RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
SMPDL3B-205ENST00000548116 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
SMPDL3B-205ENST00000548116 GRIN2AQ12879 1464 aa21.32■■□□□ 1
SMPDL3B-205ENST00000548116 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
SMPDL3B-205ENST00000548116 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
SMPDL3B-205ENST00000548116 SYNJ2O15056 1496 aa21.3■■□□□ 1
SMPDL3B-205ENST00000548116 EFCAB5A4FU69 1503 aa21.3■■□□□ 1
SMPDL3B-205ENST00000548116 SAMD9Q5K651 1589 aa21.25■□□□□ 0.99
SMPDL3B-205ENST00000548116 IQGAP2Q13576 1575 aa21.25■□□□□ 0.99
SMPDL3B-205ENST00000548116 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
SMPDL3B-205ENST00000548116 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
SMPDL3B-205ENST00000548116 FHOD3Q2V2M9 1422 aa21.23■□□□□ 0.99
SMPDL3B-205ENST00000548116 KIAA0586Q9BVV6 1533 aa21.21■□□□□ 0.99
SMPDL3B-205ENST00000548116 CEP170Q5SW79 1584 aa21.2■□□□□ 0.98
SMPDL3B-205ENST00000548116 NUP160Q12769 1436 aa21.17■□□□□ 0.98
SMPDL3B-205ENST00000548116 UGGT2Q9NYU1 1516 aa21.16■□□□□ 0.98
SMPDL3B-205ENST00000548116 FBLN2P98095 1184 aa21.16■□□□□ 0.98
SMPDL3B-205ENST00000548116 APLP2Q06481 763 aa21.16■□□□□ 0.98
SMPDL3B-205ENST00000548116 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
SMPDL3B-205ENST00000548116 PCF11O94913 1555 aaKnown RBP21.13■□□□□ 0.97
SMPDL3B-205ENST00000548116 FMN1Q68DA7 1419 aa21.1■□□□□ 0.97
SMPDL3B-205ENST00000548116 CHD1O14646 1710 aa21.09■□□□□ 0.97
SMPDL3B-205ENST00000548116 CASKIN1Q8WXD9 1431 aa21.09■□□□□ 0.97
SMPDL3B-205ENST00000548116 DISP1Q96F81 1524 aa21.08■□□□□ 0.96
SMPDL3B-205ENST00000548116 MAP3K1Q13233 1512 aa21.07■□□□□ 0.96
SMPDL3B-205ENST00000548116 FYCO1Q9BQS8 1478 aa21.07■□□□□ 0.96
SMPDL3B-205ENST00000548116 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
SMPDL3B-205ENST00000548116 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
SMPDL3B-205ENST00000548116 KIAA0556O60303 1618 aa21.05■□□□□ 0.96
SMPDL3B-205ENST00000548116 CFAP43Q8NDM7 1665 aa21■□□□□ 0.95
SMPDL3B-205ENST00000548116 JPH4Q96JJ6 628 aa20.99■□□□□ 0.95
SMPDL3B-205ENST00000548116 LRRIQ1Q96JM4 1722 aa20.96■□□□□ 0.95
SMPDL3B-205ENST00000548116 ATP1B4Q9UN42 357 aaPredicted RBP20.96■□□□□ 0.95
SMPDL3B-205ENST00000548116 LRRC9Q6ZRR7 1453 aa20.95■□□□□ 0.94
SMPDL3B-205ENST00000548116 CARMIL2Q6F5E8 1435 aa20.91■□□□□ 0.94
SMPDL3B-205ENST00000548116 HECW1Q76N89 1606 aa20.89■□□□□ 0.93
SMPDL3B-205ENST00000548116 SHROOM2Q13796 1616 aa20.89■□□□□ 0.93
SMPDL3B-205ENST00000548116 PRG4Q92954 1404 aaPredicted RBP20.86■□□□□ 0.93
SMPDL3B-205ENST00000548116 CLASP1Q7Z460 1538 aa20.86■□□□□ 0.93
SMPDL3B-205ENST00000548116 CCDC18Q5T9S5 1454 aa20.84■□□□□ 0.93
SMPDL3B-205ENST00000548116 RAPGEF6Q8TEU7 1601 aa20.83■□□□□ 0.93
SMPDL3B-205ENST00000548116 EPRSP07814 1512 aaKnown RBP20.83■□□□□ 0.93
SMPDL3B-205ENST00000548116 RRBP1Q9P2E9 1410 aaKnown RBP20.81■□□□□ 0.92
SMPDL3B-205ENST00000548116 NUP153P49790 1475 aaKnown RBP20.81■□□□□ 0.92
SMPDL3B-205ENST00000548116 PLB1Q6P1J6 1458 aa20.79■□□□□ 0.92
SMPDL3B-205ENST00000548116 CDK13Q14004 1512 aaKnown RBP20.79■□□□□ 0.92
SMPDL3B-205ENST00000548116 PHLDB1Q86UU1 1377 aa20.78■□□□□ 0.92
SMPDL3B-205ENST00000548116 MAGI3Q5TCQ9 1506 aa20.78■□□□□ 0.92
SMPDL3B-205ENST00000548116 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.92
SMPDL3B-205ENST00000548116 ERCC6L2Q5T890 1561 aa20.76■□□□□ 0.91
SMPDL3B-205ENST00000548116 ABCA8O94911 1581 aa20.76■□□□□ 0.91
SMPDL3B-205ENST00000548116 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
SMPDL3B-205ENST00000548116 CCNB3Q8WWL7 1395 aa20.73■□□□□ 0.91
SMPDL3B-205ENST00000548116 PTPRGP23470 1445 aa20.72■□□□□ 0.91
SMPDL3B-205ENST00000548116 ARID3CA6NKF2 412 aa20.72■□□□□ 0.91
SMPDL3B-205ENST00000548116 HRCP23327 699 aa20.7■□□□□ 0.9
SMPDL3B-205ENST00000548116 SUPT6HQ7KZ85 1726 aaKnown RBP20.69■□□□□ 0.9
SMPDL3B-205ENST00000548116 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
SMPDL3B-205ENST00000548116 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
SMPDL3B-205ENST00000548116 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
SMPDL3B-205ENST00000548116 ATP10BO94823 1461 aa20.62■□□□□ 0.89
SMPDL3B-205ENST00000548116 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
SMPDL3B-205ENST00000548116 FGD6Q6ZV73 1430 aa20.61■□□□□ 0.89
SMPDL3B-205ENST00000548116 UACAQ9BZF9 1416 aa20.61■□□□□ 0.89
SMPDL3B-205ENST00000548116 MYOM3Q5VTT5 1437 aa20.61■□□□□ 0.89
SMPDL3B-205ENST00000548116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
SMPDL3B-205ENST00000548116 CDK11AQ9UQ88 783 aaPredicted RBP20.59■□□□□ 0.89
SMPDL3B-205ENST00000548116 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.89
SMPDL3B-205ENST00000548116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPDL3B-205ENST00000548116 ABCC2Q92887 1545 aa20.56■□□□□ 0.88
SMPDL3B-205ENST00000548116 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
SMPDL3B-205ENST00000548116 ADCY10Q96PN6 1610 aa20.53■□□□□ 0.88
SMPDL3B-205ENST00000548116 ITGAEP38570 1179 aa20.51■□□□□ 0.87
SMPDL3B-205ENST00000548116 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
SMPDL3B-205ENST00000548116 KIF14Q15058 1648 aa20.5■□□□□ 0.87
SMPDL3B-205ENST00000548116 PTPN23Q9H3S7 1636 aa20.5■□□□□ 0.87
SMPDL3B-205ENST00000548116 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
SMPDL3B-205ENST00000548116 TCOF1Q13428 1488 aaKnown RBP20.49■□□□□ 0.87
SMPDL3B-205ENST00000548116 MIA2Q96PC5 1412 aa20.48■□□□□ 0.87
SMPDL3B-205ENST00000548116 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
SMPDL3B-205ENST00000548116 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
SMPDL3B-205ENST00000548116 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
SMPDL3B-205ENST00000548116 GPATCH8Q9UKJ3 1502 aaKnown RBP20.42■□□□□ 0.86
SMPDL3B-205ENST00000548116 ZCCHC11Q5TAX3 1644 aaKnown RBP20.42■□□□□ 0.86
SMPDL3B-205ENST00000548116 PTPRKQ15262 1439 aa20.42■□□□□ 0.86
SMPDL3B-205ENST00000548116 ZEB1P37275 1124 aaPredicted RBP20.41■□□□□ 0.86
SMPDL3B-205ENST00000548116 ITSN2Q9NZM3 1697 aa20.39■□□□□ 0.86
SMPDL3B-205ENST00000548116 CDC42BPAQ5VT25 1732 aa20.37■□□□□ 0.85
SMPDL3B-205ENST00000548116 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
SMPDL3B-205ENST00000548116 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
SMPDL3B-205ENST00000548116 ZNF644Q9H582 1327 aaPredicted RBP20.34■□□□□ 0.85
SMPDL3B-205ENST00000548116 CFDP1Q9UEE9 299 aaPredicted RBP20.33■□□□□ 0.84
SMPDL3B-205ENST00000548116 CAMSAP2Q08AD1 1489 aa20.31■□□□□ 0.84
SMPDL3B-205ENST00000548116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.3■□□□□ 0.84
SMPDL3B-205ENST00000548116 DHX57Q6P158 1386 aaKnown RBP20.3■□□□□ 0.84
SMPDL3B-205ENST00000548116 TTC37Q6PGP7 1564 aa20.29■□□□□ 0.84
SMPDL3B-205ENST00000548116 DNMT1P26358 1616 aaKnown RBP20.29■□□□□ 0.84
SMPDL3B-205ENST00000548116 HFM1A2PYH4 1435 aa20.29■□□□□ 0.84
SMPDL3B-205ENST00000548116 DAPK1P53355 1430 aa20.28■□□□□ 0.84
SMPDL3B-205ENST00000548116 ABCC5O15440 1437 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms