RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
RACGAP1-209ENST00000547905 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
RACGAP1-209ENST00000547905 ADGRL1O94910 1474 aa17.26■□□□□ 0.35
RACGAP1-209ENST00000547905 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
RACGAP1-209ENST00000547905 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
RACGAP1-209ENST00000547905 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
RACGAP1-209ENST00000547905 GLI2P10070 1586 aa17.15■□□□□ 0.34
RACGAP1-209ENST00000547905 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.34
RACGAP1-209ENST00000547905 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
RACGAP1-209ENST00000547905 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
RACGAP1-209ENST00000547905 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.33
RACGAP1-209ENST00000547905 PLB1Q6P1J6 1458 aa17.06■□□□□ 0.32
RACGAP1-209ENST00000547905 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
RACGAP1-209ENST00000547905 TSPOAP1O95153 1857 aa17.05■□□□□ 0.32
RACGAP1-209ENST00000547905 TEX14Q8IWB6 1497 aa17.03■□□□□ 0.32
RACGAP1-209ENST00000547905 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.32
RACGAP1-209ENST00000547905 PPRC1Q5VV67 1664 aaKnown RBP17■□□□□ 0.31
RACGAP1-209ENST00000547905 SOCS7O14512 581 aa16.99■□□□□ 0.31
RACGAP1-209ENST00000547905 ABCC2Q92887 1545 aa16.95■□□□□ 0.3
RACGAP1-209ENST00000547905 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
RACGAP1-209ENST00000547905 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
RACGAP1-209ENST00000547905 ASXL2Q76L83 1435 aa16.9■□□□□ 0.3
RACGAP1-209ENST00000547905 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
RACGAP1-209ENST00000547905 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
RACGAP1-209ENST00000547905 COL17A1Q9UMD9 1497 aaPredicted RBP16.89■□□□□ 0.29
RACGAP1-209ENST00000547905 PTPRGP23470 1445 aa16.88■□□□□ 0.29
RACGAP1-209ENST00000547905 EPRSP07814 1512 aaKnown RBP16.84■□□□□ 0.29
RACGAP1-209ENST00000547905 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.28
RACGAP1-209ENST00000547905 CARMIL2Q6F5E8 1435 aa16.82■□□□□ 0.28
RACGAP1-209ENST00000547905 KDM5BQ9UGL1 1544 aa16.78■□□□□ 0.28
RACGAP1-209ENST00000547905 MAGI3Q5TCQ9 1506 aa16.77■□□□□ 0.27
RACGAP1-209ENST00000547905 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
RACGAP1-209ENST00000547905 CUL7Q14999 1698 aa16.72■□□□□ 0.27
RACGAP1-209ENST00000547905 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
RACGAP1-209ENST00000547905 PTPRMP28827 1452 aa16.72■□□□□ 0.27
RACGAP1-209ENST00000547905 DISP3Q9P2K9 1392 aa16.72■□□□□ 0.27
RACGAP1-209ENST00000547905 ADAMTSL3P82987 1691 aa16.71■□□□□ 0.27
RACGAP1-209ENST00000547905 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
RACGAP1-209ENST00000547905 ILDR2Q71H61 639 aa16.7■□□□□ 0.26
RACGAP1-209ENST00000547905 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
RACGAP1-209ENST00000547905 CFAP43Q8NDM7 1665 aa16.68■□□□□ 0.26
RACGAP1-209ENST00000547905 ARAP3Q8WWN8 1544 aa16.66■□□□□ 0.26
RACGAP1-209ENST00000547905 WDR7Q9Y4E6 1490 aa16.65■□□□□ 0.26
RACGAP1-209ENST00000547905 KIF21BO75037 1637 aa16.62■□□□□ 0.25
RACGAP1-209ENST00000547905 ZCCHC11Q5TAX3 1644 aaKnown RBP16.62■□□□□ 0.25
RACGAP1-209ENST00000547905 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
RACGAP1-209ENST00000547905 IGF1RP08069 1367 aa16.6■□□□□ 0.25
RACGAP1-209ENST00000547905 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
RACGAP1-209ENST00000547905 IQGAP2Q13576 1575 aa16.57■□□□□ 0.24
RACGAP1-209ENST00000547905 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
RACGAP1-209ENST00000547905 BCORL1Q5H9F3 1711 aa16.55■□□□□ 0.24
RACGAP1-209ENST00000547905 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
RACGAP1-209ENST00000547905 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.24
RACGAP1-209ENST00000547905 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
RACGAP1-209ENST00000547905 IQSEC2Q5JU85 1478 aa16.49■□□□□ 0.23
RACGAP1-209ENST00000547905 CARMIL1Q5VZK9 1371 aa16.47■□□□□ 0.23
RACGAP1-209ENST00000547905 MADDQ8WXG6 1647 aa16.46■□□□□ 0.23
RACGAP1-209ENST00000547905 NEO1Q92859 1461 aa16.45■□□□□ 0.22
RACGAP1-209ENST00000547905 POGZQ7Z3K3 1410 aa16.43■□□□□ 0.22
RACGAP1-209ENST00000547905 KIAA0556O60303 1618 aa16.42■□□□□ 0.22
RACGAP1-209ENST00000547905 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
RACGAP1-209ENST00000547905 YEATS2Q9ULM3 1422 aa16.37■□□□□ 0.21
RACGAP1-209ENST00000547905 ABCA8O94911 1581 aa16.37■□□□□ 0.21
RACGAP1-209ENST00000547905 RIMS1Q86UR5 1692 aaKnown RBP16.37■□□□□ 0.21
RACGAP1-209ENST00000547905 GOLGA3Q08378 1498 aa16.36■□□□□ 0.21
RACGAP1-209ENST00000547905 ABCA9Q8IUA7 1624 aa16.36■□□□□ 0.21
RACGAP1-209ENST00000547905 ARHGEF40Q8TER5 1519 aa16.35■□□□□ 0.21
RACGAP1-209ENST00000547905 PTPRTO14522 1441 aa16.35■□□□□ 0.21
RACGAP1-209ENST00000547905 FANCAO15360 1455 aa16.35■□□□□ 0.21
RACGAP1-209ENST00000547905 ARID4BQ4LE39 1312 aaPredicted RBP16.34■□□□□ 0.21
RACGAP1-209ENST00000547905 HSPA2P54652 639 aa16.33■□□□□ 0.2
RACGAP1-209ENST00000547905 KCNH8Q96L42 1107 aa16.32■□□□□ 0.2
RACGAP1-209ENST00000547905 FAM9AQ8IZU1 332 aaPredicted RBP16.31■□□□□ 0.2
RACGAP1-209ENST00000547905 TTC37Q6PGP7 1564 aa16.31■□□□□ 0.2
RACGAP1-209ENST00000547905 AKNAQ7Z591 1439 aa16.3■□□□□ 0.2
RACGAP1-209ENST00000547905 FRMPD1Q5SYB0 1578 aa16.3■□□□□ 0.2
RACGAP1-209ENST00000547905 PREX1Q8TCU6 1659 aa16.29■□□□□ 0.2
RACGAP1-209ENST00000547905 MAGI2Q86UL8 1455 aa16.29■□□□□ 0.2
RACGAP1-209ENST00000547905 FHOD3Q2V2M9 1422 aa16.28■□□□□ 0.2
RACGAP1-209ENST00000547905 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
RACGAP1-209ENST00000547905 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
RACGAP1-209ENST00000547905 RAPGEF3O95398 923 aa16.24■□□□□ 0.19
RACGAP1-209ENST00000547905 EFCAB5A4FU69 1503 aa16.24■□□□□ 0.19
RACGAP1-209ENST00000547905 DENND4BO75064 1496 aaPredicted RBP16.24■□□□□ 0.19
RACGAP1-209ENST00000547905 CFAP74Q9C0B2 1584 aa16.22■□□□□ 0.19
RACGAP1-209ENST00000547905 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
RACGAP1-209ENST00000547905 STRCQ7RTU9 1775 aa16.2■□□□□ 0.18
RACGAP1-209ENST00000547905 FER1L4A9Z1Z3 1794 aa16.19■□□□□ 0.18
RACGAP1-209ENST00000547905 ARHGEF12Q9NZN5 1544 aa16.18■□□□□ 0.18
RACGAP1-209ENST00000547905 RICTORQ6R327 1708 aa16.18■□□□□ 0.18
RACGAP1-209ENST00000547905 ATP10BO94823 1461 aa16.17■□□□□ 0.18
RACGAP1-209ENST00000547905 ZFYVE16Q7Z3T8 1539 aa16.17■□□□□ 0.18
RACGAP1-209ENST00000547905 UHRF1BP1Q6BDS2 1440 aa16.17■□□□□ 0.18
RACGAP1-209ENST00000547905 SETD1BQ9UPS6 1966 aaKnown RBP16.16■□□□□ 0.18
RACGAP1-209ENST00000547905 CTTNBP2Q8WZ74 1663 aa16.12■□□□□ 0.17
RACGAP1-209ENST00000547905 ATP10AO60312 1499 aa16.08■□□□□ 0.17
RACGAP1-209ENST00000547905 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
RACGAP1-209ENST00000547905 MED1Q15648 1581 aaPredicted RBP16.04■□□□□ 0.16
RACGAP1-209ENST00000547905 NCOA1Q15788 1441 aa16.04■□□□□ 0.16
RACGAP1-209ENST00000547905 SIGLEC1Q9BZZ2 1709 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms