1648 aa21.7■■□□□ 1.06
LETMD1-218ENST00000549340 ARID3CA6NKF2 412 aa21.69■■□□□ 1.06
LETMD1-218ENST00000549340 HFM1A2PYH4 1435 aa21.69■■□□□ 1.06
LETMD1-218ENST00000549340 AKNAQ7Z591 1439 aa21.69■■□□□ 1.06
LETMD1-218ENST00000549340 ABCC2Q92887 1545 aa21.68■■□□□ 1.06
LETMD1-218ENST00000549340 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
LETMD1-218ENST00000549340 GCC2Q8IWJ2 1684 aa21.68■■□□□ 1.06
LETMD1-218ENST00000549340 PTPRKQ15262 1439 aa21.66■■□□□ 1.06
LETMD1-218ENST00000549340 DNMT1P26358 1616 aaKnown RBP21.66■■□□□ 1.06
LETMD1-218ENST00000549340 PLEKHD1A6NEE1 506 aa21.64■■□□□ 1.05
LETMD1-218ENST00000549340 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
LETMD1-218ENST00000549340 CDC42BPAQ5VT25 1732 aa21.63■■□□□ 1.05
LETMD1-218ENST00000549340 GPATCH8Q9UKJ3 1502 aaKnown RBP21.62■■□□□ 1.05
LETMD1-218ENST00000549340 ABCC10Q5T3U5 1492 aa21.62■■□□□ 1.05
LETMD1-218ENST00000549340 NAIPQ13075 1403 aa21.6■■□□□ 1.05
LETMD1-218ENST00000549340 MAPKBP1O60336 1514 aa21.58■■□□□ 1.04
LETMD1-218ENST00000549340 CROCC2H7BZ55 1655 aa21.56■■□□□ 1.04
LETMD1-218ENST00000549340 DAPK1P53355 1430 aa21.56■■□□□ 1.04
LETMD1-218ENST00000549340 ROCK1Q13464 1354 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms