RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 RUSC2Q8N2Y8 1516 aa14.8□□□□□ -0.04
PTCH1-214ENST00000547615 ABCC10Q5T3U5 1492 aa14.79□□□□□ -0.04
PTCH1-214ENST00000547615 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
PTCH1-214ENST00000547615 DIP2BQ9P265 1576 aa14.75□□□□□ -0.05
PTCH1-214ENST00000547615 KDM6BO15054 1643 aa14.74□□□□□ -0.05
PTCH1-214ENST00000547615 CUL7Q14999 1698 aa14.71□□□□□ -0.05
PTCH1-214ENST00000547615 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.05
PTCH1-214ENST00000547615 KIAA0586Q9BVV6 1533 aa14.69□□□□□ -0.06
PTCH1-214ENST00000547615 ADCY10Q96PN6 1610 aa14.69□□□□□ -0.06
PTCH1-214ENST00000547615 SUPT5HO00267 1087 aaKnown RBP14.65□□□□□ -0.06
PTCH1-214ENST00000547615 CARMIL2Q6F5E8 1435 aa14.62□□□□□ -0.07
PTCH1-214ENST00000547615 KIF27Q86VH2 1401 aa14.62□□□□□ -0.07
PTCH1-214ENST00000547615 PLB1Q6P1J6 1458 aa14.59□□□□□ -0.07
PTCH1-214ENST00000547615 GLI2P10070 1586 aa14.58□□□□□ -0.08
PTCH1-214ENST00000547615 TSPOAP1O95153 1857 aa14.58□□□□□ -0.08
PTCH1-214ENST00000547615 ABCC2Q92887 1545 aa14.57□□□□□ -0.08
PTCH1-214ENST00000547615 PTPRGP23470 1445 aa14.57□□□□□ -0.08
PTCH1-214ENST00000547615 TNIKQ9UKE5 1360 aa14.55□□□□□ -0.08
PTCH1-214ENST00000547615 UHRF1BP1LA0JNW5 1464 aa14.54□□□□□ -0.08
PTCH1-214ENST00000547615 IQGAP2Q13576 1575 aa14.53□□□□□ -0.08
PTCH1-214ENST00000547615 TEX14Q8IWB6 1497 aa14.53□□□□□ -0.08
PTCH1-214ENST00000547615 IGF1RP08069 1367 aa14.53□□□□□ -0.08
PTCH1-214ENST00000547615 KDM4FA0A1W2PPD8 638 aa14.51□□□□□ -0.09
PTCH1-214ENST00000547615 ASXL2Q76L83 1435 aa14.49□□□□□ -0.09
PTCH1-214ENST00000547615 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
PTCH1-214ENST00000547615 PPRC1Q5VV67 1664 aaKnown RBP14.47□□□□□ -0.09
PTCH1-214ENST00000547615 UACAQ9BZF9 1416 aa14.47□□□□□ -0.09
PTCH1-214ENST00000547615 MAP3K4Q9Y6R4 1608 aa14.46□□□□□ -0.09
PTCH1-214ENST00000547615 ADGRL1O94910 1474 aa14.45□□□□□ -0.1
PTCH1-214ENST00000547615 KDM5BQ9UGL1 1544 aa14.44□□□□□ -0.1
PTCH1-214ENST00000547615 EPRSP07814 1512 aaKnown RBP14.42□□□□□ -0.1
PTCH1-214ENST00000547615 UGGT2Q9NYU1 1516 aa14.41□□□□□ -0.1
PTCH1-214ENST00000547615 ZCCHC11Q5TAX3 1644 aaKnown RBP14.4□□□□□ -0.1
PTCH1-214ENST00000547615 DISP1Q96F81 1524 aa14.39□□□□□ -0.11
PTCH1-214ENST00000547615 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
PTCH1-214ENST00000547615 CFAP43Q8NDM7 1665 aa14.37□□□□□ -0.11
PTCH1-214ENST00000547615 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-214ENST00000547615 RAPGEF2Q9Y4G8 1499 aa14.37□□□□□ -0.11
PTCH1-214ENST00000547615 WDR7Q9Y4E6 1490 aa14.36□□□□□ -0.11
PTCH1-214ENST00000547615 HECW2Q9P2P5 1572 aa14.35□□□□□ -0.11
PTCH1-214ENST00000547615 GOLGA3Q08378 1498 aa14.35□□□□□ -0.11
PTCH1-214ENST00000547615 TTBK1Q5TCY1 1321 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-214ENST00000547615 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.12
PTCH1-214ENST00000547615 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-214ENST00000547615 CTTNBP2Q8WZ74 1663 aa14.32□□□□□ -0.12
PTCH1-214ENST00000547615 COL17A1Q9UMD9 1497 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-214ENST00000547615 CD109Q6YHK3 1445 aa14.27□□□□□ -0.12
PTCH1-214ENST00000547615 PHLDB1Q86UU1 1377 aa14.26□□□□□ -0.13
PTCH1-214ENST00000547615 ABCA8O94911 1581 aa14.24□□□□□ -0.13
PTCH1-214ENST00000547615 ARAP3Q8WWN8 1544 aa14.22□□□□□ -0.13
PTCH1-214ENST00000547615 KIF21BO75037 1637 aa14.19□□□□□ -0.14
PTCH1-214ENST00000547615 ABCA9Q8IUA7 1624 aa14.16□□□□□ -0.14
PTCH1-214ENST00000547615 FBXO41Q8TF61 875 aa14.15□□□□□ -0.14
PTCH1-214ENST00000547615 NEO1Q92859 1461 aa14.14□□□□□ -0.15
PTCH1-214ENST00000547615 KCNH8Q96L42 1107 aa14.13□□□□□ -0.15
PTCH1-214ENST00000547615 ADAMTSL3P82987 1691 aa14.12□□□□□ -0.15
PTCH1-214ENST00000547615 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
PTCH1-214ENST00000547615 PTPRMP28827 1452 aa14.11□□□□□ -0.15
PTCH1-214ENST00000547615 CFAP74Q9C0B2 1584 aa14.1□□□□□ -0.15
PTCH1-214ENST00000547615 BCORL1Q5H9F3 1711 aa14.08□□□□□ -0.16
PTCH1-214ENST00000547615 PCF11O94913 1555 aaKnown RBP14.08□□□□□ -0.16
PTCH1-214ENST00000547615 RAPGEF6Q8TEU7 1601 aa14.07□□□□□ -0.16
PTCH1-214ENST00000547615 ATP10BO94823 1461 aa14.06□□□□□ -0.16
PTCH1-214ENST00000547615 SAMD9Q5K651 1589 aa14.06□□□□□ -0.16
PTCH1-214ENST00000547615 POGZQ7Z3K3 1410 aa14.05□□□□□ -0.16
PTCH1-214ENST00000547615 ARHGEF40Q8TER5 1519 aa14.05□□□□□ -0.16
PTCH1-214ENST00000547615 MADDQ8WXG6 1647 aa14.03□□□□□ -0.16
PTCH1-214ENST00000547615 FANCAO15360 1455 aa14.02□□□□□ -0.16
PTCH1-214ENST00000547615 FRMPD1Q5SYB0 1578 aa14□□□□□ -0.17
PTCH1-214ENST00000547615 EFCAB5A4FU69 1503 aa14□□□□□ -0.17
PTCH1-214ENST00000547615 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-214ENST00000547615 ARID4BQ4LE39 1312 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-214ENST00000547615 ZMYM4Q5VZL5 1548 aa13.99□□□□□ -0.17
PTCH1-214ENST00000547615 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
PTCH1-214ENST00000547615 LMTK3Q96Q04 1460 aa13.99□□□□□ -0.17
PTCH1-214ENST00000547615 AKNAQ7Z591 1439 aa13.98□□□□□ -0.17
PTCH1-214ENST00000547615 RICTORQ6R327 1708 aa13.98□□□□□ -0.17
PTCH1-214ENST00000547615 RIMS1Q86UR5 1692 aaKnown RBP13.98□□□□□ -0.17
PTCH1-214ENST00000547615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-214ENST00000547615 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
PTCH1-214ENST00000547615 EEA1Q15075 1411 aa13.97□□□□□ -0.17
PTCH1-214ENST00000547615 FHOD3Q2V2M9 1422 aa13.97□□□□□ -0.17
PTCH1-214ENST00000547615 RAPGEF3O95398 923 aa13.96□□□□□ -0.17
PTCH1-214ENST00000547615 NUP153P49790 1475 aaKnown RBP13.94□□□□□ -0.18
PTCH1-214ENST00000547615 PLEKHD1A6NEE1 506 aa13.94□□□□□ -0.18
PTCH1-214ENST00000547615 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
PTCH1-214ENST00000547615 TTC37Q6PGP7 1564 aa13.92□□□□□ -0.18
PTCH1-214ENST00000547615 ARID3CA6NKF2 412 aa13.91□□□□□ -0.18
PTCH1-214ENST00000547615 FER1L4A9Z1Z3 1794 aa13.91□□□□□ -0.18
PTCH1-214ENST00000547615 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
PTCH1-214ENST00000547615 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
PTCH1-214ENST00000547615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.89□□□□□ -0.19
PTCH1-214ENST00000547615 PREX1Q8TCU6 1659 aa13.88□□□□□ -0.19
PTCH1-214ENST00000547615 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
PTCH1-214ENST00000547615 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
PTCH1-214ENST00000547615 C9orf84Q5VXU9 1444 aa13.84□□□□□ -0.19
PTCH1-214ENST00000547615 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
PTCH1-214ENST00000547615 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.2
PTCH1-214ENST00000547615 PLCH2O75038 1416 aa13.82□□□□□ -0.2
PTCH1-214ENST00000547615 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms