RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
TROAP-208ENST00000548817 PRG4Q92954 1404 aaPredicted RBP15.57■□□□□ 0.08
TROAP-208ENST00000548817 ERICH3Q5RHP9 1530 aa15.51■□□□□ 0.07
TROAP-208ENST00000548817 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
TROAP-208ENST00000548817 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
TROAP-208ENST00000548817 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
TROAP-208ENST00000548817 ADGRL1O94910 1474 aa15.48■□□□□ 0.07
TROAP-208ENST00000548817 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
TROAP-208ENST00000548817 TSPOAP1O95153 1857 aa15.47■□□□□ 0.07
TROAP-208ENST00000548817 RUSC2Q8N2Y8 1516 aa15.45■□□□□ 0.06
TROAP-208ENST00000548817 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
TROAP-208ENST00000548817 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
TROAP-208ENST00000548817 GLI2P10070 1586 aa15.37■□□□□ 0.05
TROAP-208ENST00000548817 FBXO41Q8TF61 875 aa15.37■□□□□ 0.05
TROAP-208ENST00000548817 PPRC1Q5VV67 1664 aaKnown RBP15.35■□□□□ 0.05
TROAP-208ENST00000548817 PLB1Q6P1J6 1458 aa15.32■□□□□ 0.04
TROAP-208ENST00000548817 KIAA0586Q9BVV6 1533 aa15.31■□□□□ 0.04
TROAP-208ENST00000548817 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
TROAP-208ENST00000548817 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.03
TROAP-208ENST00000548817 ASXL2Q76L83 1435 aa15.26■□□□□ 0.03
TROAP-208ENST00000548817 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
TROAP-208ENST00000548817 PTPRGP23470 1445 aa15.26■□□□□ 0.03
TROAP-208ENST00000548817 MAP3K4Q9Y6R4 1608 aa15.24■□□□□ 0.03
TROAP-208ENST00000548817 UHRF1BP1LA0JNW5 1464 aa15.21■□□□□ 0.03
TROAP-208ENST00000548817 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
TROAP-208ENST00000548817 TNIKQ9UKE5 1360 aa15.19■□□□□ 0.02
TROAP-208ENST00000548817 CUL7Q14999 1698 aa15.19■□□□□ 0.02
TROAP-208ENST00000548817 CARMIL2Q6F5E8 1435 aa15.18■□□□□ 0.02
TROAP-208ENST00000548817 EPRSP07814 1512 aaKnown RBP15.18■□□□□ 0.02
TROAP-208ENST00000548817 LMTK3Q96Q04 1460 aa15.14■□□□□ 0.01
TROAP-208ENST00000548817 KDM5BQ9UGL1 1544 aa15.14■□□□□ 0.01
TROAP-208ENST00000548817 UACAQ9BZF9 1416 aa15.13■□□□□ 0.01
TROAP-208ENST00000548817 IGF1RP08069 1367 aa15.09■□□□□ 0.01
TROAP-208ENST00000548817 MAGI3Q5TCQ9 1506 aa15.07■□□□□ 0
TROAP-208ENST00000548817 IQGAP2Q13576 1575 aa15.07■□□□□ 0
TROAP-208ENST00000548817 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
TROAP-208ENST00000548817 KIF27Q86VH2 1401 aa15.06■□□□□ 0
TROAP-208ENST00000548817 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ -0
TROAP-208ENST00000548817 CFAP43Q8NDM7 1665 aa15.04■□□□□ -0
TROAP-208ENST00000548817 KIF21BO75037 1637 aa15.04■□□□□ -0
TROAP-208ENST00000548817 WDR7Q9Y4E6 1490 aa15.04■□□□□ -0
TROAP-208ENST00000548817 PTPRMP28827 1452 aa15.02■□□□□ -0
TROAP-208ENST00000548817 DISP1Q96F81 1524 aa15.02□□□□□ -0.01
TROAP-208ENST00000548817 SOCS7O14512 581 aa15.01□□□□□ -0.01
TROAP-208ENST00000548817 PCF11O94913 1555 aaKnown RBP15.01□□□□□ -0.01
TROAP-208ENST00000548817 ADAMTSL3P82987 1691 aa15□□□□□ -0.01
TROAP-208ENST00000548817 CD109Q6YHK3 1445 aa15□□□□□ -0.01
TROAP-208ENST00000548817 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
TROAP-208ENST00000548817 ARAP3Q8WWN8 1544 aa14.97□□□□□ -0.01
TROAP-208ENST00000548817 UGGT2Q9NYU1 1516 aa14.96□□□□□ -0.02
TROAP-208ENST00000548817 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
TROAP-208ENST00000548817 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
TROAP-208ENST00000548817 DISP3Q9P2K9 1392 aa14.9□□□□□ -0.02
TROAP-208ENST00000548817 BCORL1Q5H9F3 1711 aa14.9□□□□□ -0.02
TROAP-208ENST00000548817 ILDR2Q71H61 639 aa14.88□□□□□ -0.03
TROAP-208ENST00000548817 CERKQ8TCT0 537 aa14.88□□□□□ -0.03
TROAP-208ENST00000548817 MADDQ8WXG6 1647 aa14.88□□□□□ -0.03
TROAP-208ENST00000548817 ABCA8O94911 1581 aa14.84□□□□□ -0.03
TROAP-208ENST00000548817 KCNH8Q96L42 1107 aa14.83□□□□□ -0.04
TROAP-208ENST00000548817 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
TROAP-208ENST00000548817 NEO1Q92859 1461 aa14.8□□□□□ -0.04
TROAP-208ENST00000548817 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
TROAP-208ENST00000548817 SPATA31D1Q6ZQQ2 1576 aa14.8□□□□□ -0.04
TROAP-208ENST00000548817 ABCA9Q8IUA7 1624 aa14.8□□□□□ -0.04
TROAP-208ENST00000548817 RIMS1Q86UR5 1692 aaKnown RBP14.79□□□□□ -0.04
TROAP-208ENST00000548817 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
TROAP-208ENST00000548817 ARHGEF40Q8TER5 1519 aa14.76□□□□□ -0.05
TROAP-208ENST00000548817 HSPA2P54652 639 aa14.76□□□□□ -0.05
TROAP-208ENST00000548817 FRMPD1Q5SYB0 1578 aa14.76□□□□□ -0.05
TROAP-208ENST00000548817 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
TROAP-208ENST00000548817 POGZQ7Z3K3 1410 aa14.74□□□□□ -0.05
TROAP-208ENST00000548817 CTTNBP2Q8WZ74 1663 aa14.73□□□□□ -0.05
TROAP-208ENST00000548817 FANCAO15360 1455 aa14.7□□□□□ -0.06
TROAP-208ENST00000548817 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
TROAP-208ENST00000548817 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
TROAP-208ENST00000548817 ATP10BO94823 1461 aa14.68□□□□□ -0.06
TROAP-208ENST00000548817 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
TROAP-208ENST00000548817 AKNAQ7Z591 1439 aa14.66□□□□□ -0.06
TROAP-208ENST00000548817 RICTORQ6R327 1708 aa14.66□□□□□ -0.06
TROAP-208ENST00000548817 PREX1Q8TCU6 1659 aa14.66□□□□□ -0.06
TROAP-208ENST00000548817 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
TROAP-208ENST00000548817 YEATS2Q9ULM3 1422 aa14.66□□□□□ -0.06
TROAP-208ENST00000548817 DENND4BO75064 1496 aaPredicted RBP14.65□□□□□ -0.06
TROAP-208ENST00000548817 ZMYM4Q5VZL5 1548 aa14.65□□□□□ -0.06
TROAP-208ENST00000548817 FER1L4A9Z1Z3 1794 aa14.64□□□□□ -0.07
TROAP-208ENST00000548817 IQSEC2Q5JU85 1478 aa14.63□□□□□ -0.07
TROAP-208ENST00000548817 EFCAB5A4FU69 1503 aa14.63□□□□□ -0.07
TROAP-208ENST00000548817 CFAP74Q9C0B2 1584 aa14.63□□□□□ -0.07
TROAP-208ENST00000548817 MAGI2Q86UL8 1455 aa14.63□□□□□ -0.07
TROAP-208ENST00000548817 ZFYVE16Q7Z3T8 1539 aa14.61□□□□□ -0.07
TROAP-208ENST00000548817 STRCQ7RTU9 1775 aa14.6□□□□□ -0.07
TROAP-208ENST00000548817 SIGLEC1Q9BZZ2 1709 aa14.58□□□□□ -0.08
TROAP-208ENST00000548817 PTPRTO14522 1441 aa14.58□□□□□ -0.08
TROAP-208ENST00000548817 ARHGEF12Q9NZN5 1544 aa14.57□□□□□ -0.08
TROAP-208ENST00000548817 PLPPR3Q6T4P5 718 aa14.57□□□□□ -0.08
TROAP-208ENST00000548817 RAPGEF6Q8TEU7 1601 aa14.55□□□□□ -0.08
TROAP-208ENST00000548817 ARID3CA6NKF2 412 aa14.54□□□□□ -0.08
TROAP-208ENST00000548817 UHRF1BP1Q6BDS2 1440 aa14.54□□□□□ -0.08
TROAP-208ENST00000548817 SETD1BQ9UPS6 1966 aaKnown RBP14.54□□□□□ -0.08
TROAP-208ENST00000548817 LTBP4Q8N2S1 1624 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms