RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 RUSC2Q8N2Y8 1516 aa35.61■■■■□ 3.29
GATC-202ENST00000548171 CUL7Q14999 1698 aa35.4■■■■□ 3.26
GATC-202ENST00000548171 MAPKBP1O60336 1514 aa35.4■■■■□ 3.26
GATC-202ENST00000548171 NPM1P06748 294 aaKnown RBP eCLIP35.39■■■■□ 3.26
GATC-202ENST00000548171 KIAA0586Q9BVV6 1533 aa35.38■■■■□ 3.25
GATC-202ENST00000548171 ABCC10Q5T3U5 1492 aa35.37■■■■□ 3.25
GATC-202ENST00000548171 KIF27Q86VH2 1401 aa35.36■■■■□ 3.25
GATC-202ENST00000548171 ADCY10Q96PN6 1610 aa35.35■■■■□ 3.25
GATC-202ENST00000548171 IGF1RP08069 1367 aa35.34■■■■□ 3.25
GATC-202ENST00000548171 FAM69CQ0P6D2 419 aa35.3■■■■□ 3.24
GATC-202ENST00000548171 DIP2BQ9P265 1576 aa35.3■■■■□ 3.24
GATC-202ENST00000548171 CARMIL1Q5VZK9 1371 aa35.11■■■■□ 3.21
GATC-202ENST00000548171 PTPRGP23470 1445 aa35.08■■■■□ 3.21
GATC-202ENST00000548171 TSPOAP1O95153 1857 aa35.08■■■■□ 3.21
GATC-202ENST00000548171 KDM6BO15054 1643 aa35.08■■■■□ 3.21
GATC-202ENST00000548171 CARMIL2Q6F5E8 1435 aa35.06■■■■□ 3.2
GATC-202ENST00000548171 IQGAP2Q13576 1575 aa35.02■■■■□ 3.2
GATC-202ENST00000548171 TNIKQ9UKE5 1360 aa35■■■■□ 3.19
GATC-202ENST00000548171 ABCC2Q92887 1545 aa34.98■■■■□ 3.19
GATC-202ENST00000548171 UHRF1BP1LA0JNW5 1464 aa34.9■■■■□ 3.18
GATC-202ENST00000548171 TTBK1Q5TCY1 1321 aaPredicted RBP34.89■■■■□ 3.18
GATC-202ENST00000548171 PLB1Q6P1J6 1458 aa34.88■■■■□ 3.17
GATC-202ENST00000548171 GLI2P10070 1586 aa34.87■■■■□ 3.17
GATC-202ENST00000548171 ASXL2Q76L83 1435 aa34.86■■■■□ 3.17
GATC-202ENST00000548171 DISP1Q96F81 1524 aa34.83■■■■□ 3.17
GATC-202ENST00000548171 UACAQ9BZF9 1416 aa34.82■■■■□ 3.17
GATC-202ENST00000548171 PPRC1Q5VV67 1664 aaKnown RBP34.79■■■■□ 3.16
GATC-202ENST00000548171 RAPGEF2Q9Y4G8 1499 aa34.78■■■■□ 3.16
GATC-202ENST00000548171 UGGT2Q9NYU1 1516 aa34.77■■■■□ 3.16
GATC-202ENST00000548171 KDM4FA0A1W2PPD8 638 aa34.77■■■■□ 3.16
GATC-202ENST00000548171 KDM5BQ9UGL1 1544 aa34.73■■■■□ 3.15
GATC-202ENST00000548171 KIAA0556O60303 1618 aa34.69■■■■□ 3.14
GATC-202ENST00000548171 MAP3K4Q9Y6R4 1608 aa34.67■■■■□ 3.14
GATC-202ENST00000548171 ZCCHC11Q5TAX3 1644 aaKnown RBP34.66■■■■□ 3.14
GATC-202ENST00000548171 EPRSP07814 1512 aaKnown RBP34.65■■■■□ 3.14
GATC-202ENST00000548171 CTTNBP2Q8WZ74 1663 aa34.6■■■■□ 3.13
GATC-202ENST00000548171 TEX14Q8IWB6 1497 aa34.59■■■■□ 3.13
GATC-202ENST00000548171 COL17A1Q9UMD9 1497 aaPredicted RBP34.51■■■■□ 3.11
GATC-202ENST00000548171 GOLGA3Q08378 1498 aa34.49■■■■□ 3.11
GATC-202ENST00000548171 WDR7Q9Y4E6 1490 aa34.49■■■■□ 3.11
GATC-202ENST00000548171 ADGRL1O94910 1474 aa34.48■■■■□ 3.11
GATC-202ENST00000548171 CFAP43Q8NDM7 1665 aa34.39■■■■□ 3.1
GATC-202ENST00000548171 ABCA8O94911 1581 aa34.39■■■■□ 3.1
GATC-202ENST00000548171 PRXQ9BXM0 1461 aa34.33■■■■□ 3.09
GATC-202ENST00000548171 MAGI3Q5TCQ9 1506 aa34.32■■■■□ 3.08
GATC-202ENST00000548171 CD109Q6YHK3 1445 aa34.3■■■■□ 3.08
GATC-202ENST00000548171 KCNH8Q96L42 1107 aa34.23■■■■□ 3.07
GATC-202ENST00000548171 FAM9AQ8IZU1 332 aaPredicted RBP34.2■■■■□ 3.07
GATC-202ENST00000548171 HECW2Q9P2P5 1572 aa34.12■■■■□ 3.05
GATC-202ENST00000548171 ARAP3Q8WWN8 1544 aa34.09■■■■□ 3.05
GATC-202ENST00000548171 ATP10BO94823 1461 aa34.06■■■■□ 3.04
GATC-202ENST00000548171 SAMD9Q5K651 1589 aa34.04■■■■□ 3.04
GATC-202ENST00000548171 ILDR1Q86SU0 546 aaPredicted RBP34.04■■■■□ 3.04
GATC-202ENST00000548171 ABCA9Q8IUA7 1624 aa34.04■■■■□ 3.04
GATC-202ENST00000548171 KIF21BO75037 1637 aa34.03■■■■□ 3.04
GATC-202ENST00000548171 PHLDB1Q86UU1 1377 aa34■■■■□ 3.03
GATC-202ENST00000548171 P3H3Q8IVL6 736 aa34■■■■□ 3.03
GATC-202ENST00000548171 RAPGEF6Q8TEU7 1601 aa33.97■■■■□ 3.03
GATC-202ENST00000548171 ARID3CA6NKF2 412 aa33.97■■■■□ 3.03
GATC-202ENST00000548171 CSRNP3Q8WYN3 585 aa33.95■■■■□ 3.03
GATC-202ENST00000548171 NEO1Q92859 1461 aa33.88■■■■□ 3.01
GATC-202ENST00000548171 EEA1Q15075 1411 aa33.83■■■■□ 3.01
GATC-202ENST00000548171 NUP153P49790 1475 aaKnown RBP33.81■■■■□ 3
GATC-202ENST00000548171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.8■■■■□ 3
GATC-202ENST00000548171 HNRNPUL2Q1KMD3 747 aaKnown RBP33.8■■■■□ 3
GATC-202ENST00000548171 ADAMTSL3P82987 1691 aa33.8■■■■□ 3
GATC-202ENST00000548171 RAPGEF3O95398 923 aa33.76■■■□□ 2.99
GATC-202ENST00000548171 FRMPD1Q5SYB0 1578 aa33.74■■■□□ 2.99
GATC-202ENST00000548171 PTPRMP28827 1452 aa33.72■■■□□ 2.99
GATC-202ENST00000548171 FHOD3Q2V2M9 1422 aa33.7■■■□□ 2.99
GATC-202ENST00000548171 BCORL1Q5H9F3 1711 aa33.7■■■□□ 2.98
GATC-202ENST00000548171 EFCAB5A4FU69 1503 aa33.66■■■□□ 2.98
GATC-202ENST00000548171 PLEKHD1A6NEE1 506 aa33.66■■■□□ 2.98
GATC-202ENST00000548171 CFAP74Q9C0B2 1584 aa33.65■■■□□ 2.98
GATC-202ENST00000548171 RANGAP1P46060 587 aaPredicted RBP33.64■■■□□ 2.98
GATC-202ENST00000548171 RICTORQ6R327 1708 aa33.63■■■□□ 2.97
GATC-202ENST00000548171 ARHGEF40Q8TER5 1519 aa33.62■■■□□ 2.97
GATC-202ENST00000548171 MADDQ8WXG6 1647 aa33.61■■■□□ 2.97
GATC-202ENST00000548171 DENND4BO75064 1496 aaPredicted RBP33.6■■■□□ 2.97
GATC-202ENST00000548171 ARID4BQ4LE39 1312 aaPredicted RBP33.58■■■□□ 2.97
GATC-202ENST00000548171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.58■■■□□ 2.97
GATC-202ENST00000548171 FANCAO15360 1455 aa33.57■■■□□ 2.97
GATC-202ENST00000548171 AKNAQ7Z591 1439 aa33.57■■■□□ 2.96
GATC-202ENST00000548171 TTC37Q6PGP7 1564 aa33.53■■■□□ 2.96
GATC-202ENST00000548171 ZMYM4Q5VZL5 1548 aa33.5■■■□□ 2.95
GATC-202ENST00000548171 PCF11O94913 1555 aaKnown RBP33.5■■■□□ 2.95
GATC-202ENST00000548171 RIMS1Q86UR5 1692 aaKnown RBP33.48■■■□□ 2.95
GATC-202ENST00000548171 POGZQ7Z3K3 1410 aa33.45■■■□□ 2.94
GATC-202ENST00000548171 MAGI2Q86UL8 1455 aa33.44■■■□□ 2.94
GATC-202ENST00000548171 LMTK3Q96Q04 1460 aa33.44■■■□□ 2.94
GATC-202ENST00000548171 ZFYVE16Q7Z3T8 1539 aa33.43■■■□□ 2.94
GATC-202ENST00000548171 FBXO41Q8TF61 875 aa33.42■■■□□ 2.94
GATC-202ENST00000548171 CDK13Q14004 1512 aaKnown RBP33.42■■■□□ 2.94
GATC-202ENST00000548171 PLCH2O75038 1416 aa33.36■■■□□ 2.93
GATC-202ENST00000548171 HECW1Q76N89 1606 aa33.35■■■□□ 2.93
GATC-202ENST00000548171 SIGLEC1Q9BZZ2 1709 aa33.35■■■□□ 2.93
GATC-202ENST00000548171 FMN1Q68DA7 1419 aa33.34■■■□□ 2.93
GATC-202ENST00000548171 YEATS2Q9ULM3 1422 aa33.34■■■□□ 2.93
GATC-202ENST00000548171 MYO5CQ9NQX4 1742 aa33.33■■■□□ 2.93
GATC-202ENST00000548171 SCAPERQ9BY12 1400 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms