RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 ADAMTS12P58397 1594 aa15.07■□□□□ 0
SMARCC2-205ENST00000548130 GRIN2AQ12879 1464 aa15.05■□□□□ -0
SMARCC2-205ENST00000548130 RUSC2Q8N2Y8 1516 aa15.02■□□□□ -0
SMARCC2-205ENST00000548130 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
SMARCC2-205ENST00000548130 CLASP1Q7Z460 1538 aa15□□□□□ -0.01
SMARCC2-205ENST00000548130 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
SMARCC2-205ENST00000548130 NUP160Q12769 1436 aa14.98□□□□□ -0.01
SMARCC2-205ENST00000548130 ARHGEF11O15085 1522 aa14.97□□□□□ -0.01
SMARCC2-205ENST00000548130 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
SMARCC2-205ENST00000548130 CEP170Q5SW79 1584 aa14.97□□□□□ -0.01
SMARCC2-205ENST00000548130 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
SMARCC2-205ENST00000548130 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
SMARCC2-205ENST00000548130 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
SMARCC2-205ENST00000548130 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
SMARCC2-205ENST00000548130 CUL7Q14999 1698 aa14.93□□□□□ -0.02
SMARCC2-205ENST00000548130 CYB5RLQ6IPT4 315 aa14.91□□□□□ -0.02
SMARCC2-205ENST00000548130 FAM9AQ8IZU1 332 aaPredicted RBP14.88□□□□□ -0.03
SMARCC2-205ENST00000548130 JPH4Q96JJ6 628 aa14.88□□□□□ -0.03
SMARCC2-205ENST00000548130 ARAP1Q96P48 1450 aa14.88□□□□□ -0.03
SMARCC2-205ENST00000548130 RAPGEF2Q9Y4G8 1499 aa14.87□□□□□ -0.03
SMARCC2-205ENST00000548130 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
SMARCC2-205ENST00000548130 KIAA0586Q9BVV6 1533 aa14.84□□□□□ -0.03
SMARCC2-205ENST00000548130 ERCC6L2Q5T890 1561 aa14.84□□□□□ -0.03
SMARCC2-205ENST00000548130 PRG4Q92954 1404 aaPredicted RBP14.83□□□□□ -0.03
SMARCC2-205ENST00000548130 PRXQ9BXM0 1461 aa14.82□□□□□ -0.04
SMARCC2-205ENST00000548130 EEA1Q15075 1411 aa14.82□□□□□ -0.04
SMARCC2-205ENST00000548130 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
SMARCC2-205ENST00000548130 SHROOM2Q13796 1616 aa14.81□□□□□ -0.04
SMARCC2-205ENST00000548130 IQGAP2Q13576 1575 aa14.73□□□□□ -0.05
SMARCC2-205ENST00000548130 TTBK1Q5TCY1 1321 aaPredicted RBP14.72□□□□□ -0.05
SMARCC2-205ENST00000548130 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
SMARCC2-205ENST00000548130 CARMIL2Q6F5E8 1435 aa14.69□□□□□ -0.06
SMARCC2-205ENST00000548130 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
SMARCC2-205ENST00000548130 PTPRGP23470 1445 aa14.66□□□□□ -0.06
SMARCC2-205ENST00000548130 DISP1Q96F81 1524 aa14.66□□□□□ -0.06
SMARCC2-205ENST00000548130 UGGT2Q9NYU1 1516 aa14.66□□□□□ -0.06
SMARCC2-205ENST00000548130 TNIKQ9UKE5 1360 aa14.66□□□□□ -0.06
SMARCC2-205ENST00000548130 TRHP20396 242 aaPredicted RBP14.64□□□□□ -0.07
SMARCC2-205ENST00000548130 RANGAP1P46060 587 aaPredicted RBP14.64□□□□□ -0.07
SMARCC2-205ENST00000548130 KIF21BO75037 1637 aa14.63□□□□□ -0.07
SMARCC2-205ENST00000548130 CTTNBP2Q8WZ74 1663 aa14.63□□□□□ -0.07
SMARCC2-205ENST00000548130 UBTFP17480 764 aaKnown RBP14.62□□□□□ -0.07
SMARCC2-205ENST00000548130 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
SMARCC2-205ENST00000548130 KIAA0556O60303 1618 aa14.6□□□□□ -0.07
SMARCC2-205ENST00000548130 GOLGA3Q08378 1498 aa14.6□□□□□ -0.07
SMARCC2-205ENST00000548130 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMARCC2-205ENST00000548130 KCNA4P22459 653 aa14.55□□□□□ -0.08
SMARCC2-205ENST00000548130 UACAQ9BZF9 1416 aa14.55□□□□□ -0.08
SMARCC2-205ENST00000548130 ADCY10Q96PN6 1610 aa14.55□□□□□ -0.08
SMARCC2-205ENST00000548130 PLB1Q6P1J6 1458 aa14.5□□□□□ -0.09
SMARCC2-205ENST00000548130 FHOD3Q2V2M9 1422 aa14.5□□□□□ -0.09
SMARCC2-205ENST00000548130 UHRF1BP1LA0JNW5 1464 aa14.5□□□□□ -0.09
SMARCC2-205ENST00000548130 SAMD9Q5K651 1589 aa14.49□□□□□ -0.09
SMARCC2-205ENST00000548130 ABCC2Q92887 1545 aa14.49□□□□□ -0.09
SMARCC2-205ENST00000548130 ARID3CA6NKF2 412 aa14.47□□□□□ -0.09
SMARCC2-205ENST00000548130 ABCA8O94911 1581 aa14.45□□□□□ -0.1
SMARCC2-205ENST00000548130 FAM69CQ0P6D2 419 aa14.44□□□□□ -0.1
SMARCC2-205ENST00000548130 EFCAB5A4FU69 1503 aa14.44□□□□□ -0.1
SMARCC2-205ENST00000548130 MAPKBP1O60336 1514 aa14.44□□□□□ -0.1
SMARCC2-205ENST00000548130 KDM5BQ9UGL1 1544 aa14.43□□□□□ -0.1
SMARCC2-205ENST00000548130 ARHGAP35Q9NRY4 1499 aa14.43□□□□□ -0.1
SMARCC2-205ENST00000548130 ASXL2Q76L83 1435 aa14.42□□□□□ -0.1
SMARCC2-205ENST00000548130 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
SMARCC2-205ENST00000548130 ABCC10Q5T3U5 1492 aa14.41□□□□□ -0.1
SMARCC2-205ENST00000548130 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
SMARCC2-205ENST00000548130 ZCCHC11Q5TAX3 1644 aaKnown RBP14.37□□□□□ -0.11
SMARCC2-205ENST00000548130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
SMARCC2-205ENST00000548130 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
SMARCC2-205ENST00000548130 ATP10BO94823 1461 aa14.37□□□□□ -0.11
SMARCC2-205ENST00000548130 CLIP1P30622 1438 aa14.36□□□□□ -0.11
SMARCC2-205ENST00000548130 ATP1B4Q9UN42 357 aaPredicted RBP14.36□□□□□ -0.11
SMARCC2-205ENST00000548130 RAPGEF6Q8TEU7 1601 aa14.36□□□□□ -0.11
SMARCC2-205ENST00000548130 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
SMARCC2-205ENST00000548130 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
SMARCC2-205ENST00000548130 NUP153P49790 1475 aaKnown RBP14.35□□□□□ -0.11
SMARCC2-205ENST00000548130 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
SMARCC2-205ENST00000548130 FMN1Q68DA7 1419 aa14.33□□□□□ -0.11
SMARCC2-205ENST00000548130 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.12
SMARCC2-205ENST00000548130 KIF13AQ9H1H9 1805 aa14.32□□□□□ -0.12
SMARCC2-205ENST00000548130 EPRSP07814 1512 aaKnown RBP14.32□□□□□ -0.12
SMARCC2-205ENST00000548130 CEP162Q5TB80 1403 aa14.3□□□□□ -0.12
SMARCC2-205ENST00000548130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.123e-8■■□□□ 13.5
SMARCC2-205ENST00000548130 GLI2P10070 1586 aa14.27□□□□□ -0.12
SMARCC2-205ENST00000548130 PLEKHD1A6NEE1 506 aa14.27□□□□□ -0.13
SMARCC2-205ENST00000548130 CDK13Q14004 1512 aaKnown RBP14.26□□□□□ -0.13
SMARCC2-205ENST00000548130 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
SMARCC2-205ENST00000548130 CASKIN1Q8WXD9 1431 aa14.24□□□□□ -0.13
SMARCC2-205ENST00000548130 HECW1Q76N89 1606 aa14.23□□□□□ -0.13
SMARCC2-205ENST00000548130 CD109Q6YHK3 1445 aa14.23□□□□□ -0.13
SMARCC2-205ENST00000548130 TSPOAP1O95153 1857 aa14.23□□□□□ -0.13
SMARCC2-205ENST00000548130 PCF11O94913 1555 aaKnown RBP14.22□□□□□ -0.13
SMARCC2-205ENST00000548130 MAP3K4Q9Y6R4 1608 aa14.19□□□□□ -0.14
SMARCC2-205ENST00000548130 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
SMARCC2-205ENST00000548130 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
SMARCC2-205ENST00000548130 PPRC1Q5VV67 1664 aaKnown RBP14.17□□□□□ -0.14
SMARCC2-205ENST00000548130 CCDC18Q5T9S5 1454 aa14.16□□□□□ -0.14
SMARCC2-205ENST00000548130 TEX14Q8IWB6 1497 aa14.16□□□□□ -0.14
SMARCC2-205ENST00000548130 MAGI3Q5TCQ9 1506 aa14.15□□□□□ -0.14
SMARCC2-205ENST00000548130 TROQ12816 1431 aaPredicted RBP14.15□□□□□ -0.14
SMARCC2-205ENST00000548130 CFAP43Q8NDM7 1665 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms