RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 AQRO60306 1485 aaKnown RBP eCLIP10.71□□□□□ -0.69
PDZRN4-204ENST00000548316 LRRC9Q6ZRR7 1453 aa10.71□□□□□ -0.7
PDZRN4-204ENST00000548316 NEUROD1Q13562 356 aa10.7□□□□□ -0.7
PDZRN4-204ENST00000548316 POTEDQ86YR6 584 aa10.7□□□□□ -0.7
PDZRN4-204ENST00000548316 SAMD9Q5K651 1589 aa10.7□□□□□ -0.7
PDZRN4-204ENST00000548316 MAPKBP1O60336 1514 aa10.69□□□□□ -0.7
PDZRN4-204ENST00000548316 CCNB3Q8WWL7 1395 aa10.69□□□□□ -0.7
PDZRN4-204ENST00000548316 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
PDZRN4-204ENST00000548316 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
PDZRN4-204ENST00000548316 APLP2Q06481 763 aa10.68□□□□□ -0.7
PDZRN4-204ENST00000548316 NESP48681 1621 aa10.67□□□□□ -0.7
PDZRN4-204ENST00000548316 FYCO1Q9BQS8 1478 aa10.67□□□□□ -0.7
PDZRN4-204ENST00000548316 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
PDZRN4-204ENST00000548316 SNAPC4Q5SXM2 1469 aa10.65□□□□□ -0.71
PDZRN4-204ENST00000548316 TARBP1Q13395 1621 aaKnown RBP10.64□□□□□ -0.71
PDZRN4-204ENST00000548316 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
PDZRN4-204ENST00000548316 CASKIN1Q8WXD9 1431 aa10.64□□□□□ -0.71
PDZRN4-204ENST00000548316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDZRN4-204ENST00000548316 PHLDB1Q86UU1 1377 aa10.62□□□□□ -0.71
PDZRN4-204ENST00000548316 THOC2Q8NI27 1593 aaKnown RBP10.62□□□□□ -0.71
PDZRN4-204ENST00000548316 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
PDZRN4-204ENST00000548316 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
PDZRN4-204ENST00000548316 MIER1Q8N108 512 aa10.58□□□□□ -0.72
PDZRN4-204ENST00000548316 ARHGEF11O15085 1522 aa10.58□□□□□ -0.72
PDZRN4-204ENST00000548316 GRIN2BQ13224 1484 aa10.58□□□□□ -0.72
PDZRN4-204ENST00000548316 RAB3GAP2Q9H2M9 1393 aa10.58□□□□□ -0.72
PDZRN4-204ENST00000548316 FHOD3Q2V2M9 1422 aa10.57□□□□□ -0.72
PDZRN4-204ENST00000548316 SETD5Q9C0A6 1442 aa10.56□□□□□ -0.72
PDZRN4-204ENST00000548316 CENPBP07199 599 aaPredicted RBP10.56□□□□□ -0.72
PDZRN4-204ENST00000548316 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
PDZRN4-204ENST00000548316 GAPVD1Q14C86 1478 aa10.53□□□□□ -0.72
PDZRN4-204ENST00000548316 ADAMTS12P58397 1594 aa10.53□□□□□ -0.72
PDZRN4-204ENST00000548316 FMN1Q68DA7 1419 aa10.52□□□□□ -0.73
PDZRN4-204ENST00000548316 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.73
PDZRN4-204ENST00000548316 SUPT6HQ7KZ85 1726 aaKnown RBP10.51□□□□□ -0.73
PDZRN4-204ENST00000548316 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
PDZRN4-204ENST00000548316 PTPN23Q9H3S7 1636 aa10.51□□□□□ -0.73
PDZRN4-204ENST00000548316 UGGT2Q9NYU1 1516 aa10.51□□□□□ -0.73
PDZRN4-204ENST00000548316 FGD6Q6ZV73 1430 aa10.5□□□□□ -0.73
PDZRN4-204ENST00000548316 EHBP1L1Q8N3D4 1523 aa10.5□□□□□ -0.73
PDZRN4-204ENST00000548316 GCC2Q8IWJ2 1684 aa10.5□□□□□ -0.73
PDZRN4-204ENST00000548316 PDS5BQ9NTI5 1447 aa10.5□□□□□ -0.73
PDZRN4-204ENST00000548316 KDM5BQ9UGL1 1544 aa10.49□□□□□ -0.73
PDZRN4-204ENST00000548316 TCOF1Q13428 1488 aaKnown RBP10.49□□□□□ -0.73
PDZRN4-204ENST00000548316 PTPRKQ15262 1439 aa10.48□□□□□ -0.73
PDZRN4-204ENST00000548316 WDR62O43379 1518 aa10.46□□□□□ -0.74
PDZRN4-204ENST00000548316 HECW1Q76N89 1606 aa10.45□□□□□ -0.74
PDZRN4-204ENST00000548316 NCOA2Q15596 1464 aa10.45□□□□□ -0.74
PDZRN4-204ENST00000548316 HFM1A2PYH4 1435 aa10.45□□□□□ -0.74
PDZRN4-204ENST00000548316 IQGAP2Q13576 1575 aa10.45□□□□□ -0.74
PDZRN4-204ENST00000548316 TDRD9Q8NDG6 1382 aaKnown RBP10.44□□□□□ -0.74
PDZRN4-204ENST00000548316 CCDC18Q5T9S5 1454 aa10.44□□□□□ -0.74
PDZRN4-204ENST00000548316 MYOM3Q5VTT5 1437 aa10.44□□□□□ -0.74
PDZRN4-204ENST00000548316 DNAJC5BQ9UF47 199 aa10.42□□□□□ -0.74
PDZRN4-204ENST00000548316 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
PDZRN4-204ENST00000548316 DENND4BO75064 1496 aaPredicted RBP10.42□□□□□ -0.74
PDZRN4-204ENST00000548316 MRC2Q9UBG0 1479 aa10.42□□□□□ -0.74
PDZRN4-204ENST00000548316 AKNAQ7Z591 1439 aa10.42□□□□□ -0.74
PDZRN4-204ENST00000548316 NAIPQ13075 1403 aa10.41□□□□□ -0.74
PDZRN4-204ENST00000548316 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
PDZRN4-204ENST00000548316 UACAQ9BZF9 1416 aa10.4□□□□□ -0.74
PDZRN4-204ENST00000548316 KDM6BO15054 1643 aa10.39□□□□□ -0.75
PDZRN4-204ENST00000548316 EPRSP07814 1512 aaKnown RBP10.38□□□□□ -0.75
PDZRN4-204ENST00000548316 KIAA0556O60303 1618 aa10.38□□□□□ -0.75
PDZRN4-204ENST00000548316 DISP1Q96F81 1524 aa10.36□□□□□ -0.75
PDZRN4-204ENST00000548316 ITGAEP38570 1179 aa10.36□□□□□ -0.75
PDZRN4-204ENST00000548316 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
PDZRN4-204ENST00000548316 PPP1R15AO75807 674 aaPredicted RBP10.35□□□□□ -0.75
PDZRN4-204ENST00000548316 SIN3AQ96ST3 1273 aa10.35□□□□□ -0.75
PDZRN4-204ENST00000548316 ADCY10Q96PN6 1610 aa10.35□□□□□ -0.75
PDZRN4-204ENST00000548316 MTUS2Q5JR59 1369 aa10.35□□□□□ -0.75
PDZRN4-204ENST00000548316 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
PDZRN4-204ENST00000548316 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
PDZRN4-204ENST00000548316 DNMT1P26358 1616 aaKnown RBP10.34□□□□□ -0.75
PDZRN4-204ENST00000548316 EIF4G3O43432 1585 aaKnown RBP10.34□□□□□ -0.75
PDZRN4-204ENST00000548316 MIA2Q96PC5 1412 aa10.34□□□□□ -0.75
PDZRN4-204ENST00000548316 CDK13Q14004 1512 aaKnown RBP10.34□□□□□ -0.75
PDZRN4-204ENST00000548316 RAPGEF6Q8TEU7 1601 aa10.33□□□□□ -0.76
PDZRN4-204ENST00000548316 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
PDZRN4-204ENST00000548316 CROCC2H7BZ55 1655 aa10.32□□□□□ -0.76
PDZRN4-204ENST00000548316 KIAA0586Q9BVV6 1533 aa10.32□□□□□ -0.76
PDZRN4-204ENST00000548316 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
PDZRN4-204ENST00000548316 ADGBQ8N7X0 1667 aa10.3□□□□□ -0.76
PDZRN4-204ENST00000548316 NUP153P49790 1475 aaKnown RBP10.3□□□□□ -0.76
PDZRN4-204ENST00000548316 CEP170Q5SW79 1584 aa10.29□□□□□ -0.76
PDZRN4-204ENST00000548316 GRIN2AQ12879 1464 aa10.29□□□□□ -0.76
PDZRN4-204ENST00000548316 AEBP2Q6ZN18 517 aaPredicted RBP10.28□□□□□ -0.76
PDZRN4-204ENST00000548316 ROCK1Q13464 1354 aa10.27□□□□□ -0.76
PDZRN4-204ENST00000548316 ITSN2Q9NZM3 1697 aa10.27□□□□□ -0.77
PDZRN4-204ENST00000548316 MAGI1Q96QZ7 1491 aaPredicted RBP10.25□□□□□ -0.77
PDZRN4-204ENST00000548316 KCNH8Q96L42 1107 aa10.25□□□□□ -0.77
PDZRN4-204ENST00000548316 DAPK1P53355 1430 aa10.25□□□□□ -0.77
PDZRN4-204ENST00000548316 ABCC5O15440 1437 aa10.24□□□□□ -0.77
PDZRN4-204ENST00000548316 TEX14Q8IWB6 1497 aa10.24□□□□□ -0.77
PDZRN4-204ENST00000548316 ATP1B4Q9UN42 357 aaPredicted RBP10.23□□□□□ -0.77
PDZRN4-204ENST00000548316 SUPT16HQ9Y5B9 1047 aaKnown RBP10.23□□□□□ -0.77
PDZRN4-204ENST00000548316 CCER2I3L3R5 266 aa10.23□□□□□ -0.77
PDZRN4-204ENST00000548316 CDC42BPAQ5VT25 1732 aa10.23□□□□□ -0.77
PDZRN4-204ENST00000548316 ADGRL2O95490 1459 aa10.23□□□□□ -0.77
PDZRN4-204ENST00000548316 NUP160Q12769 1436 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms